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Previous release (v1)
2026-05-14 04:04:08, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS NM_001427215 6304 bp mRNA linear ROD 09-APR-2024
DEFINITION Rattus norvegicus dicer 1 ribonuclease III (Dicer1), mRNA.
ACCESSION NM_001427215 XM_008764904
VERSION NM_001427215.1
KEYWORDS RefSeq; RefSeq Select.
SOURCE Rattus norvegicus (Norway rat)
ORGANISM Rattus norvegicus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
REFERENCE 1 (bases 1 to 6304)
AUTHORS Pidikova,P., Chovancova,B., Mravec,B. and Herichova,I.
TITLE The 24-h pattern of dgcr8, drosha, and dicer expression in the rat
suprachiasmatic nuclei and peripheral tissues and its modulation by
angiotensin II
JOURNAL Gen Physiol Biophys 41 (5), 417-430 (2022)
PUBMED 36222340
REMARK GeneRIF: The 24-h pattern of dgcr8, drosha, and dicer expression in
the rat suprachiasmatic nuclei and peripheral tissues and its
modulation by angiotensin II.
REFERENCE 2 (bases 1 to 6304)
AUTHORS Ding,Y., He,P. and Li,Z.
TITLE MicroRNA-9119 regulates cell viability of granulosa cells in
polycystic ovarian syndrome via mediating Dicer expression
JOURNAL Mol Cell Biochem 465 (1-2), 187-197 (2020)
PUBMED 31894528
REMARK GeneRIF: granulosa cells (GCs) of PCOS, the expression of miR-9119,
and targeted NFkappaB/p65-DICER axis are upregulated in order to
maintain cell viability and prevent apoptosis, thereby promoting
Anti-Mullerian hormone production in GCs.
REFERENCE 3 (bases 1 to 6304)
AUTHORS Kim,J., Lee,J., Oh,J.H., Chang,H.J., Sohn,D.K., Kwon,O., Shin,A.
and Kim,J.
TITLE Dietary Lutein Plus Zeaxanthin Intake and DICER1 rs3742330 A > G
Polymorphism Relative to Colorectal Cancer Risk
JOURNAL Sci Rep 9 (1), 3406 (2019)
PUBMED 30833603
REMARK Publication Status: Online-Only
REFERENCE 4 (bases 1 to 6304)
AUTHORS Antoniou,A., Khudayberdiev,S., Idziak,A., Bicker,S., Jacob,R. and
Schratt,G.
TITLE The dynamic recruitment of TRBP to neuronal membranes mediates
dendritogenesis during development
JOURNAL EMBO Rep 19 (3) (2018)
PUBMED 29263199
REFERENCE 5 (bases 1 to 6304)
AUTHORS Beltrami,C., Besnier,M., Shantikumar,S., Shearn,A.I.,
Rajakaruna,C., Laftah,A., Sessa,F., Spinetti,G., Petretto,E.,
Angelini,G.D. and Emanueli,C.
TITLE Human Pericardial Fluid Contains Exosomes Enriched with
Cardiovascular-Expressed MicroRNAs and Promotes Therapeutic
Angiogenesis
JOURNAL Mol Ther 25 (3), 679-693 (2017)
PUBMED 28159509
REFERENCE 6 (bases 1 to 6304)
AUTHORS Doi,N., Zenno,S., Ueda,R., Ohki-Hamazaki,H., Ui-Tei,K. and Saigo,K.
TITLE Short-interfering-RNA-mediated gene silencing in mammalian cells
requires Dicer and eIF2C translation initiation factors
JOURNAL Curr Biol 13 (1), 41-46 (2003)
PUBMED 12526743
REFERENCE 7 (bases 1 to 6304)
AUTHORS Zhang,H., Kolb,F.A., Brondani,V., Billy,E. and Filipowicz,W.
TITLE Human Dicer preferentially cleaves dsRNAs at their termini without
a requirement for ATP
JOURNAL EMBO J 21 (21), 5875-5885 (2002)
PUBMED 12411505
REFERENCE 8 (bases 1 to 6304)
AUTHORS Provost,P., Dishart,D., Doucet,J., Frendewey,D., Samuelsson,B. and
Radmark,O.
TITLE Ribonuclease activity and RNA binding of recombinant human Dicer
JOURNAL EMBO J 21 (21), 5864-5874 (2002)
PUBMED 12411504
REFERENCE 9 (bases 1 to 6304)
AUTHORS Hutvagner,G., McLachlan,J., Pasquinelli,A.E., Balint,E., Tuschl,T.
and Zamore,P.D.
