LOCUS       XM_026020765            2984 bp    mRNA    linear   PLN 10-JUL-2024
DEFINITION  PREDICTED: Oryza sativa Japonica Group uncharacterized protein
            (LOC4324432), mRNA.
ACCESSION   XM_026020765
VERSION     XM_026020765.2
DBLINK      BioProject: PRJNA1123306
KEYWORDS    RefSeq.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_089035) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jul 10, 2024 this sequence version replaced XM_026020765.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_034140825.1-RS_2024_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/21/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2984
                     /organism="Oryza sativa Japonica Group"
                     /mol_type="mRNA"
                     /db_xref="taxon:39947"
                     /chromosome="1"
     gene            1..2984
                     /gene="LOC4324432"
                     /note="uncharacterized LOC4324432; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 5 ESTs, 315 long SRA reads, 6 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 137 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:4324432"
     misc_feature    1
                     /gene="LOC4324432"
                     /experiment="COORDINATES: cap analysis [ECO:0007248]"
                     /note="transcription start site"
     CDS             38..508
                     /gene="LOC4324432"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_025876550.1"
                     /db_xref="GeneID:4324432"
                     /translation="

MRRDAAAVPTAAVASPPISVEAVVIDVEGDPAVPAGAACRICHLVPEGGVGPGSEVIRIGCGCKDELGAAHRHCAEAWFRIKGDRRCEICGSDAKNIIGLEVKKFMEEWHGPRLANTRTTTQRESTCWRTQPFCNFLLACLLIAFMLPWFLRVNMF"

     misc_feature    146..>505
                     /gene="LOC4324432"
                     /note="E3 ubiquitin-protein ligase DOA10
                     [Posttranslational modification, protein turnover,
                     chaperones]; Region: SSM4; COG5183"
                     /db_xref="CDD:227510"
     misc_feature    152..310
                     /gene="LOC4324432"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; Region: RING_Ubox; cl17238"
                     /db_xref="CDD:473075"
     misc_feature    order(152..154,161..163,224..226,239..241,248..250,
                     257..259,296..298,305..307)
                     /gene="LOC4324432"
                     /note="cross-brace motif; other site"
                     /db_xref="CDD:438111"
     polyA_site      2984
                     /gene="LOC4324432"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

gagaccgaccgggccccgatcgttcgacccggagcatatgcggcgagacgcggccgccgttccgacggcggccgtcgcctcgccgccgatctcggtggaggcggtggtcatcgacgtcgagggggatccggcggtccccgccggcgctgcgtgccggatctgccacctcgtcccggagggcggcgtcgggcccgggtcggaggtgatccggatcgggtgcggctgcaaggacgagctcggcgccgcgcaccgccactgcgccgaggcctggttcaggatcaagggcgataggcgctgtgagatttgtggttcagatgccaaaaacattattgggctggaagtgaaaaaattcatggaagaatggcatggtccaagactggcaaacacacgaactacaacgcagagggaaagtacttgttggagaacgcagcctttttgtaatttcttgctagcatgcttgctgattgcttttatgcttccctggtttctccgtgtaaatatgttctgacttttatgccattattgggtcatgtagaatttcaacttgttttcttggctaccatcaaaaggatgagttgtgtagaaatgtataggcagagtcacaacatagatccttaaacatatacttcaaatctcccttcggatctctcatgctcccctttttacttgaaatctttaatcacctttgtatagtgttgttcatttgacttatcattcttagtttgatcaggtaaccatgtaatcccctgtactcaatatggcaggactgacccttagccatttaagtgattgcagcacaaaagcaaaatattggaatttcatgtaatgttgcttcgaattgcatataggtaatttaaaaagtgggaacagcccaatagaagcaagaaattaatcaattataagttaagaccactttggctgagacaattgagagcaggaacttgcataatcaataagtgctggagtgattactggcatacatgaataattctggaaatataggactttttgaccaatttaaaagtatggaacctactaatttatttcagatcatggggctctgtttttttagattcagaaagtttcagctgggctgtttcatacttcagcttctttgtcgattaattacggttttttctttgtgcatgagcatgtaggttgcatccaaaatttcaaatagatgtatggatttggggaaatttgcaggtagcttcacaagcaatctaggcatcaggaatgacctctacttccgtaataaatcattgcaagtagtaattcaatgcttgtccaaaagaggcagctttttgttcgttgtgttgatgtcataattattaacaagatattgtcattgaagatgacatgttctggatttatgctttgctttgcttcaatggattggtttctttattctatctccattgctgacattagcaacaagattattcatgttgtgaaggtgaggcaatgttaatgttatgatccgaaccacttgccaaaaagttgggactctggtaaatattttatgaaaacaatatataacttcttttttatcttgcgtaagcttgttgactgtgtttaaccccttttctggatcaggcttttattcttatggttttagttgaactatgaaatgatatttacccggtgaactatgaaattgcaggtttccgccctgtttcttgtctctacatacaccaggtacatgcttttaccctcaataccgcctgattattcgtcttatgtcatgagttcgttacgatgttgaactagcaatttatgttaaataaagaagaaaaaaatggctaaataccaatcataattaattaggatacacaaagtattgttaaatccattcaagagaagagataaaaccttgtaaaatatgcatcgtttacatatgtaaccctatataactgatgtattttgtacgtagtgaacaatgagtagcaaagactcaaacatttacttggacagttggtgccaattgtttgtaccttgcatttgcaatctgagatatgatttcctagaattcaattgtatattgtttaacattttttaaaaaagaaatgaaactgaataagttatgcaactttttaaagtacaaacataagagattttgataacttgaaactaatgattcctctaactaagattccacaacatagaataagaaccatatactagtagggcctgcccagagaagtgccctgtgctctgacctactgaatcatgtgcctaatatatatattttttctcgatgtcccatatgatgtatgttttgcctctcctttttttttatttattttacagtttttgcagtgttgagctgagtcctggtcctaactggaattaactcaattaagcatttcatttacatcagtactactaatacagatttgctttttcaaaagaacagcgtatatctctattggttcgacttcaacggataagaatttcgttgattcgtattctgtggagatcactttaatcctggaagctcgatttccatatccaatggtggttggatggtatgagagcaatcaactaccatttgtttttgtagtacagtttcatgtcgccgtaacacctgcaatcagagaaaagcaagatagactgtacaactgatcagctactctgcctactcagctggccacaaaatgatggatgttttgcgttgctcttattgacgcgtgtagtttccgaaattttctggttagtgtagtctagctggcatgctctacctattacgccatgcttgttaattttttttttagaaaatgagataaacccagcctttgcatccaatcggcccaaacgccatgcttgttaatggtcttggaaagagtttttcgttgtgtcagtagtctgtacgaggaaatattgtaggcatctcatgttttacattctctactcgtacatcaaatgctttactacatgtcatactgattgtaatttttcatttaattgaggtcttgtgttcaact

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