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2024-07-03 19:21:13, GGRNA.v2 : RefSeq release 224 (May, 2024)

LOCUS       NM_001402183            4778 bp    mRNA    linear   PLN 17-FEB-2024
DEFINITION  Oryza sativa Japonica Group endoribonuclease Dicer homolog 2a-like
            (LOC4333337), transcript variant 2, mRNA.
ACCESSION   NM_001402183 XM_015774816
VERSION     NM_001402183.1
KEYWORDS    RefSeq.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 4778)
  AUTHORS   Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I.,
            Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C.J.,
            Ohtsuki,K., Shishiki,T., Otomo,Y., Murakami,K., Iida,Y., Sugano,S.,
            Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T.,
            Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A.,
            Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J.,
            Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R.,
            Ueda,M., Matsubara,K., Kawai,J., Carninci,P., Adachi,J., Aizawa,K.,
            Arakawa,T., Fukuda,S., Hara,A., Hashizume,W., Hayatsu,N.,
            Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H.,
            Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M., Hayashizaki,Y.
            and Yasunishi,A.
  CONSRTM   Rice Full-Length cDNA Consortium; National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team;
            Foundation of Advancement of International Science Genome
            Sequencing & Analysis Group; RIKEN
  TITLE     Collection, mapping, and annotation of over 28,000 cDNA clones from
            japonica rice
  JOURNAL   Science 301 (5631), 376-379 (2003)
   PUBMED   12869764
  REMARK    Erratum:[Science. 2003 Sep;301(5641):1849]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK066278.1, AP014959.1 and AK066794.1.
            
            On Mar 8, 2022 this sequence version replaced XM_015774816.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK072334.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00008650,
                                           SAMD00020310 [ECO:0006172]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1663              AK066278.1         5-1667
            1664-1666           AP014959.1         21510026-21510028   c
            1667-3263           AK066278.1         1671-3267
            3264-4778           AK066794.1         513-2027
FEATURES             Location/Qualifiers
     source          1..4778
                     /organism="Oryza sativa Japonica Group"
                     /mol_type="mRNA"
                     /db_xref="taxon:39947"
                     /chromosome="3"
                     /map="3"
     gene            1..4778
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /note="endoribonuclease Dicer homolog 2a-like"
                     /db_xref="GeneID:4333337"
     exon            1..277
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /inference="alignment:Splign:2.1.0"
     CDS             171..4403
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /EC_number="3.1.26.-"
                     /note="Dicer-like protein 2a; LOC_Os03g38740"
                     /codon_start=1
                     /product="endoribonuclease Dicer homolog 2a"
                     /protein_id="NP_001389112.1"
                     /db_xref="GeneID:4333337"
                     /translation="
MGGPLTAAGGRGDGGAKAVEPLRPPPPPDPKTMARWYQLEALERAVRGNTLAFLETGSGKTLIAVMLLRAYAHRVRRPDSRRFAVFLVPTVVLVGQQARVVEQHTDLVVKQFCGEMGVDFWDAATWRSQLEDGEVLVMTPQILLDNLRHSFFRLQDIALLIFDECHHARGNTPYACIFKEFYHPQLNSSASDPLPRIFGMSASLIYSKDLNPHNYSKQISEIENLMNSKVYTVDSESALSEYIPFASTKIVDFDDSNISSELHANILSCLNRLNKKHIEALDRKLHGSSLENAKQRISKLHHTFVYCLYNLGVWLAAKAAEVQSYEENSLSFWGETLDKNVEGFIRNYSEEVHRELSCFLKNGHIGEKFPADSQDGILTPKVHCLIRTLLQYRHMQDLRCIVFVERVITSIVLEHLLSSIHQMSGWNVKHMAGSRPGLLSQSRKNHTEIVESFRKGKVHIIIATQILEEGLDVPSCNLVIRFDPSATVCSFIQSRGRARMENSDYLLLVGRGDVEAQTNAEKFLASGQIMREESLRLGSISCQPLENTLCEDTYYRVESTRAIVTLNSSVPLIHFFCSKLPSDEYFNPLPRFDIDKASGTCTLHLPKSSPVQTVNVEGEGSILKETVCLKACQELHAIGALTDSLLPELDVPCDEEPDIVVENKIEQPSYFPEEFVDNWRSFSRLGIYYCYKISLEGCPKTASPTDILLALKCDLGSDFTSSSFKLPGGQDNASVTMKYVGIIHLNQEQVIIARRFQTTILSFLIGDDHLEVSNGIKYFHEMQVPIGVVYLLLPLVSGRIDWCSMKFSSSPIYEANNKHMTHCHSCKDIDLLQTKDGPFCRCILKNSIVCTPHNNIFYVISGFLDLDANSCLPQHDGTVVTYKDYFKTRHGLTLTFENQPLLAGSKHVKVRNFLHNCYSKKEKEPGDRYSVELPPELCRIIMSPVSANNLHIFSYVPSIMFRIQCMLLSVKLKVQLGPTVQQFDVPVLKILEALTTKKCQEEFSQESLETLGDSFLKYVTTRHLFSEYRLQHEGILTKMKKNLISNAALCQLACSSNLVGYIHAEEFNPRDWIIPCLDYDERDNKKISFLAPNGMYSQRKMSIKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGMNIEFHTEIPVERKISMKAEEFINVRSLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYYSKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMSYYLEEFGQSFTGPSYGWEAGIGLPKVLGDVIESIAGAIYLDSKCDKEVVWRSMKRLLEPLATPETIEPDPVKGLQEFCDRRSFKITYEKNHVDGVSSVIARVKAGETTYSATKSGPCKLVAKKLASKAVLKDLIAGHKDTEAAAV"