TITLE A cellular function for the RNA-interference enzyme Dicer in the
maturation of the let-7 small temporal RNA
JOURNAL Science 293 (5531), 834-838 (2001)
PUBMED 11452083
REFERENCE 10 (bases 1 to 6304)
AUTHORS Bernstein,E., Caudy,A.A., Hammond,S.M. and Hannon,G.J.
TITLE Role for a bidentate ribonuclease in the initiation step of RNA
interference
JOURNAL Nature 409 (6818), 363-366 (2001)
PUBMED 11201747
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
JAXUCZ010000006.1.
On Jan 12, 2024 this sequence version replaced XM_008764904.3.
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
RNAseq introns :: mixed sample support SAMEA5760383, SAMEA5760386
[ECO:0006172]
##Evidence-Data-END##
##RefSeq-Attributes-START##
RefSeq Select criteria :: based on conservation, longest protein
##RefSeq-Attributes-END##
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-346 JAXUCZ010000006.1 129456907-129457252 c
347-534 JAXUCZ010000006.1 129437833-129438020 c
535-697 JAXUCZ010000006.1 129437028-129437190 c
698-828 JAXUCZ010000006.1 129436125-129436255 c
829-963 JAXUCZ010000006.1 129435093-129435227 c
964-1124 JAXUCZ010000006.1 129434315-129434475 c
1125-1293 JAXUCZ010000006.1 129429002-129429170 c
1294-1766 JAXUCZ010000006.1 129427109-129427581 c
1767-1899 JAXUCZ010000006.1 129420778-129420910 c
1900-2142 JAXUCZ010000006.1 129418797-129419039 c
2143-2297 JAXUCZ010000006.1 129417991-129418145 c
2298-2430 JAXUCZ010000006.1 129416422-129416554 c
2431-2506 JAXUCZ010000006.1 129415573-129415648 c
2507-2646 JAXUCZ010000006.1 129414607-129414746 c
2647-2826 JAXUCZ010000006.1 129412744-129412923 c
2827-3040 JAXUCZ010000006.1 129412431-129412644 c
3041-3194 JAXUCZ010000006.1 129412099-129412252 c
3195-3377 JAXUCZ010000006.1 129411054-129411236 c
3378-3483 JAXUCZ010000006.1 129410718-129410823 c
3484-3659 JAXUCZ010000006.1 129410074-129410249 c
3660-4440 JAXUCZ010000006.1 129408424-129409204 c
4441-4596 JAXUCZ010000006.1 129405035-129405190 c
4597-5473 JAXUCZ010000006.1 129400849-129401725 c
5474-5742 JAXUCZ010000006.1 129398952-129399220 c
5743-5905 JAXUCZ010000006.1 129396815-129396977 c
5906-5981 JAXUCZ010000006.1 129396639-129396714 c
5982-6304 JAXUCZ010000006.1 129396014-129396336 c
FEATURES Location/Qualifiers
source 1..6304
/organism="Rattus norvegicus"
/mol_type="mRNA"
/strain="BN"
/db_xref="taxon:10116"
/chromosome="6"
/map="6q32"
gene 1..6304
/gene="Dicer1"
/note="dicer 1 ribonuclease III"
/db_xref="GeneID:299284"
/db_xref="RGD:1309381"
exon 1..346
/gene="Dicer1"
/inference="alignment:Splign:2.1.0"
exon 347..534
/gene="Dicer1"
/inference="alignment:Splign:2.1.0"
misc_feature 388..390
/gene="Dicer1"
/note="upstream in-frame stop codon"
CDS 391..6147
/gene="Dicer1"
/EC_number="3.1.26.3"
/note="Dicer1, Dcr-1 homolog; dicer 1, ribonuclease type
III"
/codon_start=1
/product="endoribonuclease Dicer"
/protein_id="NP_001414144.1"
/db_xref="GeneID:299284"
/db_xref="RGD:1309381"
/translation="
MKSPALQPLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELAHQIRGDLSPHAKRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSNLEVNASWTKERWSQEFTKHQVLIMTCYVALNVLKNGYLSLSDINLLVFDECHLAILDHPYREIMKLCDSCPSCPRILGLTASILNGKCDPDELEEKIQKLEKILKSGAETATDLVVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEEALDFINDCNVSVHSKERDSTLISKQILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTLLRKIHALCEEYFSPASLDLKYVTPKVMKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDDDEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRSKQMEAEFRKQEEVLRKFRAHETNLLIATSVVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDGAEADVHAVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPDGTFYSTLYLPINSPLRASIVGPPMGCVRLAERVVALICCEKLHKIGELDEHLMPVGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRESYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSQQMLELVTRLHQYIFSHILRLEKPALEFQPAGAESAYCVLPLNVVNDSSTLDIDFKFMEDIEKSEARIGIPSTKYSKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGVGVRSLPADFRYPNLDFGWKKSIDSKSFISTCNSSLAESDNYCKHSTTVVPENAAHQGATRPSLENHDQMSVNCKRLPAESPAKLQSEVSVDLTAINGLSYNKSLANGSYDLVNRDFCQGNQLTYFKQEIPVQPTTSYPIQNLYNYENQPTPSNECPLLSNKYLDGNANTSTSDGSPAGSPRPAMMTAVEALEGRTDSEQSPSVGHSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKQGLPSRMVVSIFDPPVNWLPPGYVVNQDKSNSEKWEKDEMTKDCLLANGKLGEDCEEEEEEELAWRAPKEEAEYEDDLLEYDQEHIQFIDSMLMGSGAFVKKIPLSPFSTSDSAYEWKMPKKASLGSVPFSSDLEDFDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSRDKASYPAQENSSSQQKSPSGSCAAAVSPRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYIFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEVVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPLVPNS"
misc_feature 514..1107
/gene="Dicer1"
/note="DEXH-box helicase domain of endoribonuclease Dicer;
Region: DEXHc_dicer; cd18034"
/db_xref="CDD:350792"
misc_feature order(514..525,532..534,583..606,727..729,916..918,
1009..1011)
/gene="Dicer1"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:350792"
misc_feature order(691..696,763..768,841..843,847..852,859..861,
934..942)
/gene="Dicer1"
/note="nucleic acid binding site [nucleotide binding];
other site"
/db_xref="CDD:350792"
misc_feature 1201..1485
/gene="Dicer1"
/note="Partner-binding domain of the endoribonuclease
Dicer; Region: Dicer_PBD; cd15903"
/db_xref="CDD:277191"
misc_feature order(1216..1221,1228..1230,1234..1239,1414..1419,
1426..1431,1438..1440,1447..1452,1459..1461)
/gene="Dicer1"
/note="Trbp binding interface [polypeptide binding]; other
site"
/db_xref="CDD:277191"
misc_feature 1504..2082
/gene="Dicer1"
/note="C-terminal helicase domain of the endoribonuclease
Dicer; Region: SF2_C_dicer; cd18802"
/db_xref="CDD:350189"
misc_feature order(1735..1743,1951..1953,2008..2010,2014..2016)
/gene="Dicer1"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:350189"
misc_feature order(1963..1965,1969..1971,2044..2046,2050..2052)
/gene="Dicer1"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:350189"
misc_feature 2278..2544
/gene="Dicer1"
/note="Dicer dimerization domain; Region: Dicer_dimer;
pfam03368"
/db_xref="CDD:460900"
misc_feature 3046..3414
/gene="Dicer1"
/note="PAZ domain, dicer_like subfamily. Dicer is an RNAse
involved in cleaving dsRNA in the RNA interference
pathway. It generates dsRNAs which are approximately 20 bp
long (siRNAs), which in turn target hydrolysis of
homologous RNAs. PAZ domains are named...; Region:
PAZ_dicer_like; cd02843"
/db_xref="CDD:239209"
misc_feature order(3235..3237,3274..3276,3292..3294,3304..3306,
3358..3360,3382..3384,3388..3390)
/gene="Dicer1"
