LOCUS       XM_066308815             888 bp    mRNA    linear   PLN 10-JUL-2024
DEFINITION  PREDICTED: Oryza sativa Japonica Group putative homeobox protein
            knotted-1-like 5 (LOC136355793), mRNA.
ACCESSION   XM_066308815
VERSION     XM_066308815.1
DBLINK      BioProject: PRJNA1123306
KEYWORDS    RefSeq.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_089037) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_034140825.1-RS_2024_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/21/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..888
                     /organism="Oryza sativa Japonica Group"
                     /mol_type="mRNA"
                     /db_xref="taxon:39947"
                     /chromosome="3"
     gene            1..888
                     /gene="LOC136355793"
                     /note="putative homeobox protein knotted-1-like 5; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 11 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:136355793"
     CDS             248..631
                     /gene="LOC136355793"
                     /codon_start=1
                     /product="putative homeobox protein knotted-1-like 5"
                     /protein_id="XP_066164912.1"
                     /db_xref="GeneID:136355793"
                     /translation="

MNKYSGYLNSLWTEISNKKKNSTGHLPRDARHKLLQWWHLHYRWPYPSEAEKAALAESTGLDKKQVTNWFINQRKRHWKPKPAAAMDAGFLQMHPRYGASSSSSPAAALRVEDGGGRRSAYHPRGGP"

     misc_feature    359..475
                     /gene="LOC136355793"
                     /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920"
                     /db_xref="CDD:428673"
ORIGIN      

caatagtatatgtactcaatcatcattaatattccttcataataacacacagtgcagctagaggatatatatacttatccaaaatatcattgatctgtcgtgatgaagcgtatgtatatatatatatatctcatctgcagacgaagacgttagctacgactacgaggacgaggtcgccggcggcttgccggagaagagcgccgcatttggagagaatgaggtgacgacgacgacgaggaggcacctcatgaacaagtacagcggctacctgaacagcctatggacggagatctccaacaagaagaagaacagcacggggcatcttccccgtgacgctcgccacaagctcctccaatggtggcaccttcactacagatggccgtacccatcggaggcggagaaggcggcgctggcggagtcgacggggctggacaagaagcaggtcaccaactggttcatcaaccagcggaagcgccactggaagcccaagccggcggcggccatggacgccgggttcttgcaaatgcacccgcggtacggcgcttcttccagcagctctcccgccgccgcgctccgggtggaagacggaggaggacgacgaagtgcgtatcatccgcgtggtggaccgtgatgcgagaacacgtatatatggcgcacgtacgtacgtacgtcgtgtgatccacgtatagtacgacgcgggcgcggcgccatcgccatgttttgcgcgcgagcgcggtgcgcgcggcggccgcggatcagatgcatattctcctaaataatttgcttgactaatgctagtaataatgttagtgtctatctacaaagctgtactaattaacactaggggaaaactccaccggtggagaaatgctttttaagtcccggttc

//