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Previous release (v1)
2025-04-20 10:33:59, GGRNA.v2 : RefSeq release 229 (Mar, 2025)
LOCUS NM_053355 3525 bp mRNA linear ROD 03-APR-2024
DEFINITION Rattus norvegicus inhibitor of nuclear factor kappa B kinase
subunit beta (Ikbkb), mRNA.
ACCESSION NM_053355
VERSION NM_053355.3
KEYWORDS RefSeq; RefSeq Select.
SOURCE Rattus norvegicus (Norway rat)
ORGANISM Rattus norvegicus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
REFERENCE 1 (bases 1 to 3525)
AUTHORS Yang,J., Li,H., Zhang,C. and Zhou,Y.
TITLE Indoxyl sulfate reduces Ito,f by activating ROS/MAPK and NF-kappaB
signaling pathways
JOURNAL JCI Insight 7 (3), e145475 (2022)
PUBMED 35132967
REMARK GeneRIF: Indoxyl sulfate reduces Ito,f by activating ROS/MAPK and
NF-kappaB signaling pathways.
Publication Status: Online-Only
REFERENCE 2 (bases 1 to 3525)
AUTHORS Lee,S., Shin,H.J., Noh,C., Kim,S.I., Ko,Y.K., Lee,S.Y., Lim,C.,
Hong,B., Yang,S.Y., Kim,D.W., Lee,W.H. and Kim,Y.H.
TITLE IKBKB siRNA-Encapsulated Poly (Lactic-co-Glycolic Acid)
Nanoparticles Diminish Neuropathic Pain by Inhibiting Microglial
Activation
JOURNAL Int J Mol Sci 22 (11), 5657 (2021)
PUBMED 34073390
REMARK GeneRIF: IKBKB siRNA-Encapsulated Poly (Lactic-co-Glycolic Acid)
Nanoparticles Diminish Neuropathic Pain by Inhibiting Microglial
Activation.
Publication Status: Online-Only
REFERENCE 3 (bases 1 to 3525)
AUTHORS Li,M., Guo,Q., Cai,H., Wang,H., Ma,Z. and Zhang,X.
TITLE miR-218 regulates diabetic nephropathy via targeting IKK-beta and
modulating NK-kappaB-mediated inflammation
JOURNAL J Cell Physiol 235 (4), 3362-3371 (2020)
PUBMED 31549412
REMARK GeneRIF: miR-218 regulates diabetic nephropathy via targeting
IKK-beta and modulating NK-kappaB-mediated inflammation.
REFERENCE 4 (bases 1 to 3525)
AUTHORS Wei,S.F., Sun,J.J., Zhou,N., Li,X.L., Lin,Y., Zhang,Y.D.,
Zhang,Y.R. and Wu,L.Y.
TITLE Protective effect of RNA interference targeting Ikkbeta on hepatic
fibrosis in rats
JOURNAL J Cell Biochem 120 (11), 18894-18900 (2019)
PUBMED 31297885
REMARK GeneRIF: Protective effect of RNA interference targeting Ikkbeta on
hepatic fibrosis in rats.
REFERENCE 5 (bases 1 to 3525)
AUTHORS Dondelinger,Y., Delanghe,T., Priem,D., Wynosky-Dolfi,M.A.,
Sorobetea,D., Rojas-Rivera,D., Giansanti,P., Roelandt,R.,
Gropengiesser,J., Ruckdeschel,K., Savvides,S.N., Heck,A.J.R.,
Vandenabeele,P., Brodsky,I.E. and Bertrand,M.J.M.
TITLE Serine 25 phosphorylation inhibits RIPK1 kinase-dependent cell
death in models of infection and inflammation
JOURNAL Nat Commun 10 (1), 1729 (2019)
PUBMED 30988283
REMARK Publication Status: Online-Only
REFERENCE 6 (bases 1 to 3525)
AUTHORS Kupfer,R. and Scheinman,R.I.
TITLE Measurement of IKK activity in primary rat T cells: rapid
activation and inactivation
JOURNAL J Immunol Methods 266 (1-2), 155-164 (2002)
PUBMED 12133632
REFERENCE 7 (bases 1 to 3525)
AUTHORS Pasparakis,M., Courtois,G., Hafner,M., Schmidt-Supprian,M.,
Nenci,A., Toksoy,A., Krampert,M., Goebeler,M., Gillitzer,R.,
Israel,A., Krieg,T., Rajewsky,K. and Haase,I.