     misc_feature    171..260
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /note="propagated from UniProtKB/Swiss-Prot (Q10HL3.1);
                     Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite"
     misc_feature    270..875
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /note="DEXH-box helicase domain of endoribonuclease Dicer;
                     Region: DEXHc_dicer; cd18034"
                     /db_xref="CDD:350792"
     misc_feature    order(270..275,282..284,333..356,471..473,660..662,
                     774..776)
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350792"
     misc_feature    order(435..440,507..512,585..587,591..596,603..605,
                     678..686)
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:350792"
     misc_feature    657..668
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /note="propagated from UniProtKB/Swiss-Prot (Q10HL3.1);
                     Region: DECH box. /evidence=ECO:0000250"
     misc_feature    1299..1697
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /note="Members of the P-loop NTPase domain superfamily are
                     characterized by a conserved nucleotide phosphate-binding
                     motif, also referred to as the Walker A motif
                     (GxxxxGK[S/T], where x is any residue), and the Walker B
                     motif (hhhh[D/E], where h is a...; Region: P-loop
                     containing Nucleoside Triphosphate Hydrolases; cl38936"
                     /db_xref="CDD:476819"
     misc_feature    1659..1661
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350171"
     misc_feature    1875..2111
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /note="Dicer dimerization domain; Region: Dicer_dimer;
                     pfam03368"
                     /db_xref="CDD:460900"
     misc_feature    2613..3002
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /note="PAZ domain, CAF_like subfamily. CAF (for carpel
                     factory) is a plant homolog of Dicer. CAF has been
                     implicated in flower morphogenesis and in early
                     Arabidopsis development and might function through
                     posttranscriptional regulation of specific mRNA...;
                     Region: PAZ_CAF_like; cd02844"
                     /db_xref="CDD:239210"
     misc_feature    order(2742..2744,2814..2816,2826..2828,2880..2882,
                     2961..2963,2967..2969)
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]; other site"
                     /db_xref="CDD:239210"
     misc_feature    3138..3602
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /note="Ribonuclease III C terminal domain. This group
                     consists of eukaryotic, bacterial and archeal ribonuclease
                     III (RNAse III) proteins. RNAse III is a double stranded
                     RNA-specific endonuclease. Prokaryotic RNAse III is
                     important in post-transcriptional...; Region: RIBOc;
                     cd00593"
                     /db_xref="CDD:238333"
     misc_feature    order(3186..3191,3198..3203,3210..3212,3219..3224,
                     3231..3236,3240..3248,3276..3278,3528..3530,3555..3557)
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238333"
     misc_feature    order(3186..3188,3195..3197,3207..3209,3498..3500,
                     3507..3509)
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /note="active site"
                     /db_xref="CDD:238333"
     misc_feature    order(3195..3197,3498..3500,3507..3509)
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /note="metal binding site [ion binding]; metal-binding
                     site"
                     /db_xref="CDD:238333"
     misc_feature    3699..4160
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /note="Ribonuclease III C terminal domain. This group
                     consists of eukaryotic, bacterial and archeal ribonuclease
                     III (RNAse III) proteins. RNAse III is a double stranded
