LOCUS       XM_054360298           22128 bp    mRNA    linear   PRI 26-AUG-2024
DEFINITION  PREDICTED: Homo sapiens argonaute RISC catalytic component 2
            (AGO2), transcript variant X2, mRNA.
ACCESSION   XM_054360298
VERSION     XM_054360298.1
DBLINK      BioProject: PRJNA807723
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_060932) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_009914755.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22128
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /isolate="CHM13"
                     /db_xref="taxon:9606"
                     /chromosome="8"
                     /sex="female"
                     /cell_line="CHM13htert"
                     /tissue_type="hydatidiform mole"
                     /note="haploid cell line"
     gene            1..22128
                     /gene="AGO2"
                     /gene_synonym="CASC7; EIF2C2; LESKRES; LINC00980; PPD;
                     Q10"
                     /note="argonaute RISC catalytic component 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 mRNAs, 28 ESTs, 3274 long SRA reads, 3 Proteins, and
                     98% coverage of the annotated genomic feature by RNAseq
                     alignments, including 8 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:27161"
                     /db_xref="HGNC:HGNC:3263"
                     /db_xref="MIM:606229"
     CDS             7716..10235
                     /gene="AGO2"
                     /gene_synonym="CASC7; EIF2C2; LESKRES; LINC00980; PPD;
                     Q10"
                     /codon_start=1
                     /product="protein argonaute-2 isoform X2"
                     /protein_id="XP_054216273.1"
                     /db_xref="GeneID:27161"
                     /db_xref="HGNC:HGNC:3263"
                     /db_xref="MIM:606229"
                     /translation="

MPLCSSVRLRWENGLTADLALALAPPAPPPPIQGYAFKPPPRPDFGTSGRTIKLQANFFEMDIPKIDIYHYELDIKPEKCPRRVNREIVEHMVQHFKTQIFGDRKPVFDGRKNLYTAMPLPIGRDKVELEVTLPGEGKDRIFKVSIKWVSCVSLQALHDALSGRLPSVPFETIQALDVVMRHLPSMRYTPVGRSFFTASEGCSNPLGGGREVWFGFHQSVRPSLWKMMLNIDVSATAFYKAQPVIEFVCEVLDFKSIEEQQKPLTDSQRVKFTKEIKGLKVEITHCGQMKRKYRVCNVTRRPASHQTFPLQQESGQTVECTVAQYFKDRHKLVLRYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIRATARSAPDRQEEISKLMRSASFNTDPYVREFGIMVKDEMTDVTGRVLQPPSILYGGRNKAIATPVQGVWDMRNKQFHTGIEIKVWAIACFAPQRQCTEVHLKSFTEQLRKISRDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYAGLQLVVVILPGKTPVYAEVKRVGDTVLGMATQCVQMKNVQRTTPQTLSNLCLKINVKLGGVNNILLPQGRPPVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPNRYCATVRVQQHRQEIIQDLAAMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFQQVLHHELLAIREACIKLEKDYQPGITFIVVQKRHHTRLFCTDKNERGTSRPSHYHVLWDDNRFSSDELQILTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHTSGQSNGRDHQALAKAVQVHQDTLRTMYFA"

     misc_feature    7830..10229
                     /gene="AGO2"
                     /gene_synonym="CASC7; EIF2C2; LESKRES; LINC00980; PPD;
                     Q10"
                     /note="protein argonaute; Provisional; Region: PLN03202"
                     /db_xref="CDD:215631"
     misc_feature    8931..10106