TITLE TNF-mediated inflammatory skin disease in mice with
epidermis-specific deletion of IKK2
JOURNAL Nature 417 (6891), 861-866 (2002)
PUBMED 12075355
REFERENCE 8 (bases 1 to 3525)
AUTHORS Chang,N.S.
TITLE The non-ankyrin C terminus of Ikappa Balpha physically interacts
with p53 in vivo and dissociates in response to apoptotic stress,
hypoxia, DNA damage, and transforming growth factor-beta 1-mediated
growth suppression
JOURNAL J Biol Chem 277 (12), 10323-10331 (2002)
PUBMED 11799106
REFERENCE 9 (bases 1 to 3525)
AUTHORS Zhang,Y., Sun,S., Chen,W.C., Kaluzhny,Y., Chinnappan,D., Yu,G. and
Ravid,K.
TITLE Repression of AIM-1 kinase mRNA as part of a program of genes
regulated by Mpl ligand
JOURNAL Biochem Biophys Res Commun 282 (3), 844-849 (2001)
PUBMED 11401541
REFERENCE 10 (bases 1 to 3525)
AUTHORS Nemoto,S., DiDonato,J.A. and Lin,A.
TITLE Coordinate regulation of IkappaB kinases by mitogen-activated
protein kinase kinase kinase 1 and NF-kappaB-inducing kinase
JOURNAL Mol Cell Biol 18 (12), 7336-7343 (1998)
PUBMED 9819420
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
JAXUCZ010000016.1.
On Nov 27, 2020 this sequence version replaced NM_053355.2.
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: SRR26360194.432458.1,
SRR26360190.2174589.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
SAMEA5760383, SAMEA5760386
[ECO:0000348]
##Evidence-Data-END##
##RefSeq-Attributes-START##
RefSeq Select criteria :: based on conservation, expression
##RefSeq-Attributes-END##
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-83 JAXUCZ010000016.1 76022031-76022113
84-210 JAXUCZ010000016.1 76022385-76022511
211-305 JAXUCZ010000016.1 76033692-76033786
306-423 JAXUCZ010000016.1 76035155-76035272
424-493 JAXUCZ010000016.1 76037894-76037963
494-582 JAXUCZ010000016.1 76048571-76048659
583-672 JAXUCZ010000016.1 76049647-76049736
673-797 JAXUCZ010000016.1 76053182-76053306
798-905 JAXUCZ010000016.1 76056865-76056972
906-1035 JAXUCZ010000016.1 76059948-76060077
1036-1230 JAXUCZ010000016.1 76060942-76061136
1231-1345 JAXUCZ010000016.1 76061743-76061857
1346-1469 JAXUCZ010000016.1 76064007-76064130
1470-1621 JAXUCZ010000016.1 76064699-76064850
1622-1683 JAXUCZ010000016.1 76064979-76065040
1684-1793 JAXUCZ010000016.1 76066322-76066431
1794-1843 JAXUCZ010000016.1 76067628-76067677
1844-1943 JAXUCZ010000016.1 76067775-76067874
1944-2091 JAXUCZ010000016.1 76068051-76068198
2092-2219 JAXUCZ010000016.1 76070652-76070779
2220-2310 JAXUCZ010000016.1 76073644-76073734
2311-3525 JAXUCZ010000016.1 76074503-76075717
FEATURES Location/Qualifiers
source 1..3525
/organism="Rattus norvegicus"
/mol_type="mRNA"
/strain="BN"
/db_xref="taxon:10116"
/chromosome="16"
/map="16q12.5"
gene 1..3525
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="inhibitor of nuclear factor kappa B kinase subunit
beta"
/db_xref="GeneID:84351"
/db_xref="RGD:621375"
exon 1..83
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
misc_feature 58..60
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="upstream in-frame stop codon"
exon 84..210
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
CDS 106..2379
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/EC_number="2.7.11.1"
/EC_number="2.7.11.10"
/note="IKK-B; NFKBIKB; IKK-beta; I-kappa-B kinase 2;
I-kappa-B-kinase beta; nuclear factor NF-kappa-B inhibitor
kinase beta; inhibitor of nuclear factor kappa B kinase
beta subunit; inhibitor of kappaB kinase beta; inhibitor
of kappa light polypeptide gene enhancer in B-cells,
kinase beta; serine/threonine protein kinase IKBKB"
/codon_start=1
/product="inhibitor of nuclear factor kappa-B kinase
subunit beta"
/protein_id="NP_445807.2"
/db_xref="GeneID:84351"
/db_xref="RGD:621375"
/translation="
