LOCUS       NM_001109366            3973 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus claudin 34A (Cldn34a), mRNA.
ACCESSION   NM_001109366 XM_001064790 XM_001068935 XM_039099990
VERSION     NM_001109366.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3973)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000021.1.
            
            On or before Aug 30, 2022 this sequence version replaced
            XM_039099990.1, NM_001109366.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            RefSeq Select criteria    :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3011              JAXUCZ010000021.1  25212812-25215822
            3012-3973           JAXUCZ010000021.1  25232113-25233074
FEATURES             Location/Qualifiers
     source          1..3973
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq13"
     gene            1..3973
                     /gene="Cldn34a"
                     /note="claudin 34A"
                     /db_xref="GeneID:503435"
                     /db_xref="RGD:1594343"
     exon            1..3011
                     /gene="Cldn34a"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    3008..3010
                     /gene="Cldn34a"
                     /note="upstream in-frame stop codon"
     exon            3012..3973
                     /gene="Cldn34a"
                     /inference="alignment:Splign:2.1.0"
     CDS             3029..3664
                     /gene="Cldn34a"
                     /codon_start=1
                     /product="claudin 34A"
                     /protein_id="NP_001102836.1"
                     /db_xref="GeneID:503435"
                     /db_xref="RGD:1594343"
                     /translation="

MILFNKGSSCQVGGFALSTIAWILCITSMGLPQWRVWYSKEPVISYPTVAFVGVWKTCIYHHDNFSNIRMCYQYSYHDTFVPLDIRVAQHLMLITCIFCLIGKAATVVALRNVYTGRQERDVTYNAFGLSAVLNIIASSFVFLAVLCNYFSIINNEGIAFPPSFHMPFYPHIQQVGIAMVVAFLAAILFLCSGVIFISFTFPLNIQVLPNI"

