2024-11-23 11:55:23, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS XM_066306641 1032 bp mRNA linear PLN 10-JUL-2024 DEFINITION PREDICTED: Oryza sativa Japonica Group uncharacterized protein (LOC136351087), mRNA. ACCESSION XM_066306641 VERSION XM_066306641.1 DBLINK BioProject: PRJNA1123306 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_089046) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_034140825.1-RS_2024_06 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 06/21/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1032 /organism="Oryza sativa Japonica Group" /mol_type="mRNA" /db_xref="taxon:39947" /chromosome="12" gene 1..1032 /gene="LOC136351087" /note="uncharacterized LOC136351087; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 1 Protein, and 86% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns" /db_xref="GeneID:136351087" CDS 365..847 /gene="LOC136351087" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_066162738.1" /db_xref="GeneID:136351087" /translation="
MSLEPASPSADSGVTSLTSTANNVAVVVRGGDSDDSDDSDSSDGVGYDSDDLMDDMMDDIFEQFIEKDELLDRIGARLVAPLLPAATRAQRRQVLEQREQARAAREELRRGVARSRELTRKIRRLKRMANADVSGYPAARREAHERETRRLAREIFGSDA"
ORIGIN
atggtgtttctattgaaattgaaaaagaaaatattagggtaaaatttttgtcgagcccaaactaagggtctgttcagattatagctaaaataaaccttatcaaattttagtaatatcatgtatttatcaagatttaacaacaaattaaatatagatatttttttggtaactttattaaaaaaaatgtatagttgagaattgcataaatctcaacggcccctaaccctagaattccacgccgtcgattcgagtattcgttcttcaagttttttttgccttcccggcgcctccacccaaacccccattctatccctccccaaaaccaccaagaaaatccttgtgatctcgcctccaagatcgatccatgtcgctggaaccggcctcaccttccgccgattccggtgtcaccagcctcacctccaccgccaacaatgtcgccgtcgtcgtccgcggcggcgacagcgatgacagcgatgacagcgacagcagcgacggcgtcggctacgacagcgacgacctgatggacgacatgatggacgacatcttcgagcagttcatcgagaaggacgagctgctggaccggatcggggcccgcctcgtggcgccgctgctccccgccgccacccgggcgcagcggcggcaggtcctggagcagagggagcaggcgcgcgcggcgcgggaggagctcaggcgcggcgtggcgaggagcagggagctgacgaggaagatcaggaggctcaagaggatggcgaacgccgacgtctccggctaccccgccgcgcggcgggaggcgcacgagagggagacgcggcggctcgcccgggagatcttcggctcggatgcctagcctggcaatcacatctattcttactgccaactcaattcttgacaacagaaccaagagggtattgttggcaccaattttgcccatgatttaaacatgattttaatatgttgtatattaatatttagcttgtaatatactgtatagagatgaccgaatggatgaataaaatcattaactaaataaat
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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