MSWSPSLPTQTCGAWEMKERLGTGGFGNVIRWHNQVTGEQIAIKQCRQELSPKNRDRWCLEIQIMRRLNHPNVVAARDVPEGMQNLAPNDLPLLAMEYCQGGDLRRYLNQFENCCGLREGAILTLLSDIASALRYLHENRIIHRDLKPENIVLQQGEKRLIHKIIDLGYAKELDQGSLCTSFVGTLQYLAPELLEQQKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHSKVRQKSEVDIVVSEDLNGTVKFSSSLPFPNNLNSVLAERLEKWLQLMLTWQPRQRGVDPQYGPNGCFRALDDILNLKLVHILNMVTGTIHTYPVMEDESLQSLKTRIREDTGILETDQELLQEAGLVLLPDKPATQCISDSKTNEGLTLDMDLVFLFDNSKMSYETQITPRPQPESVSCVLQEPKRNLSFFQMRKVWGQVWHSIQTLKEDCNRLQQGQRAAMMNLLRNNSCLSKMKNAMASTAQQLKAKLDFFKTSIQIDLEKYREQTEFGITSDKLLLAWREMEQAVEQCGRENDVKVLVERMMALQTDIVDLQRSPMGRKQGGTLDDLEEQARELYRRLREKPRDQRTEGDSQDMVRLLLQAIQSFEKKVRVIYSQLSKTVVCKQKALELLPKVEEVVRLMNEDEKTVVRLQEKRQKELWNLLKIACSKVRGPVSGSPDSMNVSRLSHPGHLMSQPSSACDSLPDSDKKSEELVAEAHALCSRLESALQDTVKQQDRSFTTLDWSWLQMEDEERCGLEQACD"
misc_feature 163..1032
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Catalytic domain of the Serine/Threonine kinase,
Inhibitor of Nuclear Factor-KappaB Kinase (IKK) beta;
Region: STKc_IKK_beta; cd14038"
/db_xref="CDD:270940"
misc_feature order(166..180,190..192,229..231,235..237,325..327,
391..402,412..414,418..420,538..540,544..546,550..555,
559..561,601..603,610..612,655..666)
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="active site"
/db_xref="CDD:270940"
misc_feature order(166..180,190..192,229..231,235..237,325..327,
391..402,412..414,538..540,544..546,550..555,559..561,
601..603)
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:270940"
misc_feature order(178..180,412..414,418..420,538..540,544..546,
550..552,610..612,655..666)
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="polypeptide substrate binding site [polypeptide
binding]; other site"
/db_xref="CDD:270940"
misc_feature order(430..432,436..438,445..450,457..459,760..762,
775..777,859..864,868..870,886..897)
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="SDD interface [polypeptide binding]; other site"
/db_xref="CDD:270940"
misc_feature order(466..468,472..477,577..582)
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="ULD interface [polypeptide binding]; other site"
/db_xref="CDD:270940"
misc_feature 598..666
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="activation loop (A-loop); other site"
/db_xref="CDD:270940"
misc_feature 634..636
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Phosphoserine, by TBK1 and PKC/PRKCZ.
/evidence=ECO:0000250|UniProtKB:O14920; propagated from
UniProtKB/Swiss-Prot (Q9QY78.1); phosphorylation site"
misc_feature 646..648
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Phosphoserine, by TBK1, PKC/PRKCZ and PDPK1.
/evidence=ECO:0000250|UniProtKB:O14920; propagated from
UniProtKB/Swiss-Prot (Q9QY78.1); phosphorylation site"
misc_feature 676..678
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Hydroxyproline. /evidence=ECO:0000250; propagated
from UniProtKB/Swiss-Prot (Q9QY78.1); hydroxylation site"
misc_feature order(790..792,796..801,811..813)
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="tetramer interface [polypeptide binding]; other
site"
/db_xref="CDD:270940"
misc_feature 1033..1275
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="ubiquitin-like (Ubl) domain found in inhibitor of
nuclear factor kappa-B kinases, IKK-alpha and IKK-beta,
and similar proteins; Region: Ubl_IKKA_like; cd17046"
/db_xref="CDD:340566"
misc_feature 1270..2094
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="IQBAL scaffold dimerization domain; Region:
IKBKB_SDD; pfam18397"
/db_xref="CDD:465745"
misc_feature 1477..1542
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="propagated from UniProtKB/Swiss-Prot (Q9QY78.1);
Region: Leucine-zipper"
misc_feature 2113..2115
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Phosphoserine, by autocatalysis.
