ver.2
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Previous release (v1)
2025-04-07 20:08:14, GGRNA : RefSeq release 229 (Mar, 2025)
Summary:
Results:
Matches are highlighted with green background.
Overlapping matches are dark colored.
gactggtttgaacccaggcttactgtcttgtaatgtactttgcaacatacaacatcaatctaacccaatttcaattgtggtttcttcacaaattaggggacctaatgttgtcatagataacgtttcaattgattttggattaatcaaagttggatcaaaagcaacacagaagttgtatattcgaaacacaactcaactaaatgcatcttggaaactaaacaaatcattagttgacagtaaagccattggaatcaccccatcaagtggtgagctaccatctctagcaaagcaagaggtcaccgtgacctttaaccctatgaccccaagttcgctaaacacaacaatcacccttgatgtggaagggggtgaaagttcaagtgttgccgtcaaatctgaggttcaaaacacacaggtttgctttgaagaatgcctggttgtcttaaaagaaacatttgtatcggttccacaaacaagttctgttgtacttctcaatcaaactttgttcccaaccaagttttccttccaagagttaaaggggaaacagtcagagttctgtgatgtcacagtcttcccaaataagggcatccttggaccacatga...
position 2633
XM_026838759.1 -
Ciona intestinalis (vase tunicate) -
NCBI -
UCSC
gactggtttgaacccaggcttactgtcttgtaatgtactttgcaacatacaacatcaatctaacccaatttcaattgtggtttcttcacaaattaggggacctaatgttgtcatagataacgtttcaattgattttggattaatcaaagttggatcaaaagcaacacagaagttgtatattcgaaacacaactcaactaaatgcatcttggaaactaaacaaatcattagttgacagtaaagccattggaatcaccccatcaagtggtgagctaccatctctagcaaagcaagaggtcaccgtgacctttaaccctatgaccccaagttcgctaaacacaacaatcacccttgatgtggaagggggtgaaagttcaagtgttgccgtcaaatctgaggttcaaaacacacaggtttgctttgaagaatgcctggttgtcttaaaagaaacatttgtatcggttccacaaacaagttctgttgtacttctcaatcaaactttgttcccaaccaagttttccttccaagagttaaaggggaaacagtcagagttctgtgatgtcacagtcttcccaaataagggcatccttggaccacatga...
position 2633
XM_026838760.1 -
Ciona intestinalis (vase tunicate) -
NCBI -
UCSC
gactggtttgaacccaggcttactgtcttgtaatgtactttgcaacatacaacatcaatctaacccaatttcaattgtggtttcttcacaaattaggggacctaatgttgtcatagataacgtttcaattgattttggattaatcaaagttggatcaaaagcaacacagaagttgtatattcgaaacacaactcaactaaatgcatcttggaaactaaacaaatcattagttgacagtaaagccattggaatcaccccatcaagtggtgagctaccatctctagcaaagcaagaggtcaccgtgacctttaaccctatgaccccaagttcgctaaacacaacaatcacccttgatgtggaagggggtgaaagttcaagtgttgccgtcaaatctgaggttcaaaacacacaggtttgctttgaagaatgcctggttgtcttaaaagaaacatttgtatcggttccacaaacaagttctgttgtacttctcaatcaaactttgttcccaaccaagttttccttccaagagttaaaggggaaacagtcagagttctgtgatgtcacagtcttcccaaataagggcatccttggaccacatga...
position 2633
XM_026838758.1 -
Ciona intestinalis (vase tunicate) -
NCBI -
UCSC
Data Export:
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Debug Info:
Redirect URI : https://ggrna.dbcls.jp/en/ci/iubboth%3aaggtcannrtgacct
lang : en |
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query_string : iubboth:aggtcannrtgacct |
format : html |
download :
0.000 | 0.000 | search_start;