                     RNA-specific endonuclease. Prokaryotic RNAse III is
                     important in post-transcriptional...; Region: RIBOc;
                     cd00593"
                     /db_xref="CDD:238333"
     misc_feature    order(3759..3764,3771..3776,3783..3785,3792..3797,
                     3804..3809,3813..3821,3849..3851,4080..4082,4113..4115)
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /note="dimerization interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:238333"
     misc_feature    order(3759..3761,3768..3770,3780..3782,4050..4052,
                     4059..4061)
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /note="active site"
                     /db_xref="CDD:238333"
     misc_feature    order(3768..3770,4050..4052,4059..4061)
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /note="metal binding site [ion binding]; metal-binding
                     site"
                     /db_xref="CDD:238333"
     misc_feature    4038..4040
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /note="Important for activity. /evidence=ECO:0000250;
                     propagated from UniProtKB/Swiss-Prot (Q10HL3.1); other
                     site"
     misc_feature    4173..4373
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /note="double-stranded RNA binding motif (DSRM)
                     superfamily; Region: DSRM_SF; cl00054"
                     /db_xref="CDD:444671"
     misc_feature    order(4188..4193,4197..4199,4257..4259,4314..4322,
                     4329..4331)
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /note="RNA binding site [nucleotide binding]; other site"
                     /db_xref="CDD:380679"
     exon            278..707
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /inference="alignment:Splign:2.1.0"
     exon            708..795
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /inference="alignment:Splign:2.1.0"
     exon            796..857
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /inference="alignment:Splign:2.1.0"
     exon            858..998
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /inference="alignment:Splign:2.1.0"
     exon            999..1124
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /inference="alignment:Splign:2.1.0"
     exon            1125..1257
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /inference="alignment:Splign:2.1.0"
     exon            1258..1348
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /inference="alignment:Splign:2.1.0"
     exon            1349..1541
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /inference="alignment:Splign:2.1.0"
     exon            1542..1702
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /inference="alignment:Splign:2.1.0"
     exon            1703..1921
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /inference="alignment:Splign:2.1.0"
     exon            1922..2148
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /inference="alignment:Splign:2.1.0"
     exon            2149..2417
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /inference="alignment:Splign:2.1.0"
     exon            2418..2836
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /inference="alignment:Splign:2.1.0"
     exon            2837..2940
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /inference="alignment:Splign:2.1.0"
     exon            2941..3137
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /inference="alignment:Splign:2.1.0"
     exon            3138..3347
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /inference="alignment:Splign:2.1.0"
     exon            3348..3761
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /inference="alignment:Splign:2.1.0"
     exon            3762..4040
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /inference="alignment:Splign:2.1.0"
     exon            4041..4778
                     /gene="LOC4333337"
                     /gene_synonym="DCL2A; OJ1785_A05.30; OsDCL2a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