/evidence=ECO:0000250|UniProtKB:O14920; propagated from
UniProtKB/Swiss-Prot (Q9QY78.1); phosphorylation site"
misc_feature 2119..2121
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Phosphoserine.
/evidence=ECO:0007744|PubMed:22673903; propagated from
UniProtKB/Swiss-Prot (Q9QY78.1); phosphorylation site"
misc_feature 2128..2130
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Phosphoserine, by autocatalysis.
/evidence=ECO:0000250|UniProtKB:O14920; propagated from
UniProtKB/Swiss-Prot (Q9QY78.1); phosphorylation site"
misc_feature 2149..2214
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="propagated from UniProtKB/Swiss-Prot (Q9QY78.1);
Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
misc_feature 2149..2151
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Phosphoserine, by autocatalysis.
/evidence=ECO:0000250|UniProtKB:O14920; propagated from
UniProtKB/Swiss-Prot (Q9QY78.1); phosphorylation site"
misc_feature 2170..2172
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Phosphoserine, by autocatalysis.
/evidence=ECO:0000250|UniProtKB:O14920; propagated from
UniProtKB/Swiss-Prot (Q9QY78.1); phosphorylation site"
misc_feature 2179..2181
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Phosphoserine, by autocatalysis.
/evidence=ECO:0000250|UniProtKB:O14920; propagated from
UniProtKB/Swiss-Prot (Q9QY78.1); phosphorylation site"
misc_feature 2194..2196
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Phosphoserine, by autocatalysis.
/evidence=ECO:0000250|UniProtKB:O14920; propagated from
UniProtKB/Swiss-Prot (Q9QY78.1); phosphorylation site"
misc_feature 2218..2220
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Phosphoserine, by autocatalysis.
/evidence=ECO:0000250|UniProtKB:O14920; propagated from
UniProtKB/Swiss-Prot (Q9QY78.1); phosphorylation site"
misc_feature 2221..2331
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="I-kappa-kinase-beta NEMO binding domain; Region:
IKKbetaNEMObind; pfam12179"
/db_xref="CDD:463485"
misc_feature 2302..2304
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Phosphoserine, by autocatalysis.
/evidence=ECO:0000250|UniProtKB:O14920; propagated from
UniProtKB/Swiss-Prot (Q9QY78.1); phosphorylation site"
misc_feature 2314..2331
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="propagated from UniProtKB/Swiss-Prot (Q9QY78.1);
Region: NEMO-binding"
misc_feature 2323..2325
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/note="Phosphoserine, by autocatalysis.
/evidence=ECO:0000250|UniProtKB:O14920; propagated from
UniProtKB/Swiss-Prot (Q9QY78.1); phosphorylation site"
exon 211..305
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 306..423
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 424..493
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 494..582
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 583..672
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 673..797
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 798..905
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 906..1035
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 1036..1230
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 1231..1345
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 1346..1469
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 1470..1621
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 1622..1683
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 1684..1793
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 1794..1843
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 1844..1943
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 1944..2091
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 2092..2219
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 2220..2310
