LOCUS       XM_073629719            1930 bp    mRNA    linear   VRT 30-APR-2025
DEFINITION  PREDICTED: Aquarana catesbeiana vimentin (VIM), mRNA.
ACCESSION   XM_073629719
VERSION     XM_073629719.1
DBLINK      BioProject: PRJNA1254292
KEYWORDS    RefSeq.
SOURCE      Aquarana catesbeiana (American bullfrog)
  ORGANISM  Aquarana catesbeiana
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Amphibia; Batrachia; Anura; Neobatrachia; Ranoidea; Ranidae;
            Aquarana.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_133328) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_042186555.1-RS_2025_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/24/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1930
                     /organism="Aquarana catesbeiana"
                     /mol_type="mRNA"
                     /isolate="2022-GZ"
                     /specimen_voucher="2022-GZ-LITCAT-MUSCLE-01"
                     /db_xref="taxon:8400"
                     /sex="female"
                     /tissue_type="muscle"
                     /dev_stage="adult"
                     /geo_loc_name="China: Qingyuan Yangshan, Guangdong
                     Province"
                     /collection_date="2022-01"
                     /linkage_group="LG05"
     gene            1..1930
                     /gene="VIM"
                     /note="vimentin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 mRNA, 12 Proteins"
                     /db_xref="GeneID:141144242"
     CDS             81..1484
                     /gene="VIM"
                     /codon_start=1
                     /product="vimentin"
                     /protein_id="XP_073485820.1"
                     /db_xref="GeneID:141144242"
                     /translation="

MSIKSSSYKRIFGGNPRSSSSSSGSRYVTSSNRYSLGSALRSGGGGGGGLSSSRAVFSSSSPSIYKSSSVRLRSSLPPARLHDTVDFTLADAINLEFKANRTNEKAEMQELNDRFANFIDKVRFLEQQNKILLAELEQLKGKGTSRVGDLYEEEMRDLRRQVDLLTNEKARVEVDRDNMADDLQRLRERLQDEMIQKEEAENNLQSFRQDVDNASLARIDLERKLESLQEEIIFLKKLHDEEIRELQAQIQEQHVQIDMDVAKPDLTAALRDVRQQYENVASKNLQDAEEYYKSKFADLSEAANRNNDALRQAKQEANEYRRQIQALTCEVDAMKGSNESYERQMREMEENFALESANYQDTNNRLQEELQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRITIPVSTFSTMSLRETNLDSHPVESHSKRTLLIKTVETRDGQVINESSQHHDDYED"

     polyA_site      1930
                     /gene="VIM"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

atataagccaccctagatgccacttctctctcctgctttagctctgcctgctgggatcttctataacttcgctcatcaagatgtccatcaagtcttcatcctacaagaggatcttcggggggaaccccaggtccagctccagctcctccggcagccgctatgtcacctccagcaacaggtactccctgggcagtgccctccgctccggcggtggtggcggcggtggtctgtccagcagcagggcagtcttctcctcctcctccccgtccatctacaagtcctcctcggtcaggctgaggagcagcctccccccagcccggctccacgacaccgtggacttcaccctggcagatgccatcaacctggagtttaaagccaacaggaccaacgagaaggctgagatgcaggagctcaacgacaggttcgccaacttcatagacaaagtccgattcctggagcagcagaacaagatcttgctggctgagctggagcagctgaagggcaaaggaacatccagggtgggcgatctgtacgaagaggagatgagggaccttcgcaggcaggtggacctcctcaccaacgagaaagccagagtggaagtggacagggacaacatggccgatgatctccagagactcagagaaaggctgcaagatgaaatgattcagaaggaagaggctgaaaacaacctgcagtcattcagacaggatgttgataatgcatctctggcacgtatcgacttggaacgcaaactggaatccctccaggaggagatcatcttcctgaagaagttacatgatgaagaaatccgtgaacttcaagctcaaatccaagaacaacacgtacagatagacatggatgtggccaagcctgaccttaccgcagctctgcgtgatgtccgtcaacagtacgagaacgttgcttctaagaacctgcaagatgccgaagaatattacaagtctaagtttgctgatctgtctgaagctgctaaccgcaacaatgatgccttgcgccaggctaagcaagaggccaatgaataccgccggcagatacaggctctcacctgtgaggtggacgcaatgaagggatctaacgagtcttacgagcgccagatgcgtgagatggaagagaacttcgcccttgaatctgctaactaccaggacactaataaccgccttcaggaagagctccagaacatgaaggaggagatggcccgccacctccgcgagtaccaggatctgctcaacgtaaagatggctcttgatatcgagattgccacttacaggaaactgctggagggagaagagagcagaattaccattccagtctctaccttctccaccatgagcttgagagaaaccaaccttgactctcacccagtagagagccattctaaaagaacacttctgatcaagactgtggagaccagagatggacaggtcattaacgagagctcccagcaccacgatgattatgaggactgaagacacccttttgaaccctagaaaaccttgaccagcaacattttcttgtcccttgtgtttcaaccttgaagaaaaccagcttttcaagtgccttatgctgataattcaggaacgggagatagacctcctatagaaatgaggttggcggattgcatactctccagctgtgggggaacttaatgtcccagcatgcctctggctggaagtgcattctgggactcctgtttcaccacaccttgagagccgcaggtctgcttggcctgctaaatagagtaattagccactggatttccagggagtagagtccatactgaatgacagtggtctagtttacagacaatataagagcaatatgttgtgccgcaatactgtttttaaaaaagtcccaagaaagctttttacttccaagcaacctttaagtgctttaataaatctttagaaataaa

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