0.377 | 0.376 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=((nt:aggtcaaaatgacct)%7C(nt:aggtcaatatgacct)%7C(nt:aggtcaagatgacct)%7C(nt:aggtcaacatgacct)%7C(nt:aggtcataatgacct)%7C(nt:aggtcattatgacct)%7C(nt:aggtcatgatgacct)%7C(nt:aggtcatcatgacct)%7C(nt:aggtcagaatgacct)%7C(nt:aggtcagtatgacct)%7C(nt:aggtcaggatgacct)%7C(nt:aggtcagcatgacct)%7C(nt:aggtcacaatgacct)%7C(nt:aggtcactatgacct)%7C(nt:aggtcacgatgacct)%7C(nt:aggtcaccatgacct)%7C(nt:aggtcaaagtgacct)%7C(nt:aggtcaatgtgacct)%7C(nt:aggtcaaggtgacct)%7C(nt:aggtcaacgtgacct)%7C(nt:aggtcatagtgacct)%7C(nt:aggtcattgtgacct)%7C(nt:aggtcatggtgacct)%7C(nt:aggtcatcgtgacct)%7C(nt:aggtcagagtgacct)%7C(nt:aggtcagtgtgacct)%7C(nt:aggtcagggtgacct)%7C(nt:aggtcagcgtgacct)%7C(nt:aggtcacagtgacct)%7C(nt:aggtcactgtgacct)%7C(nt:aggtcacggtgacct)%7C(nt:aggtcaccgtgacct)%7C(nt:aggtcataatgacct)%7C(nt:aggtcatattgacct)%7C(nt:aggtcatagtgacct)%7C(nt:aggtcatactgacct)%7C(nt:aggtcattatgacct)%7C(nt:aggtcattttgacct)%7C(nt:aggtcattgtgacct)%7C(nt:aggtcattctgacct)%7C(nt:aggtcatgatgacct)%7C(nt:aggtcatgttgacct)%7C(nt:aggtcatggtgacct)%7C(nt:aggtcatgctgacct)%7C(nt:aggtcatcatgacct)%7C(nt:aggtcatcttgacct)%7C(nt:aggtcatcgtgacct)%7C(nt:aggtcatcctgacct)%7C(nt:aggtcacaatgacct)%7C(nt:aggtcacattgacct)%7C(nt:aggtcacagtgacct)%7C(nt:aggtcacactgacct)%7C(nt:aggtcactatgacct)%7C(nt:aggtcactttgacct)%7C(nt:aggtcactgtgacct)%7C(nt:aggtcactctgacct)%7C(nt:aggtcacgatgacct)%7C(nt:aggtcacgttgacct)%7C(nt:aggtcacggtgacct)%7C(nt:aggtcacgctgacct)%7C(nt:aggtcaccatgacct)%7C(nt:aggtcaccttgacct)%7C(nt:aggtcaccgtgacct)%7C(nt:aggtcaccctgacct))?source=Ciona intestinalis (vase tunicate)?to=0&format=json
0.531 | 0.154 | search_done; http://172.18.8.71:7700/v1/refseq/query?q=((nt:aggtcaaaatgacct)%7C(nt:aggtcaatatgacct)%7C(nt:aggtcaagatgacct)%7C(nt:aggtcaacatgacct)%7C(nt:aggtcataatgacct)%7C(nt:aggtcattatgacct)%7C(nt:aggtcatgatgacct)%7C(nt:aggtcatcatgacct)%7C(nt:aggtcagaatgacct)%7C(nt:aggtcagtatgacct)%7C(nt:aggtcaggatgacct)%7C(nt:aggtcagcatgacct)%7C(nt:aggtcacaatgacct)%7C(nt:aggtcactatgacct)%7C(nt:aggtcacgatgacct)%7C(nt:aggtcaccatgacct)%7C(nt:aggtcaaagtgacct)%7C(nt:aggtcaatgtgacct)%7C(nt:aggtcaaggtgacct)%7C(nt:aggtcaacgtgacct)%7C(nt:aggtcatagtgacct)%7C(nt:aggtcattgtgacct)%7C(nt:aggtcatggtgacct)%7C(nt:aggtcatcgtgacct)%7C(nt:aggtcagagtgacct)%7C(nt:aggtcagtgtgacct)%7C(nt:aggtcagggtgacct)%7C(nt:aggtcagcgtgacct)%7C(nt:aggtcacagtgacct)%7C(nt:aggtcactgtgacct)%7C(nt:aggtcacggtgacct)%7C(nt:aggtcaccgtgacct)%7C(nt:aggtcataatgacct)%7C(nt:aggtcatattgacct)%7C(nt:aggtcatagtgacct)%7C(nt:aggtcatactgacct)%7C(nt:aggtcattatgacct)%7C(nt:aggtcattttgacct)%7C(nt:aggtcattgtgacct)%7C(nt:aggtcattctgacct)%7C(nt:aggtcatgatgacct)%7C(nt:aggtcatgttgacct)%7C(nt:aggtcatggtgacct)%7C(nt:aggtcatgctgacct)%7C(nt:aggtcatcatgacct)%7C(nt:aggtcatcttgacct)%7C(nt:aggtcatcgtgacct)%7C(nt:aggtcatcctgacct)%7C(nt:aggtcacaatgacct)%7C(nt:aggtcacattgacct)%7C(nt:aggtcacagtgacct)%7C(nt:aggtcacactgacct)%7C(nt:aggtcactatgacct)%7C(nt:aggtcactttgacct)%7C(nt:aggtcactgtgacct)%7C(nt:aggtcactctgacct)%7C(nt:aggtcacgatgacct)%7C(nt:aggtcacgttgacct)%7C(nt:aggtcacggtgacct)%7C(nt:aggtcacgctgacct)%7C(nt:aggtcaccatgacct)%7C(nt:aggtcaccttgacct)%7C(nt:aggtcaccgtgacct)%7C(nt:aggtcaccctgacct))?source=Ciona intestinalis (vase tunicate)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.535 | 0.004 | cgi_end;
GGRNA ver.2 by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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