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
exon 2311..3525
/gene="Ikbkb"
/gene_synonym="AIM-1; IKK2"
/inference="alignment:Splign:2.1.0"
ORIGIN
tggcgctgagctggctgcgtggggaccccgagttttcatgtcctcagcgggtgtcgctagcggccccgcggcccccggggcagagttagcagggagggcatcgatatgagctggtcaccttctctcccaacccagacatgtggggcctgggaaatgaaagaacgcctcggaactgggggatttggaaacgtcatccggtggcacaatcaggtgacaggtgaacaaattgccatcaagcaatgccgacaggagctcagccccaagaaccgcgatcgctggtgcctagagatccagatcatgagaaggctgaaccatcccaacgtggtggccgcccgggatgtcccagaggggatgcagaacttggcacccaatgatttgcctctgctggccatggagtactgccaaggaggagacctccggagatacttgaaccagttcgaaaactgctgtggcctccgggaaggagccatcctcaccctgctgagtgacatagcatcggctcttagataccttcatgaaaacagaatcatccaccgggacctgaagccagagaacattgtcctacagcaaggagagaaaagattaatacacaaaattattgatctaggatatgccaaggagctggatcagggcagtctgtgcacgtcatttgtggggaccctgcaatacctggccccagagcttctggagcagcagaagtacaccgtgactgttgactactggagcttcggcaccctggcctttgaatgcatcaccggcttccggccctttctccctaactggcagcctgtgcagtggcactctaaagtccggcagaagagcgaagtggacattgttgttagcgaggacttgaacggaacagtgaagttctcaagttccttacccttccccaataatctcaacagtgtcctggctgagcgtctggagaagtggcttcagctgatgctcacgtggcaacctcggcaaaggggcgtggacccccagtacggtcccaatggctgtttcagggccctcgatgacatcttgaacttaaagctggttcatatcttgaacatggtcacaggcaccattcacacataccctgtgatggaggatgaaagtctgcagagcttaaaaaccagaatccgggaagacacagggatcctggagacagaccaggaactgctgcaggaggcagggctggtgctgctccctgacaagcctgctactcagtgcatctcagacagcaagacaaatgagggcctcacactggacatggatctcgtctttctctttgacaacagtaaaatgtcctatgagactcagatcaccccccgaccccaacctgagagcgtcagctgtgtccttcaggagcccaagcggaacctctccttcttccagatgaggaaagtgtggggccaagtctggcacagcatccaaacgctgaaggaagactgtaaccggctgcagcagggacagcgagctgccatgatgaacctccttcggaataacagctgcctctccaagatgaagaatgccatggcctccacggcgcagcagctcaaggccaagttggacttcttcaaaaccagcatccagattgacctggagaagtacagggagcagacggagtttggcatcacatcggacaaactgctgctggcctggcgggaaatggagcaggccgtggagcagtgtgggcgggagaatgacgtgaaggtcctggtagaacggatgatggcactgcagaccgacattgtggacctacagaggagcccgatgggtcggaagcaggggggcaccttggatgacctagaggaacaagcaagagaactctacagaagactcagggagaagccaagagaccaaaggacagaaggtgacagccaggatatggtacggctgctgctgcaagccatccagagcttcgagaagaaagtgcgggtgatttactctcagctcagtaagaccgtggtttgtaagcagaaggccctggagctgctgcccaaagtagaagaggtggtgaggctcatgaacgaggatgagaagactgtggtccggctccaggagaagcggcagaaggagctctggaacctcctgaagatcgcctgtagcaaagtccgaggtccggtgagtggaagcccagatagcatgaatgtgtctcgacttagtcaccctggtcatctaatgtcccagccttccagtgcctgtgacagcttacctgattcagacaagaaaagtgaagaactggtggccgaagcacacgccctctgctcccggctggaaagcgcgctgcaggacacggtgaagcagcaggaccgaagcttcacgaccctagactggagctggttacagatggaggatgaagaaaggtgtggcctggagcaggcctgtgactgaggtgcccgtgaactggcccgcggctcggcatgtgaggatgctctggtacctccagggggacatcccgctctcctggcagctgcgatccttgcccacagcagcctgtgctggcccagtctacacactggacgtcctccaccacagaagcacaacaatgtcagttacaagcccgtgcggcaacaagactgcagtgctgctacacaaagagcttacgacagacgtctaccttgagtgtttccagacagcagccagcctgtcccctttggactgctgcgggggagggagccctgccctcctcgcctttcagctggggtgtcatctggatccagcttccttagacatttaatcagaagcctgatgattctacgtctttcttcctcttcacttccccctggtaaatgtttctaccttctgtgccggtcgttgtggcaaacggcctttgactaagttgtaatgacggtgataccaagctccctgatgtcccggctcctttaagccacagagcgacttacacagccaggcagaacagaaatgcagctacacatcctgagtcccaaagattacctggagtcaactgtcatggagagaaatggaagatgaaggtcctacaccagcccctcccctgctgagcactgtgtgactctgccacctgtcaggtgtgtgaggacgttgctgcctctcacataagctagcagcgttattaaactggttcgttttataaatagtttctattttttgtaacattactcagatatgtatcctaggctcaagggtgtatttccacagtaatactaccactagtacttctgagctcagagggcaacatcatgggaaatttcgtaagattgaacagcgtatctagatcatgtcatttttacatcacacaaaacttgtgtgtttgcgtgcatatgtgtgtatgaaagcgaagcaggctcagattgtcataaacaggtttatttgattagagaataaagttggaacagagaaatgtcagagcggccaccgcagacacagtatgaagcgtcactggtcacgtgagctcagcggtgctgcatgctttctttcccagagattgatgctgtgcactgggaacctgtttgaaaactccgacaataaagatgctggcttaagctcagcgtaaattca
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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