LOCUS       NM_001109316            2564 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus retinoic acid induced 2 (Rai2), mRNA.
ACCESSION   NM_001109316 XM_001072471 XM_576959
VERSION     NM_001109316.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2564)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474014.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_576959.2, XM_001072471.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CB692859.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132267
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2564
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq14"
     gene            1..2564
                     /gene="Rai2"
                     /gene_synonym="RGD1560139"
                     /note="retinoic acid induced 2"
                     /db_xref="GeneID:501555"
                     /db_xref="RGD:1560139"
     exon            1..192
                     /gene="Rai2"
                     /gene_synonym="RGD1560139"
                     /inference="alignment:Splign:2.1.0"
     exon            193..2564
                     /gene="Rai2"
                     /gene_synonym="RGD1560139"
                     /inference="alignment:Splign:2.1.0"
     CDS             217..1806
                     /gene="Rai2"
                     /gene_synonym="RGD1560139"
                     /codon_start=1
                     /product="retinoic acid-induced protein 2"
                     /protein_id="NP_001102786.1"
                     /db_xref="GeneID:501555"
                     /db_xref="RGD:1560139"
                     /translation="

MDDLQSQNLSMDMTDSPPTLANNRLENGMAQLITTEAWNINSTDLVKKALVTVPAPSILNPPAESQSGMALKVAATVLQPLCLGESPVVMPIHMQVEGSSAPELNPNGNATYVMTTQGPVQLPVVLEQHVFQHLNSPLVLPQEAPCSSNAIHNNLFQGAEDSEAQPQLLDLRIPSQPQEPTLPFEAVLQNLFPTQGSLGPPPCQPPPGYAPVPPQPFSSPLSPLVPPATLLVPYPVIVPLPVPVPIPIPVPVPQSSESKFSPSFPKPPSSFGLHSFKGTQTTLEKDELKPLDILQPKEYFQLSRHTVIKMGGENEALDLSMKSVPWLKAGEASPPVFQEDAALDLSLAAHRKAEVPPETLYNTSGSADIQGHTLLEKRPSGMEMPFAPAKSREASAMMDSHSSSSNGTEMVSQPIHPGSELKPENNIEIVSESQAAKVIVSVEDAVPAIFCGKIKGLSGVSTKNFSFKREDSVLQGYDINSQEDESLGNTEPLRKPIKNRSIKLKKVNSQEIHMLPIKKQRLATFFPRK"

ORIGIN      

cggacacaggcacacacgcgcacagacacagtcggcagtggcggccagcgacagcggctgggtgacagcaaagacagaggctcccatcgctgtgcacccccttcaggcgcccagcggcgaggccagaccaagagagttcccacaccaacgtccaccccgtggcttcctggaggcggcagcccggatcccgaggccacgtggcaccggagccaagtgatggatgacctgcagtcccagaacctttcaatggacatgactgattcccctcccactttggctaataacagactggagaacggcatggcccagctgataactaccgaggcctggaacatcaactccactgacctggtaaagaaggccctggtgaccgtgcctgccccatcaattctgaaccccccagctgagtcacagagtggcatggctctgaaggtagcagccaccgtgctgcagcccctgtgccttggggaaagcccagtggtgatgcccattcacatgcaggtggagggaagctctgcgccagaactcaaccccaacggcaatgctacctacgttatgacgacacaaggccccgtgcagttaccggtggtgttggaacagcatgttttccagcatctcaactcccctctagtcctgcctcaggaggccccgtgctcctccaatgctatccacaacaatctcttccagggggctgaggactctgaggcccaacctcagctcctggacctgaggattccaagtcaaccacaggagcctacgttgccttttgaagctgtgctccagaatttattccccacccaaggctctttgggccctccaccctgccagcctcctcctggctatgctccagtgcctccccagccctttagctcccccttgtctcccctagtcccaccagctaccctcttggtgccctatcccgtgattgtccccttgccagttccagtgcccattcccatccctgtcccagtgcctcagagttctgaatctaagttcagccccagtttccccaagccaccatcttccttcggcctgcactcctttaaaggtactcagaccactctggaaaaggatgaactgaagcccttagacatcctccagccaaaggagtatttccagctcagccgccacacagttatcaagatggggggtgagaatgaggccctggatctgtccatgaagtcagtgccctggctcaaggctggggaagcaagccccccagtctttcaagaggacgcggccctggatctgtctttggcagcccaccgaaaagctgaggttcctccagagacattgtataacaccagtgggtcagcagatattcagggtcacaccctgctggagaaacgtcccagtggcatggaaatgccctttgccccggccaagtctcgtgaggcctcagccatgatggatagtcacagcagcagcagcaatggcaccgagatggtcagccagcccatccaccctggcagtgagttaaagcctgaaaataacattgagatcgtaagtgagtctcaggcagccaaggtcattgtgtcagttgaagacgctgtgcctgccatcttctgtggcaagattaaaggcctctcaggggtatccaccaaaaacttctccttcaaaagagaagactctgtgcttcagggttatgacatcaacagccaagaagacgagtccctgggaaacaccgagcctcttaggaaacccatcaaaaatcggagcataaagttaaagaaagtgaactcccaggaaatacacatgctcccaattaaaaaacaacggctggccacctttttcccaagaaagtaaataagggctttaaaacatttttatgattatgatgtggggaaaggtgcattgtttttttttaaaggcatctaaaacaaattatctttgttaattattttggggcataggtgggagcagaaaggcaaattagctagtatcattttcttttttaatttttgacttttcacaaatgagtaaataagagcaacctatttttcaagcagattgcacatttttttgcagctttaatggaatattgggtgaatcagaggggtgagagctattttcattgccacaaagtgctttgatgatgtaatacctaataaagggtaggatgactatttcacaataaatgtttgtttgcactaattggttgcagtattctgtcatttgtaaaatttacatttctcaactggcgtggttggcctacacttttgcttgtaaagagctctaatttattactatttagagacctaagctcttcaggcatgttgggaaatactgccttgcgcctcagaggaggaggattcagggtatgtatggtctctaacaaatcacttttccctctgggccttggttgggttgctgctgctgctgctgctgctgctgctgctgctgctgctgctgctgctgctgctgctgctgctgcttttatctcaatgtggcaaaggcccagggagggggcagaaatgtgagtctcaagtactcaaggcctctctcaggtcactcagttcttgactgtgtttagtttttttttttttcttggacttctccatgct

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