cgcgcgcgcgactcgtaggaattcggttcggattcgtgcgtgcaccgaaggaggcggaggcggaggcggcccaagcgtcggcgccacctcactctcccacccccatcccgccgcctcccccgattcctcccccaaacccctcctcctcctccgccgccgccgccgtcgccatgggtggccccctcaccgccgccggaggtcgaggagatgggggcgccaaggcggtggaaccgctccggcctccgccgccgcccgacccgaagacaatggccagatggtaccagctggaggcgctggagcgggcggtgcgggggaacaccctggcgttcctggagaccgggagcgggaagacgctcatcgcggtgatgctgctccgggcgtacgcgcaccgcgtgcggaggccggactcgcgccgcttcgccgtcttcctcgtccccaccgtcgtcctcgtgggccagcaggcgcgcgtcgtcgagcagcacaccgacctcgtcgtcaagcagttctgcggcgagatgggggtcgacttctgggacgccgccacctggcgatcccaactggaggacggcgaggtgctcgtcatgacgccgcagatcctgctcgacaacctccgccacagcttcttccgcctccaggacatcgcgctgctcatcttcgacgagtgtcaccacgccaggggcaatacgccgtacgcctgcattttcaaggaattttatcacccccagttgaattctagtgcgtcagaccctctgccaaggatatttgggatgtctgcttcgctcatttattcaaaagatttgaatccgcacaattattcaaagcaaatttctgagattgagaatctcatgaattccaaggtgtacactgttgatagtgaatcagctttgtcggagtacataccatttgcttctacaaaaatagtggactttgacgattccaacatttcatctgagctgcatgccaatattctcagttgtttgaatagattgaataaaaagcatatagaagctctggacagaaaactacatggttcatctctggaaaacgctaagcaaaggatatcaaaattgcatcatacatttgtatattgtttatataatctaggagtatggctggcagcaaaggctgctgaggtacaatcatacgaggaaaacagcctatccttctggggtgaaacattggataaaaatgttgagggcttcattagaaactacagcgaagaagtacatagagaactttcatgtttcttgaagaatggtcatattggtgaaaaatttccagctgattctcaagatgggatattgacacccaaagttcattgccttattcgaactcttctgcagtacaggcatatgcaagacttaagatgcattgtgtttgttgagagagttatcacaagcatagtattagagcacctactttcatctattcatcaaatgtctgggtggaatgttaagcacatggcaggaagccgtcctggtttgctatctcagagcaggaaaaatcatacagaaattgttgaatcttttcgaaaaggaaaggtacatataattattgccacacaaattttggaggagggtttagatgtgccaagttgtaacttggtaattcgctttgatccatcagcaacagtatgcagctttatacagtcccgtggtcgagctaggatggaaaactctgactatcttttacttgtcggaaggggggatgtggaagctcaaactaatgcagagaagtttctcgcaagtgggcaaataatgcgggaggaatctctgagattgggatcaatttcttgtcaaccacttgagaacaccttgtgcgaggatacctattaccgtgtcgagtcaactagagcaattgtgacactaaactccagcgttccattaattcattttttctgctcaaagcttccatcggatgaatattttaatcctctaccaagattcgatatagacaaggcatctggcacatgcactctgcatcttcctaagagcagtcctgtgcagacagttaatgtagaaggagaaggttctattctcaaggagacagtttgtcttaaggcctgccaagaactacatgccattggtgcactcacagattctcttttaccagaattagatgttccatgtgatgaagaacctgacatcgttgttgagaacaaaattgagcagccttcttactttccagaagaatttgtggataattggcgctccttttctcgtcttggcatatattattgctataagatctcattggaaggatgtcccaaaacagcttctccaactgacatactgttagctttgaagtgtgatttgggatctgactttacttctagctcatttaaattgccaggtgggcaagacaatgctagtgttaccatgaaatatgttggcatcatccatctcaatcaagaacaggtaattattgctagaagatttcagacaactattctttcgtttcttattggtgatgaccatttggaggttagcaatggtattaaatacttccatgagatgcaagtgcctattggagtagtctatctacttctgcctttagtttctggcagaattgattggtgcagtatgaagttctcatcctcaccaatatatgaagctaacaacaaacatatgacacattgccattcttgtaaagatattgatttactgcagacaaaagatggtcctttctgcaggtgcatccttaaaaattccattgtgtgtacccctcataataacatcttttatgttattagtgggtttcttgacttagatgcaaattcctgtttgcctcaacatgatgggactgttgttacctacaaagattattttaagactaggcatggtcttactttgacttttgaaaatcagccgctcttggctggcagtaaacatgtgaaagtgcggaacttcctccacaactgctactctaaaaaagaaaaagaacctggtgatagatatagtgttgagttgccacctgaactctgcagaattatcatgtcaccagtgtccgccaataatttgcacatcttctcatatgttccttccataatgttccgcatccagtgcatgcttctttctgtgaaattaaaggtccaattaggcccaacagtgcagcagtttgacgtaccggttttgaagatcctggaagcattaacaacaaagaaatgccaagaagaattttcacaggaatcattagaaacacttggggattctttcctcaaatatgttacaactcggcacctttttagtgaatacaggcttcaacatgaaggcatattaacaaaaatgaagaaaaacttgatctccaatgcagctctgtgccagctggcctgcagcagtaatcttgtgggttacattcatgctgaggagtttaatccaagagattggatcatcccttgcttggactatgatgagcgtgataacaaaaaaatttcctttctggcacccaatggtatgtacagccaaaggaaaatgtctattaaaagtaagaggattgcggattcagttgaggccttaattggggcttacctcagtactgctggggaaaaggcagcatttcttttgatgaaatcattagggatgaatatagaatttcacactgaaattccagttgaaaggaaaatttcaatgaaagctgaagagttcattaatgtgaggagcttagagggaatgcttggttacaagttcaatgattctttattattgctcgaagcattgacacatggctcatatcagacttctggccctacttcatgctatcagaggctcgagtttcttggagatgctattttggatcatcttttcactgaatattactacagcaaataccctgactgtactccagaattgttgacagatcttagatctgcctctgtgaacaacaattgttacgcgcatgcagctgttaaatcaggattaaacaagcatatccttcactcatcatcagaactgcataggaagatgagctactaccttgaggaatttgggcagtcatttacaggtccatcttatggctgggaagcgggcattggtctaccaaaggttctcggggatgtgattgaatcaatagctggtgccatttatctcgacagcaagtgtgacaaggaggttgtttggagaagcatgaagcggctattggaacctcttgccacccccgaaaccatcgagcctgacccggtgaaagggctgcaagaattttgtgatcgtagatcattcaaaataacctacgaaaaaaaccatgttgatggagtctcatcggtcattgctcgggtgaaggctggagagactacatactccgcaacaaaatcaggtccctgcaagttggtggcgaaaaagttggcatcaaaggctgtgcttaaagatctgattgctggtcacaaagatacagaggctgctgcagtatagtgatacttaactatttaagcgtgcaacagtagctaacaattgatatagatagttgcgcacaatagaaaagttttggttggattcatacatgtaatttggaaatgctcctttttgtgtgctcgcaaacgatgcgtgtgaacggcctcatgaattctggtaggttttcatgcttcaaacttacaagtatcgcaattttgtaaattacaaatacgggcatagcacacctgcccatgccatgcagtagttttttttttcctcgaaatagtagcattagttgtatattactcatagcatcagattgtacagaaagcatgccagcaaaaacgaaaaaatgtacagacagcattttgttcgcatcaagggaaaacttgtttt
//

by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]