/note="nucleic acid-binding interface [nucleotide
binding]; other site"
/db_xref="CDD:239209"
misc_feature 4276..>4551
/gene="Dicer1"
/note="Ribonuclease III family; Region: RIBOc; smart00535"
/db_xref="CDD:197778"
misc_feature order(4327..4332,4339..4344,4351..4353,4360..4365,
4372..4377,4381..4389,4417..4419)
/gene="Dicer1"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238333"
misc_feature 5422..5916
/gene="Dicer1"
/note="Ribonuclease III C terminal domain. This group
consists of eukaryotic, bacterial and archeal ribonuclease
III (RNAse III) proteins. RNAse III is a double stranded
RNA-specific endonuclease. Prokaryotic RNAse III is
important in post-transcriptional...; Region: RIBOc;
cd00593"
/db_xref="CDD:238333"
misc_feature order(5482..5487,5494..5499,5506..5508,5515..5520,
5527..5532,5536..5544,5572..5574,5836..5838,5869..5871)
/gene="Dicer1"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238333"
misc_feature order(5482..5484,5491..5493,5503..5505,5806..5808,
5815..5817)
/gene="Dicer1"
/note="active site"
/db_xref="CDD:238333"
misc_feature order(5491..5493,5806..5808,5815..5817)
/gene="Dicer1"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:238333"
misc_feature 5929..6117
/gene="Dicer1"
/note="double-stranded RNA binding motif of
endoribonuclease Dicer and similar proteins; Region:
DSRM_DICER; cd10843"
/db_xref="CDD:380680"
misc_feature order(5929..5934,5938..5943,5950..5955,5962..5967,
5977..5979,5992..6000,6004..6006,6010..6012,6061..6072,
6079..6081)
/gene="Dicer1"
/note="putative RNA binding site [nucleotide binding];
other site"
/db_xref="CDD:380680"
exon 535..697
/gene="Dicer1"
/inference="alignment:Splign:2.1.0"
exon 698..828
/gene="Dicer1"
/inference="alignment:Splign:2.1.0"
exon 829..963
/gene="Dicer1"
/inference="alignment:Splign:2.1.0"
exon 964..1124
/gene="Dicer1"
/inference="alignment:Splign:2.1.0"
exon 1125..1293
/gene="Dicer1"
/inference="alignment:Splign:2.1.0"
exon 1294..1766
/gene="Dicer1"
/inference="alignment:Splign:2.1.0"
exon 1767..1899
/gene="Dicer1"
/inference="alignment:Splign:2.1.0"
exon 1900..2142
/gene="Dicer1"
/inference="alignment:Splign:2.1.0"
exon 2143..2297
/gene="Dicer1"
/inference="alignment:Splign:2.1.0"
exon 2298..2430
/gene="Dicer1"
/inference="alignment:Splign:2.1.0"
exon 2431..2506
/gene="Dicer1"
/inference="alignment:Splign:2.1.0"
exon 2507..2646
/gene="Dicer1"
/inference="alignment:Splign:2.1.0"
exon 2647..2826
/gene="Dicer1"
/inference="alignment:Splign:2.1.0"
exon 2827..3040
/gene="Dicer1"
/inference="alignment:Splign:2.1.0"
exon 3041..3194
/gene="Dicer1"
/inference="alignment:Splign:2.1.0"
exon 3195..3377
/gene="Dicer1"
/inference="alignment:Splign:2.1.0"
exon 3378..3483
/gene="Dicer1"
/inference="alignment:Splign:2.1.0"
exon 3484..3659
/gene="Dicer1"
/inference="alignment:Splign:2.1.0"
exon 3660..4440
/gene="Dicer1"
/inference="alignment:Splign:2.1.0"
exon 4441..4596
/gene="Dicer1"
/inference="alignment:Splign:2.1.0"
exon 4597..5473
/gene="Dicer1"
/inference="alignment:Splign:2.1.0"
exon 5474..5742
/gene="Dicer1"
/inference="alignment:Splign:2.1.0"
exon 5743..5905
/gene="Dicer1"
/inference="alignment:Splign:2.1.0"
exon 5906..5981
/gene="Dicer1"
/inference="alignment:Splign:2.1.0"
exon 5982..6304
/gene="Dicer1"
