2024-07-06 08:22:50, GGRNA.v2 : RefSeq release 224 (May, 2024)
LOCUS XM_046918634 10749 bp mRNA linear VRT 01-MAR-2022 DEFINITION PREDICTED: Gallus gallus dicer 1, ribonuclease III (DICER1), transcript variant X1, mRNA. ACCESSION XM_046918634 VERSION XM_046918634.1 DBLINK BioProject: PRJNA698614 KEYWORDS RefSeq. SOURCE Gallus gallus (chicken) ORGANISM Gallus gallus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_052577.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Gallus gallus Annotation Release 106 Annotation Version :: 106 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 9.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..10749 /organism="Gallus gallus" /mol_type="mRNA" /isolate="bGalGal1" /db_xref="taxon:9031" /chromosome="5" /sex="female" /tissue_type="blood" /country="USA: Fayetteville" /lat_lon="36.0822 N 94.1719 W" /collection_date="20-May-2019" /collected_by="Nick Anthony" gene 1..10749 /gene="DICER1" /gene_synonym="dicer" /note="dicer 1, ribonuclease III; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 11 ESTs, 866 long SRA reads, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns" /db_xref="CGNC:8359" /db_xref="GeneID:423437" misc_feature 1 /gene="DICER1" /gene_synonym="dicer" /experiment="COORDINATES: cap analysis [ECO:0007248]" /note="transcription start site" CDS 376..6141 /gene="DICER1" /gene_synonym="dicer" /codon_start=1 /product="endoribonuclease Dicer isoform X1" /protein_id="XP_046774590.1" /db_xref="GeneID:423437" /db_xref="CGNC:8359" /translation="
MKSPALQSLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNKNGKRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSSLEVTESWTKEKWSQEFSKHQVLVMTCHVALTVLRNEYLSLSNINLLVFDECHLAIQDHPYREIMKICEDYPSCPRILGLTASILNGKCDPAELEEKIKKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPYTDKSGLYGRLLRELDEALHFLNDCNISVHSKERDSTLISKQILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTSETETEPIVDDDDVFPPYVLRTDENSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTRELPDHTFYSTLYLPINSPLRASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSLQMLELITRLHQYIFSHILRLEKPALEFKPTEADSAYCVLPLNIVDDSSTLDIDFKFMEDIEKSEARTGIPSTQYTKEMPFIFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTATDAGVGVKSLPADFRYPNLDFGWKKSIDSKSFISIPSSSLVENENYCKHSTIVVPENAAHQGANRTSSAEKHDQMSVSYRTLLDESPSKLQIDVSAELAAINGVSYNKNLANGNCDLVNRDFCQGNQLNYCRQEIPVQPTTSYPIQNLYSSENQPKPSNECTLLSNKYLDGNANRSTSDGCPKMTLTTSTSTALNLSKDKVDSEKNTSSGYSSKTLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNWLPPGYIVNQDKSNTDKWEKDETTKENLLANGKLDYDDDDEEDEDLMWRLPKEETDFEDDFLEYDQEHIKFIDSMLMGSGAFVKKISLSHFSTTDSNYEWKAPKKSSLGNVPFSSDFDDFDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDAGKQSISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKKTDWESTLCATGENCNSEQKNLSPNSVSACIVNSEPSLYKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQMEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVPNS"