                     /gene="AGO2"
                     /gene_synonym="CASC7; EIF2C2; LESKRES; LINC00980; PPD;
                     Q10"
                     /note="PIWI domain, Argonaute-like subfamily. Argonaute is
                     the central component of the RNA-induced silencing complex
                     (RISC) and related complexes. The PIWI domain is the
                     C-terminal portion of Argonaute and consists of two
                     subdomains, one of which provides the...; Region:
                     Piwi_ago-like; cd04657"
                     /db_xref="CDD:240015"
     misc_feature    order(9342..9344,9354..9356,9390..9401,9408..9410,
                     9432..9434,9441..9443,9453..9455,9465..9467)
                     /gene="AGO2"
                     /gene_synonym="CASC7; EIF2C2; LESKRES; LINC00980; PPD;
                     Q10"
                     /note="5' RNA guide strand anchoring site [active]"
                     /db_xref="CDD:240015"
     misc_feature    order(9546..9548,9552..9554,9762..9764,10074..10076)
                     /gene="AGO2"
                     /gene_synonym="CASC7; EIF2C2; LESKRES; LINC00980; PPD;
                     Q10"
                     /note="active site"
                     /db_xref="CDD:240015"
ORIGIN      

tgcctcccaaagtgctgggattacaggcgtgagccaccgcgcccagccaaaaatgcctttttattgttgctgtgtttgaatcggtatttgtatacacataattagccgttaatttcaacatacctaagcattttcgcttatgtaattttcaagttcttgaacatgaactcccagctggatgaaaggtgccactgagcagagaccagcgtggtgcttctaactttccgacagtacacagcacgctgcactcattctgatgagtttgagaatatatctgctccatcgcgtcgtttccctggtgcgcctcaaggtcttgtggcctacagcagcatttcgtactgtgtctgagcctccggggctgctggggctgcatgacccagagggacatctggtcagaggccaacttagcctctcggccaccttggctagggcctttcatgggcctggatgatgggaccactccatgcagctccttcaccctgagggaggggcagctcatccccgggaggcaggagtcccagcagagggcacagcagaagcagctggcacctttgcaagccctgagggatgcggaacagtcatgcctgtgccatttgccaggcaaggcacatggctgatgtggagtctgtggaagaggccgcacagttgcagggtggagggtgaggacacaaggaggcccccagcccagtccgccacagcagcgtggggctggagcaagcccctcttgagggagtctgttaaatccggccccagtggagctcagacacagctgcagcgcggatgagcctcaaggacagcatgccacatgaggggggccaggcacagagggtcacgtgcgtggctccacctctggaaatgtctagaacaggcagagccattgagacagaatgcaggtgcgtgtgccaaggcctgggctttggaggaaacggggtgtgatggcttagcgggcacgtggcttcttttgggggtgacgaaggtgcccaggaattgggtggttgtgttggttacacaacagtgtggatgtgcgaaaggccacctcagtgtgcactggaaaatggctacggtggtaaatttatctgaattttaacaagaagaaaacaacctggccctggatccctcctcccttgcacacttatcatcccagctccgcaaacacagcccggtgtggaggcaccacgcactccgctttgaggtgtgtgtttttggctgacagacttcccgatgagatctggggttccatcgtctgctgagccgggtccacagggccagattagaccccatctttaatctccgccacgccgccgtgggggcctgagtcaacccgcaccatccgaggctcccaccaattctgggctggtctctgaagttggggccagcagcaggcctgcctttcggatagcaaataatagaaagaaatccataattatgtcatataaaagatgcggccagaacactgcacgtggcacggcctgtgatccaaaatgcgtgcaggcatcgtcgttaacttttcttcagtcctctgaggaagtagaataccatttcgatttgttttaaactgtgagctcgtctctcttcaggaaggaaattgatcaaagaagcaaacactcctggatattttgtctgcttgattttcagcaatttactcctaattaattattctgactaggaaaaaaatggtacctctccaggatgccagtgtttagaattgacatttcaaatagctggttggacaaattggagaaattttctgatttctgtcatttgttaaatttgcttttaagtatccctcagggagctgtattcattccaagtgcggggaattaaagttgaatctccatgcaattgaattagcctgagccacagggatgggctgcagaagcctgctgaagcttacagggagattttacttaaagctaaagcttatttcacggagtctgttctgacggttttctaacgccaccgtgatgtacagtttactgttttattaacattggaacagtacttcttttcacaatgtacagtgattgtaatttaagataaatgtgggagtattcttatacctaaggaaatgctgagtcgaaatgctggatttctaaatatatcactggggagaggacagttttttccctttataatgacagtgttgccaacatgaccttatagctatgtaggctggggatattttgatatgcagtaggaaaatgtcacagaagagataacatcaatagaggctaaattttcccttcatgatatttatttttaacatctattctactctgttaaaaaataaggaccctcatgtgttcatgtggaaaacatagtgactagggagagagggatgtgctcattgcgatggatgaagttcttaaaacaaatacatgcaaacgcagtggttcttggaggaatccaagccctgtagaagcttatttttccttcatgtaaatttccagggctgtgtgggcttagctgctctgctccatgcagctattcagggattcaggctgcagggcatcttcaacccaaaggggaaagaccgtggaggaggaggctgtgaggtttctgtgtgctggcccgccgctgacctgcctatcacgtaaacccaccaaagcagggtgccttaacctaggggtagaaaatatttggggggaaaaaagcaataaaaaatattctaaaattttaaagtacagtataataactatttacatagtgtttgttttaggtattataagtaatctagagctgatacaaggtagataggaggatgtgttcaggttctaggcaaacaccaagagatgactctagctggcagacacatgctctgttgctccagaaaaagaagcaaccaggctggggcagacagcccagactgccatggttgcggagcaaagggaaaatcagaacctacctggagaccattcaccatatggttcacatccatcagcctagcacttgccaggcatgattctaagccctggggtagaccaggggggcagaaacagagacatttctctttggggtgtgcctagtgcagggagtactggagatgtagtgtgccaggtggcaagcgctgttgaggcgagcacagcggcgggggggtgctggggctgctgggggcatgcaccgtttttaacaagccagtcagcagtctctaaggaggtgacattgaacaaagacctgaaggaggtgagtgggtgagcaaaccgcagggatttgaggaaagagtagacaggaagtgcaaaggccctggggcaggagcgcattgggtgccttgtggccggacagcctcggaacccgtgggaacctggctgtctccaggtgcagatgagatgccactggggaacttgagagtggagggatgacccagtcgcccttcctggtatctctggctgctgtgtggacacagggggccctggtaggcactgtgaagtgatccagctgggagaagatgatggctgtggcctgcacacaaatggtggaggtgaagtggacagatgtagacacaattcgaattcgggttttttttttttgagacggagcctcactctgttgcccaggctggtgtgcagtggtgtgatctcggctcactgcaacctccacctccccgtcaatcctacggggtcttggtgacccactcactggggtttgaaggaggcagagcagagagaggggacataggacggacgtggcgccagcagacatggaggcctctttccagaaggatgtaattctcctccgaatgggaaaacagagagcgtgttttggatttttttttttttttgacacggagtttcgctcttgttgcccagactggagtgcagtggtgcaatctcggctcactgcaaccactgcctcccaggttcaagcaattctcctgcctcagcctcccaagtagctgggattacaggcatgcgccaccacgcccggctaattttgtatttgtagtagagatggtgtttctccatgttggtcaggctggtctcgaactcccgacctcaggtgatctgcccgcctcggcttcccaaaatgctgggattacaggcgtgagccaccgcgcccggcctgtgttttggatctgtagaccccatgacgctgactcctccgtgtgctgcaggagtctgaacagaggccacagttaacacaaggctgggaagcagaggcctcgccaagtgcaggagtaattaaaggacacatctttcgagtagacttcatacatgtcccacttttgtgccttacagcttttgttgtttgtaaatgacatctttgtaaaaaataacttttctaatcgttgctcacacataggaatgcattgtggttcagcaagctggctggattctttctggctctaacagtgtgcctgccaaggcgtctcatcttcacagaggctgtcacgtcgtctgcatgtgtctttgtgtccatttgccttttaaatcatgagagggcagggcacagtggctcatgcctgtaatcccagcactttgggaggctgagagatccagatcacttgaggtcaggatttcaagaccagcttggccaacacggtgaaaccccatctctgcgaaaaatacaaaagtcagccaggtgtgatggtgggtgcctgtaatcccagctattctggaggccgaggcaggaggatcgcttgaacccggaaggcagaggttgcagtgagccgagattgcgcccctgtactctagcctggggacagactgagaaccttgtctcggggaaaaacaaacaaaaaaatcgtgagagggtcttgatttccagacaggtgaagagatgtagatcatataagggttgtctgcacatcaggcacctcatttagagagatggctttgagcaccccgggtgagcgtgtgaaatttctcacttaggtgatggcctggaccccataggtagtgtaaattcaaaacgcaaacctgggagtgtcggacctggagctgcaggttttagggggttgggggcattcacaggccctcctgcttttcttctttcagctctga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