/inference="alignment:Splign:2.1.0"
ORIGIN
agggcgagcaaccgagggggcgcggagcggcggcgcgacgccggtgggattctccaagccgctgtgcgccgtcgccgcgggccgagcgcgggctgcgggcgagcagggcgctgcgcagtctccgcaggcgcgggcgggaggggtcgggacgcggcgcggtgcggtgcgggcggctccgggcccaggtgaatggagtaacctgacagcgggaacgaggcgacggcgagcggcaggaaatggcggcggcggcggcggcgccgggcggcaccgggaggcctgggctgtgacgcgcgcgccggagcggggtccgatggttctggaaggcccgcggcgcccagtgctgcagtaagctgtgctagaacaaaatgcaatgaaagaaacactggatgaatgaaaagccctgctttgcagcccctcagcatggcaggcctgcagctcatgacccctgcttcctcaccaatgggtcctttctttggactgccatggcaacaagaagcaattcatgataacatttatacgccaagaaaataccaggttgagctgctggaagcagctctggaccacaacaccattgtgtgcttgaacactggctcagggaagacgttcatcgccgtcctgctcaccaaagagctggcccaccagatcaggggcgacctcagtccgcatgcaaaaaggactgtgttcctcgtcaactctgcaaaccaggttgctcaacaagtgtcagctgtcagaactcactcagatctcaaggttggggagtactcaaacctcgaagtgaatgcatcttggacaaaagagagatggagccaagagtttactaagcaccaggttctcattatgacttgctatgtcgccttgaatgttttgaaaaatggttacttatcactgtcagacattaaccttttggtgtttgatgagtgtcatcttgcaattctagaccacccctatcgtgaaattatgaagctctgtgacagttgtccatcatgccctcgaattttgggactaactgcttccattttaaatgggaaatgtgacccagacgaattggaagaaaagattcagaaactggaaaagattctcaagagtggcgctgagaccgcaactgacctggtggtcctggacagatacacttctcagccttgtgagattgtggtggattgcggaccatttactgacagaagtgggctttatgaaagactgctgatggagttagaagaagcacttgactttatcaatgactgtaatgtatctgtacattcaaaggaaagagattctactttgatttccaaacaaatcctctcagactgccgtgcagtgctggtcgtcctgggaccctggtgtgcagataaagtagcggggatgatggtaagagaacttcagaagtacatcaaacatgagcaagaggagctacacaggaagttcttattgtttacagacactctgctaaggaaaatacatgcactgtgtgaagagtacttctcccctgcctcacttgacctgaagtatgtaactcccaaagtcatgaaactgctcgagatcctgcgcaaatacaagccctatgagcgacagcagttcgaaagtgttgagtggtacaataacaggaatcaggataattatgtgtcctggagtgattctgaggacgatgacgatgatgaagaaattgaagaaaaagaaaagccagagacaaattttccttctccatttaccaatattttatgtggaattatttttgtggaaagaagatacacagcagttgtcctaaacagattgataaaggaagctggcaaacaagatccagagctggcttatatcagcagcaactttataactgggcatggcattggaaagaaccagcctcgcagcaagcagatggaggcggagttcagaaagcaagaggaggtacttaggaaatttcgagcacatgagaccaacctgctcattgcaacaagtgttgtagaagagggtgtggacattcccaagtgcaatttggtggttcgttttgatttgcccacagagtatcgttcttacgttcagtctaaaggacgggcacgagcaccgatctctaattatgtaatgttagcagacacagacaaaataaagagctttgaagaagacctcaagacctacaaagctatagaaaagatcttaagaaacaagtgttcaaagtcagtggatggtgctgaggctgacgtccatgctgttgtagatgatgatgatgttttcccgccatatgtactgaggcctgatgatgggggtcctcgagtcacaatcaacactgccattggacacatcaacagatattgtgctcgattaccaagtgatccgtttacgcatctagctcccaaatgtagaacccgagaattgcctgatggtacattttattcaactctttatcttccgattaactcacctcttcgagcctccattgttggtccaccgatgggctgtgtacggctggctgagagagtggtagctctcatctgctgtgaaaaactgcacaaaattggtgaactggatgaacatttgatgccagttgggaaagagactgttaagtatgaagaagaacttgacttacatgatgaagaggagaccagcgttccagggagaccaggatccacaaaacgaaggcagtgctaccccaaagcaattccagagtgcttgagggagagttaccccaaacccgatcaaccctgttacctgtatgtgataggaatggtcttaaccaccccccttcctgatgagctcaacttcaggcggcggaagctctaccctcctgaggacaccaccagatgctttgggatcctgacagccaaacccatacctcagatccctcactttcctgtgtatactcgctctggagaggtcaccatatccatcgagctgaagaagtctggtttcacactgtctcaacaaatgcttgagctggttacgagactgcaccagtacatattctcacacattctccggctcgagaagcctgccctggagtttcaacccgcgggcgctgagtcagcgtactgtgttctacctcttaacgtcgttaatgactccagcactttggacattgactttaaattcatggaggatattgagaagtctgaagctcgtataggcattcccagcactaagtattcaaaggaaacaccgtttgtttttaagttagaagattaccaagatgcagttatcattccaagataccgcaattttgatcagcctcatcgattttatgtagctgatgtgtatactgatcttaccccactcagtaaatttccttcccctgaatatgaaacttttgcagaatattataaaacaaagtataaccttgacctgaccaatctcaaccagccactgctggatgttgaccacacatcttccagactgaaccttctaacccctcggcatttgaatcagaaggggaaagcacttcctctaagcagtgctgaaaagaggaaagccaaatgggaaagtctgcagaacaaacagatactggttccggaactctgtgctatacatccaatcccagcatcactgtggagaaaagcagtttgtctccccagcatactgtatcgccttcactgccttctgactgcggaggagctcagagctcagacagccagcgatgctggcgtaggagtcagatcacttccggccgattttagataccctaacttagacttcgggtggaaaaagtctattgatagcaagtctttcatctcaacctgtaactcctcgttggctgagagtgataattactgtaagcacagcacaactgtagtccctgaaaatgctgcacatcaaggtgctactagaccctccttagaaaaccatgaccaaatgtctgtgaactgcaaaaggttgcccgccgagtcacctgctaagctccaaagtgaggtttcagtggatcttacagcaatcaatggtctttcttacaataaaagccttgccaatggcagttatgatttagttaacagagacttttgccaaggaaatcagctgacttacttcaagcaggaaatacctgtacaaccaactacctcatatcccattcagaatttatacaattatgagaaccagcccacgcccagcaatgaatgtcctctactgagtaataagtaccttgatgggaacgctaacacatctacctcagacggaagccccgcagggtccccaaggcctgccatgatgactgctgttgaagcactggagggcaggacagactctgagcagagcccttctgtggggcactcctcaaggactctcggccccaacccaggactgattcttcaggctttgacactgtcgaacgctagcgatgggtttaacctagagcggcttgagatgcttggcgactccttcttaaagcacgctatcaccacgtatctgttttgcacataccctgatgctcatgagggccgcctttcatatatgagaagcaaaaaggtcagcaactgtaacctgtaccgccttggcaagaagcagggactgcccagccgcatggtggtgtcgatatttgatcctcctgtgaattggcttcctcctggttatgtggtaaaccaagacaaaagtaactcagagaaatgggaaaaggatgaaatgacaaaagactgcttgctggctaatggcaaactgggtgaggactgtgaggaggaggaggaggaggagctggcgtggagggctcccaaggaggaggctgagtatgaagacgacctcctggagtatgaccaggagcacattcagtttatagacagcatgctaatgggctcaggggcctttgtgaagaaaatccctctttcccccttttccacctctgattctgcatatgaatggaaaatgcccaaaaaggcctccctgggcagtgtgccgttttcctcagaccttgaggattttgattacagctcttgggatgcaatgtgctatctggatcctagcaaagccgttgaagaggatgactttgtggtaggtttctggaatccatcagaagaaaactgtggcgtggacacagggaagcagtccatttcttacgacttgcacactgagcagtgcatcgcggacaagagcatagcggactgcgtggaggccctgctgggctgttacttaaccagctgtggtgagagggctgctcagctcttcctctgctcgctggggctgaaggtgctcccagtcatcaaaaggaccagccgggacaaggcctcgtaccctgctcaggagaactcaagcagccaacagaagagcccttcagggagctgtgctgctgcagtcagtccccgctcctctgcagggaaagacttggagtatggctgcttgaagatcccgccaaggtgtatgtttgaccatccagatgcagagaaaaccctgaaccacctcatatctgggtttgaaaattttgaaaagaaaatcaactacatattcaagaataaggcttaccttctgcaggcttttacacatgcctcctaccactacaacactattactgattgttaccagcgcttagaattcctgggagatgcgattttggactacctcataaccaagcacctttatgaagacccacggcagcattctccaggggtcctgactgacctgcgctctgccctggtcaataacaccatctttgcgtcgctggctgtgaagtatgactaccacaagtactttaaagccgtctctcctgagctcttccacgtcattgatgacttcgtgcagtttcagctggagaagaacgagatgcaaggaatggactctgagcttaggagatccgaggaggatgaggagaaagaagaggatattgaagtccccaaggccatgggagacatttttgagtctcttgctggtgccatttatatggacagtgggatgtccctggaggtggtctggcaggtgtactatccgatgatgcggcctctaatagaaaagttttctgcaaatgtgcctcgttctccggtaagagaattgcttgagatggaaccagaaactgccaagtttagcccagcggagagaacttacgatgggaaggtcagagtcaccgtggaagtggtgggaaaggggaagtttaaaggtgtcggccggagctacaggatcgcaaagtctgctgcagcacgaagagccctccgcagcctcaaagctaaccagcctctggttcctaacagctgaagcttccagactcacaggcggcaaggcagtgaccagaaccatagcagcacaccacaaaggatgactcaagccgacacagagcagaaagattgacggcagaacttaaagtttgataatgagatagataacagaataaaacctttaatatgtgtataaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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