misc_feature 499..1092 /gene="DICER1" /gene_synonym="dicer" /note="DEXH-box helicase domain of endoribonuclease Dicer; Region: DEXHc_dicer; cd18034" /db_xref="CDD:350792" misc_feature order(499..510,517..519,568..591,712..714,901..903, 994..996) /gene="DICER1" /gene_synonym="dicer" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:350792" misc_feature order(676..681,748..753,826..828,832..837,844..846, 919..927) /gene="DICER1" /gene_synonym="dicer" /note="nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:350792" misc_feature 1186..1470 /gene="DICER1" /gene_synonym="dicer" /note="Partner-binding domain of the endoribonuclease Dicer; Region: Dicer_PBD; cd15903" /db_xref="CDD:277191" misc_feature order(1201..1206,1213..1215,1219..1224,1399..1404, 1411..1416,1423..1425,1432..1437,1444..1446) /gene="DICER1" /gene_synonym="dicer" /note="Trbp binding interface [polypeptide binding]; other site" /db_xref="CDD:277191" misc_feature 1489..2067 /gene="DICER1" /gene_synonym="dicer" /note="C-terminal helicase domain of the endoribonuclease Dicer; Region: SF2_C_dicer; cd18802" /db_xref="CDD:350189" misc_feature order(1720..1728,1936..1938,1993..1995,1999..2001) /gene="DICER1" /gene_synonym="dicer" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:350189" misc_feature order(1948..1950,1954..1956,2029..2031,2035..2037) /gene="DICER1" /gene_synonym="dicer" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:350189" misc_feature 2263..2529 /gene="DICER1" /gene_synonym="dicer" /note="Dicer dimerization domain; Region: Dicer_dimer; pfam03368" /db_xref="CDD:460900" misc_feature 3031..3399 /gene="DICER1" /gene_synonym="dicer" /note="PAZ domain, dicer_like subfamily. Dicer is an RNAse involved in cleaving dsRNA in the RNA interference pathway. It generates dsRNAs which are approximately 20 bp long (siRNAs), which in turn target hydrolysis of homologous RNAs. PAZ domains are named...; Region: PAZ_dicer_like; cd02843" /db_xref="CDD:239209" misc_feature order(3220..3222,3259..3261,3277..3279,3289..3291, 3343..3345,3367..3369,3373..3375) /gene="DICER1" /gene_synonym="dicer" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239209" misc_feature 4264..>4539 /gene="DICER1" /gene_synonym="dicer" /note="Ribonuclease III family; Region: RIBOc; smart00535" /db_xref="CDD:197778" misc_feature order(4315..4320,4327..4332,4339..4341,4348..4353, 4360..4365,4369..4377,4405..4407) /gene="DICER1" /gene_synonym="dicer" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:238333" misc_feature 5416..5910 /gene="DICER1" /gene_synonym="dicer" /note="Ribonuclease III C terminal domain. This group consists of eukaryotic, bacterial and archeal ribonuclease III (RNAse III) proteins. RNAse III is a double stranded RNA-specific endonuclease. Prokaryotic RNAse III is important in post-transcriptional...; Region: RIBOc; cd00593" /db_xref="CDD:238333" misc_feature order(5476..5481,5488..5493,5500..5502,5509..5514, 5521..5526,5530..5538,5566..5568,5830..5832,5863..5865) /gene="DICER1" /gene_synonym="dicer" /note="dimerization