ORIGIN      

ttgacagaatctccctatgtagccctggttgtcctgaaatttgctgttacagaagaagtgggtctcaaattcacagaaatctgcctgcctctgcctcctaaatactggggccaaaagtatgcattacaatgcccagatgcttcctgagtcaaaatggaatggttcagttcagattaatttgtttcacaatacccccagcccccaaaagtttttcttcaatccatttacacataattttctaggtctgcctcctagctcataattgacaatacctttgcatgtctgtgctctcctatgatgtgccttgttcctctcatgcttgcagttctattttgacttgctcaacaacttgttttaattgtcctgtcagttaacaaactccagctgaacactttgagaaagagcatttcctaagtgctggcattttaactagctatagtatatcaggtacaacatgatactagtacttttagtgctacttgggtttgatacataaacacattgctccaggaagggaaagcacacttcctgtttaaattttctaatcagatttgtacttaagcctcgtggattctaaaacttcctgatagtttgattctctggtggcccctgtttccatcagtgatcacactgggatccccaaaagtcactttccaatgtgttttcttctaattagctgagaagctttttaaagtttgggtttatcttctatgaccagttcgttattccactatcaaattcatacagacaaacaaggtaaaagcttgactctttcctctaatatttttatatctaaagttaagagaaatatcaaactggctttcatgtcatgaaggtatattttactttatttttgtttgacttttgctttttcctttgtttatattgaatcatataaggaagtgaatcacttccttatatgacctcatgagatatttctagatttcttttttttttgccaagctgtgactgtttattaattgaccagattataaaaatacaatgggcaataccttagttcattcatctagtaagcctgtttatctggtcttccctgttgccagcatctccaccttctacaaagtgagttgtctttttcttcattccacctcatggggaagatagtttgaaggaccattaataataaaaacctcccttccaaggtagattgcttcaactgacaagactcagtgatatatagaaggtgaatagtagaaacccttatgttctgcattgcaatagtatctagccattacaagacctacagaggtccaagctagatggggtctcagtgttgagagggggaagaagttcttatccctaaccatgaagctattatcaattgatgtgtacttgcaaatgaaaaatttattttttcaatagagtggactagttgcctcaagtgccaagcacctgaaattcctgaccaggtagttgttgttgttgttgttgatggtgatgatgattattaatattattggtttgtgttctctctctctctctctctctctctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcatacgcacgcaatataagatatagggtgctgttggacctgccttggatagtatgattgcttgctaaggtaaagcagggagccatcagtgttcttgaggggtttgaacacatggagtttgcctataaatgaggtctgtggcgagattcctagaaaactgcagatatgtatctgggaaaggagaaaggtctgaagcagttgttaattgtgctggaattcttgcttccctgatagcaatggcttcaactagattcttgggttagggatggctctccattctcatgttcctataataatagttcctgtcttcctatcatgcctcaatagcaacatggagggcaccatgaggaaagatagaccaagcatgcttactcagatctctctgggtatagccatgagtgtgcagatcactggatttttaaaagaagaaaacataatctgacaacttgtttggcacctatgtggggctttgaagaaattttgaagcaagtcattttaacagaagcttagataagcagttatttttatggaaggggttccatacaaacaggcagttttaacataaactaagataactagggcactctgatctttggttttttgagtagagctgggtagttttccatggtattcttcatcaagaagatgaaattccagttaaagttgaaatggcctcttccagaatacaagatggagggacatctgctctgtctcacctcaacacattagctctcaattacttctccagcacaatgtcttcctgcatggtaccatgctttcctccatgatgataatggactaaatctccagaactgtaagcaagtcccaattaaatatttagagttgccttgttcatggtgtctcttcacagcaataaaacactgactaggataggattcaaaacctctttctgatatcagcaggcaccaggcattcataaggcacataagatgtaggcaaaacttttacacagatgaagtaaagacaaataacacttaaaacttttaaaaagtaattttaatcctgaggcaactcaggtagactgtgtacaggaattctttgggacaatcagaaatagtgcatttgtttagattacaatctggaatgattatgcatttcatgtggatcaaaaatgtgggtaaaaggaataaagaggcaaggctggtcctcaaaggtaagtggctctatatctgggagcacaagagaaaactctagcctatgtgttaatttcctagagagataccatctcaagttactagaaaatactagaaaggtgacaacatcctgtcaatgtgtggtagtttaactttgtgtttctgttggactgctcagcagtgtttcttattacacgtgactacccaggatatgagccctgcgctctgctgattggcatgatccctaggatggatgaggaatggaccaactgtacaacacatgagcagtcttttgctaagttgtgttcactgtcatcatgatattgttcaacaaaggttccagttgccaggtaggaggttttgctttgtccaccatagcatggattctttgcatcacttccatgggcctcccacagtggcgagtgtggtactcgaaggaacctgtgatctcttaccctactgtggcctttgtgggagtgtggaaaacctgcatctaccaccatgacaacttcagcaatattagaatgtgttaccaatacagctaccatgacaccttcgttcctttggatattcgtgttgctcagcacctgatgttgatcacctgcattttctgcctgattggaaaagcagccactgttgttgctcttagaaatgtgtacacaggaagacaagagcgggatgtcacctacaatgcctttggcctttcagcggttctgaacatcattgccagtagctttgtcttccttgctgtcttgtgcaattatttctccatcataaacaatgaagggattgcttttccaccatctttccatatgcctttttacccacatattcagcaggttggcattgccatggtagtggcatttctagcagccatcctgtttttgtgcagtggtgtgattttcatttctttcacatttcccttaaacatacaagttcttcctaatatctgaaactgaatgtacttcaccttgaaaaacaatccaaaacttcatgttgctacagcaaggatttttgagatgactaaaatttccaaggactcagcaatgtccaaatggcctgtgacagaaaatggccaaatgcctctttattatcttttctgtctcatttgttttattacttcattggtcggattatggactttcattaaaatgaacttacctacttgtcaagtgatcttatgaaattacagttttaattgatggcactgaaggaaaaatgattaataaacctagaatatatgaaaatgaatgtcagagcac

//