LOCUS       XM_066304067            2181 bp    mRNA    linear   PLN 10-JUL-2024
DEFINITION  PREDICTED: Oryza sativa Japonica Group homeobox-leucine zipper
            protein HOX10-like (LOC4347608), transcript variant X2, mRNA.
ACCESSION   XM_066304067
VERSION     XM_066304067.1
DBLINK      BioProject: PRJNA1123306
KEYWORDS    RefSeq.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_089043) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_034140825.1-RS_2024_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/21/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2181
                     /organism="Oryza sativa Japonica Group"
                     /mol_type="mRNA"
                     /db_xref="taxon:39947"
                     /chromosome="9"
     gene            1..2181
                     /gene="LOC4347608"
                     /note="homeobox-leucine zipper protein HOX10-like; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 45 long SRA reads, 8 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 27 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:4347608"
     CDS             1336..1896
                     /gene="LOC4347608"
                     /codon_start=1
                     /product="homeobox-leucine zipper protein ATHB-15 isoform
                     X1"
                     /protein_id="XP_066160164.1"
                     /db_xref="GeneID:4347608"
                     /translation="

MDWPAGVNDQICSSNDQWCIANVQEGSSIGMKPPLCLDMDRMSGLRERDVSRIGTLLDSIGRCSSLAPRMAFREWPLSWNLGLSSWQKQRQDNQQQQQRKQPAHAPMALRRKRLRLRRRRETMRRSDGMEMEMVNLKLYLENRCILEENERLREKASALHRENLALRADLRNTSSPATTAAAASSC"

     polyA_site      2181
                     /gene="LOC4347608"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

ttttttcaaatttatcctttcaacgcagcctcaagcgattttgaaatggaaggagtaattaaatttatcttgttttaaaaaaaatcaagtacacctacggtatggtcgtatggatacagatgtacacgtgtacggtgtacagctgctccgtacaaaatcctcgagtctcacttatttgtgttgtgtgtgatgttgtgtgagaacgccaagctccccatcccaccaatggcgcatctccgcctcatcgccgcggtcgcctgcgccaccgccgccgccgcggccccgacgagtagccgcggcctccccgccagtgctcgccgcgctggccgccgcccagccggcgaacgcgctctcgctgcccacctgggccgtccacgtctccagcgtcgccgagtgggtgacggccatgacgctggtttggagctacgggtagaggacggggctcaagggttggaaagacctctcttgaggaatggttccacttcttggtggagcgatgtgcgcttgcacgtggcatttcttctataattcggagtctcttgaggtgcttgtagcgctccaaggtgttctaacagtgattggtaacattacaatgtgcatagctgcatttcgcatcttcaaagcatcccaggaaagctcaaaaagttcatagagggacctgtagcatgcatacactaatgtactagtaacttattgtggtaaaatataccatacttctgaaaacggattacttagagttgcaacatctatctattaggtggaagcttcttgagaatggcaggtacacctgacatgaaatggcaaacggtagatgctatgaaggcagaagataaaagctgctgacggcttgcagctacttcagaaagatgattttttatcagaccgaaagagccattttttttgtatgtatcaattctacaaatgccagctaaaaccaccctgaaatttgtgtattgactcagatttttttctagacaatgagtgtatttactcagataagaagaaaatttacctcacctgctatagcctatgcctcatctcatcttcaactgttttgaacaattgttgtgcaagcttcttctgctcatgatcatttaaccaaacctgctccaaaaggtgccaaagcacctgtccttcacctcgagatgctcttggcatgtggcttcataatgctaaccctgaaccaatatcacacactcactgctattgctggatgaggtatgtgtgttcgtgtgtgtgttcatgaatcatgataacctctagctactatcgtatgtgattcacatgctcattggcaacacttgcagtggtgatggtgagccaggttcatgaatcatggactggccagccggtgtcaatgaccaaatttgcagcagcaatgaccaatggtgcattgccaatgtgcaggaaggttcaagcatcggaatgaaacctccactctgcctagatatggatcgcatgagtggactcagggagcgagacgtgtcgcgcatcgggaccctcctggacagcatcggacggtgcagctcgctagctccaagaatggctttcagagaatggcctctctcatggaatcttggcctctcaagttggcagaaacagcggcaggacaatcaacagcagcagcagagaaagcagccggctcatgcccccatggctctcaggaggaagaggctaaggctgaggaggaggagagagaccatgaggagatctgatggaatggagatggagatggtgaacctgaagctctacctggagaacaggtgcatcctggaggagaacgagaggctgagggagaaggccagcgcgctccaccgggagaacctcgcgctgcgcgccgacctgcgcaacacatcgtcgccggcgacgacggcggccgccgcctccagctgctgaactgagcactcgccgcctccttgctagctactacagcttgtgcggtgtttttgtgctggtttgcctataaaaccgtagctttcttggtctcttggtgatcatggttggctggctggttctagctatatattagctaccggtgctatcagctttggtttcttcgtgtcaggccagttatgatcagccagacagccactaggtttttggagctcttctgtgtgttcttgtggcataatgcttgtacattggaagtttgtgagagttaactagattttgtttggctaa

//