interface [polypeptide binding]; other site" /db_xref="CDD:238333" misc_feature order(5476..5478,5485..5487,5497..5499,5800..5802, 5809..5811) /gene="DICER1" /gene_synonym="dicer" /note="active site" /db_xref="CDD:238333" misc_feature order(5485..5487,5800..5802,5809..5811) /gene="DICER1" /gene_synonym="dicer" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:238333" misc_feature 5923..6111 /gene="DICER1" /gene_synonym="dicer" /note="double-stranded RNA binding motif of endoribonuclease Dicer and similar proteins; Region: DSRM_DICER; cd10843" /db_xref="CDD:380680" misc_feature order(5923..5928,5932..5937,5944..5949,5956..5961, 5971..5973,5986..5994,5998..6000,6004..6006,6055..6066, 6073..6075) /gene="DICER1" /gene_synonym="dicer" /note="putative RNA binding site [nucleotide binding]; other site" /db_xref="CDD:380680" polyA_site 10749 /gene="DICER1" /gene_synonym="dicer" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN
gaagaaggagcggaggagaacgggaggccgcgagcctcgccatgctttggaggggaaggcgcacacacgtgagctcttggaccacccggcagctcccgagcagctgctgtgtcgccttgccgcattggctgatctgtgaacctttcaccttttatctaggttacctagggtgaaacaaaattacaggcttggaaactctggaaaagctcagcatcagtatttgagagccgaagcctgcaaattatgtgattaacctacaagctgatatcatgatgtcaaaatgcagtttggaaagcataagcacagaggctgcagagattaaaacgtaggctgtgctggaacaaaaacgcaatgacagaaacactggatgaatgaatgaaaagccctgctttgcaatccctcagcatggcgggactgcagctcatgacccctgcttcctccccaatgggtccattttttggactaccgtggcaacaagaagcaattcatgataacatttatacgccaagaaaatatcaggttgaactgcttgaagcagctttggatcataatacaatagtctgtttaaacactggctcagggaagacttttattgcagtactactcactaaagagctgtcctatcagatcaggggggatttcaacaaaaacggaaaaagaactgtgttcttggtcaactcagcaaatcaagttgctcagcaagtgtcagctgtcaggacacattcagatcttaaagtgggagagtattcaagtttagaggtaactgaatcatggacaaaagagaaatggagtcaggaattctctaagcatcaggttctggttatgacatgtcatgttgctttgactgttttgagaaatgagtatttatccctatcaaatattaatctactggtgtttgatgagtgccatcttgcaatccaggaccatccataccgtgaaattatgaagatctgtgaggattacccatcttgccctcgaatcttgggattaactgcttccattttaaatgggaagtgtgatcctgctgagttagaagaaaagataaagaaactggagaaaatactaaagagcaatgctgaaactgcaactgatttggtggtcttagatagatatacttctcagccatgtgagattgttgtagactgtggaccatatactgacaaaagtggattgtacggaagactattaagggaattagatgaagcacttcattttctaaatgactgcaacatatctgtacattcaaaggaaagagattctacgttaatttctaaacagatattgtcagactgtcgagctgtgttggttgttctgggaccctggtgtgcagataaggtagctgggatgatggtgagagagctacagaagtatatcaaacatgagcaagaggagctgcacaggaaatttttattgtttacagacactttccttaggaaaatacatgcactctgtgaagagcatttctcacctgcctcacttgacctgaaatttgtaactccaaaagtaataaagctgcttgaaatcttgcgcaaatacaaaccatatgaacggcagcagttcgaaagtgttgaatggtataacaatagaaatcaggataattatgtatcatggagtgattctgaagatgatgatgaagatgaagagattgaggagaaagagaagccagagactaatttcccatctccttttacgaatattttatgtggaattatttttgtggaaagaagatacacagcagttgtactaaataggttgataaaagaagctggcaaacaggatccagaactggcttacatcagtagcaatttcataactggacatggcattggcaagaatcagcctcgtaacaagcagatggaagtagaattcagaaagcaggaagaggttcttagaaaatttcgagcacacgagaccaatcttcttattgctaccagtattgtagaagagggtgttgacataccaaaatgcaatttggtggtgcgttttgatttgcccacagaataccgttcctatgtgcagtcaaaaggaagagctagagcaccaatttccaattatataatgttagcagatacagacaaaattaaaagttttgaggaagatcttaagacatataaagcaattgagaagatcctgagaaataaatgctcaaaatctgttgataccagcgaaactgaaactgaacccattgttgatgatgatgatgtgtttccaccctatgtgctgaggacagatgagaacagtccaagagttactatcaacactgcaattggacacataaataggtactgcgctagattaccaagtgatccatttacacacctagctcccaagtgtaaaacccgagaactacctgatcatacattctactctactctctacctgccaatcaactcacctcttcgagcatcaattgttggtcctccaatgagttgtgcaagattggctgagagagttgtagctcttatttgctgtgaaaaactgcacaaaatcggtgaactggatgaccatttgatgccagttggaaaagaaacggttaaatatgaggaagagcttgatttacatgatgaagaagaaaccagtgtgccaggaagaccaggctctacaaaaagacgacagtgctaccctaaagctattccagaatgtttgagggatagttatcccaaacctgatcagccctgttacctgtatgtaataggaatggtgttaactactccattgcctgatgagctcaactttaggagacgaaagctatatcctcctgaggatacgacgagatgttttggcatattgacagccaaacctatacctcagattcctcactttcctgtgtatactcgctctggagaggttacaatatctattgagcttaagaaatctggttttactttgtctttgcaaatgcttgagctgataacacgactccaccagtacattttctcacatattcttcgtcttgagaaacctgcactagagttcaaacccacagaagctgattcagcctattgtgttctacctcttaacattgttgatgactccagcactttggacattgactttaagtttatggaagacattgaaaagtctgaagcgcgtacaggcattcccagtacacagtatacaaaagaaatgccttttattttcaagttagaagactaccaggatgcagttatcattccacggtatcgaaattttgatcagcctcatcgattctatgtagctgatgtatacactgatcttactccactcagtaaattcccttcccctgaatatgaaacttttgctgaatattataaaacaaaatataatcttgacctgaccaatctcaaccagccgctgctggatgtggaccacacatcttcaagacttaatcttttgactcctcgccatttgaatcagaaggggaaagcacttccactaagcagtgctgagaagaggaaagcaaaatgggaaagtctgcagaataagcagatactggttcctgagctatgtgctatacatcctattccagcatcgttgtggagaaaagcagtttgcctccccagcatactttatcgcctgcactgccttttgacagcagaggaactaagagctcaaacagccactgatgctggcgtaggggttaaatcacttcctgcagatttcagatatcctaacctggacttcggatggaaaaaatctattgacagcaaatctttcatctccatacctagctcctctttggtagagaatgaaaattactgtaagcacagcacaattgtagtccctgaaaatgctgcacatcaaggtgctaatagaacctcttctgcagaaaaacatgaccaaatgtctgtgagttacagaacactgcttgatgagtcacccagtaaactccaaattgatgtctcagcagaacttgcagcaattaatggtgtttcttataataaaaatcttgccaatggcaattgtgatttagttaacagagacttttgccaaggaaatcagctgaattactgcaggcaggaaatacctgtacaaccaactacctcatatcccattcagaatttatacagcagtgagaaccagcccaagcccagcaatgaatgtactctactgagtaataaataccttgatggaaatgctaacagatctacctcagatggatgccccaaaatgacattgaccaccagtacttcaacagctcttaatctttcaaaagacaaagtggattctgaaaagaacacttccagtgggtactcctcaaaaactcttggtcctaatcctggtctcattcttcaggctttgactctttcaaatgctagtgatggatttaatttggagcggctagaaatgcttggtgattcatttttaaagcatgccatcactacatacttgttttgcacttaccctgatgcgcacgagggacggctgtcatacatgagaagtaaaaaagtcagcaactgtaacttgtatcgccttggaaaaaagaaaggactgcctagtcgaatggtggtatcgatttttgatcctcctgtcaattggcttcctcctggttacatagtaaaccaggacaagagcaacactgataaatgggagaaagacgaaacgacaaaggagaatttgttggctaatggtaaacttgattatgatgatgacgacgaagaggatgaagacctaatgtggaggttgcccaaggaagaaacagactttgaagatgattttttggagtatgatcaagagcatatcaaattcatagatagtatgttaatgggatcgggggcttttgtgaagaaaatttctctctctcacttttcaaccactgattcaaactatgaatggaaagcacccaaaaagtcatccctgggtaacgttccgttttcatcagattttgatgattttgactacagctcttgggatgctatgtgctatctggatcctagcaaggctgttgaagaggatgattttgtagtgggtttctggaatccatcagaagaaaactgtggtgtcgatgcaggaaaacagtctatctcatatgatttgcatacagagcagtgtattgctgacaaaagcattgcagactgtgtggaagccctgttgggctgctatctgaccagctgtggtgaaagagctgctcagcttttcctgtgttcactggggctgaaggtgctccctgtaattaaaaagactgattgggaaagcactctgtgtgcgactggagagaactgtaacagtgagcagaagaatctttcaccaaactctgtttctgcttgtatagttaattcagagccttctctttataaagacctggagtatggttgtttgaagatcccaccaaggtgtatgtttgatcacccagatgctgaaaaaaccctgaatcaccttatttctggttttgaaaactttgagaagaaaattaattacagttttaagaacaaggcgtatcttcttcaggcatttactcatgcctcataccattataataccattactgattgttaccagcgcttagaattcctgggagatgcaattttggactacctcataaccaagcacctttatgaagacccacggcaacactcaccaggagttcttactgacctgcgatctgctctagtcaataataccatttttgcatcgctagctgtaaagtatgactaccacaagtacttcaaagctgtctctcctgaactgtttcatgttattgatgactttgtgcagtttcaaatggaaaagaatgaaatgcaaggaatggattcagagctcagaagatctgaagaagatgaagaaaaggaggaagacattgaagtaccaaaggccatgggggatatatttgagtcccttgctggtgccatttatatggatagtggaatgtctttggaaatggtttggcaagtgtactatccaatgatgaggccattaatagaaaagttttctgctaatgtgccccgttccccagtgcgagagctgcttgagatggagccagagacggccaagtttagtcctgcagaaagaacttacgatgggaaggtcagagtaactgtggaagttgtaggaaagggaaagtttaaaggtgttggcagaagctacaggattgccaaatctgcagctgcgagaagagcactacgaagcctcaaagcaaatcaacctcaggtcccaaacagctgagactcctcttaaaataaataaaatgggggaaaaacacattcaaataaagcaaattttttaaaacggtgatgttgagaggaacaaattggaagacagaatttaaagtttgtttgataacagaatagataacaaaacatttaacatgtataaaattttggaactaattgtaggtatagttttttgcgcaaacacaatcttgtcttctttcctcacttctgctttgtttaatcacaagagtgctttaatgatgacatttagcaagtgttcagaataattgttgtcaggtctttttggtttacttttatcgtcagtacagctttgcttagtgttagaaggccagggagcttatgcctaatgcagttgctagatgtatatatagtaatcttgaaattcttcaatctgtgcactagtgccagtcataaagcagttgataaactgtactggatgattgggtataagaaagaataagtgtgccagtattctcgtttgtttttttttatttcctcctacgtgtcatctttttacattaagatggcattcccaatcattattgcacttatttgttagggacagattttaattgaaatggctggcatactggtagaatgagacttcaatttctttatgccacatagtcttgcataaaaaaaaaaaaaaaaaaaaaggttcttgccttaaaaataataaaccctcattaataacctttaatttctgatcttttttggaacaaactattttacattcccgtcattttattatgcattttacaatgatacagctctatatttacagtacaactcattactatagctgtgagttattacaggattataatagaaattgtattcatatatatgtaattaggttatttttaacaattctgaggaggtggttagtctacagatttttttataccataaacaaaatatggtctttggctaaaattccagttttacacaaacctgcaagctagatagttccaatactggaaacagtaatgaataattgtacagtgcaagctgtcattctaacaaaataaccttagacatatcacacctaaaatatgctgcagattttatagtcaattggttacgtatttaacaaacagagcacctttacacttagaaatatttccacgtaaatttcttactgtacttttcagagttgcatgcatatttcacctaccaaagctgtgctgttaaataacatgaaagttgatgtttgagataactgccgtacttttgatacatctgtgatttaggtccttaatttagagaaactagctcattgatgttttgatctactgggggaggggggaaatcatacttttattttttaggctttgcctatacttctttaattagatttatgtaggcactcttcacttaaatacctcagttctttttttcttttcttttttttcttctttttttgcatgcattgttttttctgttttggtgctatgtttatatattatgcttgaaaatttaatttttgcactgtaactataatacctcttaatttacctttttaaaaagctgtgggtctcgtattcccaccaatatcagtagaggtttgctgcaattttgccctgttaattatgcttgaagtttgagaaagcagagcaaggtgttttaacgttttccagcacaatagtttgaacttgatgctgtgtcttatgtattaaattacagataaatactgtatttcctgcttttaaaccctattcctttcctcacaaaatgcacactaaaacaaaacaaaaactgtcagctcttgctttcttaacaacaaaagaaaaaaaagccttagtggcaaggggtaggcattaagcttttctgaaatacagttttcaaaatttcatgtattttctatctcagttaattttgttttaatcctgcaaaaaggactattcttgtatttgagaagaacattgttagagtaggcagagaattaaagtagtagcttgcaaagcagctctcgcatttgtttgttacttcagtaatgaaaatggaacgtgaaattacaagacccgcaagtcttgatgtgtataaaaaaaaatgtaaatgagatggaacagtctaaattttcacaggtaaagtgctttgaggtagcatttttatagaagacaatggattaccaatttaagttttagctcttcctttaggctaggagaaaagtttcttagagaaaatacatgatcgtgaaagttggcaattccgcgcttctcaccagacatcaatcatcagattgatcagaccatctatgaagtgttaagtagttgtaactgcgttacagaagaattaaggttagtctttgaatgcttacgatttcttactgattgtttcaaggctatagattctcaggggtttcaggtgattgttagcagtcatgtggtacagagtgtttttgcaaagaaactgaaccgagtttgctctgtatttcagaacagtttaatgatcactttgttactagataaagcctatgaattggaaatctgaaatgtgtagtggctgactataaagtagtttctgctgctgatgcgtttttaaatgagttttaaatgccgtaatgttttccagtgtgacctcattgaaatattttatatcctttgagatagaaaaatcatagtcgtttccatgttatacatctgtgtgttttacccttcagttgatatgattttgatattggacagtatatactattaaagacctaaatctgatcatttgaaggttgggatagagatcacttgacatgctgtaagcacaagtgtacgcagactgttgcaacccatcttcaaaagcaaccacacggccacacaggctcatcttaaaaatagtgtgggggttagttggcatgaaccttgtttttttgttttgttttgtttttttatctaagtcctgttatactgtactttaaacagtcctcctaactatgctgcgtttttatttttatggcttttttttttttgcgctgttctgttcatgtagcacaaataagcattgcacttggtaccatgctttacctcatttcaaggataaaaaaatgcttaacagagaggaaaaatgtggtttggccttgctgctgttctgatttactgaatttgaaaaagataattatatgcctgcaatgtgtcatttacttgcacaacttaaataggtcatttgcaatgtctgtggcatttttactgtatgtggataaatacgacaaaggggtgtgacaactcttggttgtattttaaagctattgttttttttttactacatcattttactgttatgtgaagtaattaaaattagaatgacctctgacactccagtaattatctctgaacaaaccaacatattatgcatatagcgtagtttctgcaagaagacagtccttagaatttggtcaacctcaactaaatctctgctctgtctgaatatcgagtgtccagtagcgacttctgaagtgtttgttcagcttgatgctgctaaagtccgtacagaaaaagcctgttaatttttagtcttgttatagaatgtgttgtgactgcagagtacagaacttagggaagaattcagaccggttgcagtgctggggagaaatacagtgttggcccagagatgatgtgtgatatatatatatagcagagtatggattcttcttgtaagtaaatacagaactataaactggaaaatggggggggttatgttactgcatatgagataactatgctacatgcatttatctgtatagaaaatgaaatctttgtatcccagtcacagcagcatccataatctgaaagtgacaaatagtgttgagatctgctgtgatgctacacttgcttctgtctgacagtattctgggtttatatgctttggatgggactctctgcaaaaacgttcttttggaaatctctgtattttttatatgagtaaagtgagaaggattttgatttttggtacttaattactgacattgatccttttccaactgctctgattttcaagaagctgatttctttaccttcctgttaggcttaaaacttaaaacactacagtttgtgaccatgaaatgtaatctaaatatcaactgtaactctgtaactcaatctgaattatgttagcaaatatctagaggtcattgtagtatactccactagcagttaaaattaacttttatcaaagctaactacatttcttaaaaataaattttatccaataaactccttgggttttttccctcttttatttgaatggcaaccacagactactttaattgctttgtagatgcactcagaatatactgcagcagcaagttagagagaaaaatgtttgtggacaataattgggaattgcaggcgtttttattgtaaatagtttgactgaaaagatggttaaaatcaagtagaatgaataacaaatataatttgatggacaataaaatatttaccatcacatgctgcagctgtctttaagggacataaaatgtaattcattcatactgtaatcttgctgcagaaatttgcaatctgcaccttatggatcacaattacctttaatagttttttgtaataattgtagctgaatatatctccaataaagttatggtctgttcaccttg
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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