LOCUS       XM_072749428            2028 bp    mRNA    linear   MAM 01-APR-2025
DEFINITION  PREDICTED: Vulpes vulpes vimentin (VIM), mRNA.
ACCESSION   XM_072749428
VERSION     XM_072749428.1
DBLINK      BioProject: PRJNA1241828
KEYWORDS    RefSeq.
SOURCE      Vulpes vulpes (red fox)
  ORGANISM  Vulpes vulpes
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae;
            Vulpes.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_132781) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_048418805.1-RS_2025_03
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 03/26/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2028
                     /organism="Vulpes vulpes"
                     /mol_type="mRNA"
                     /isolate="BD-2025"
                     /db_xref="taxon:9627"
                     /chromosome="2"
                     /sex="female"
                     /cell_line="fibroblast"
                     /tissue_type="cell line"
                     /dev_stage="adult"
                     /geo_loc_name="Russia: Novosibirsk"
                     /collection_date="2008"
     gene            1..2028
                     /gene="VIM"
                     /note="vimentin; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1157 long SRA reads, 20
                     Proteins"
                     /db_xref="GeneID:112932963"
     CDS             307..1707
                     /gene="VIM"
                     /codon_start=1
                     /product="vimentin"
                     /protein_id="XP_072605529.1"
                     /db_xref="GeneID:112932963"
                     /translation="

MSTRSVSSSSYRRMFGGPGTGSRPSSTRSYVTTSTRTYSLGSALRPSTSRSLYASSPGGAYATRSSAVRLRSSVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDKVRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDEEIQELQAQIQDQHVQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRIALPLPNFSSLNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE"

     polyA_site      2028
                     /gene="VIM"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

gacgcggagggaggctcgagggcgcccccgccccggcccccgcccccctccccgctcctcgtccggtccccattggctggcgcggcctgcggctgggatggcagtgggagggggccccggttccgaacgggttataaaaactgcgccctcggcggggcccagtcctccgccactctcgctccgggtccccgcgccagagccgcagccgcgcgcccgccgcccgcagccaccgcgccctcgctcgccggtccccccgagccggtccgtgccgccgcagccgcgcagcccgccgccgccctccgcaccatgtccaccaggtctgtgtcctcgtcctcctaccgcaggatgttcggcggcccgggcaccgggagccggccgagctccacgcggagctacgtgaccacgtccacccgcacctacagcctgggcagcgcgctgcgccccagcaccagccgcagcctctacgcctcgtccccgggcggcgcgtacgccacgcgctcctccgcggtgcgcctgcggagcagtgtgcccggcgtgcgtctgctgcaggactcggtggacttctcgctggccgacgccatcaacaccgagttcaagaacacgcgcaccaacgagaaggtggagctgcaggagctgaacgaccgcttcgccaactacatcgacaaggtgcgcttcctggagcagcagaacaagatcctgctggccgagctcgagcagctcaagggccagggcaagtcgcgcctgggggacctctacgaggaggagatgcgggagctgcgccggcaggtggaccagctcaccaacgacaaggcccgcgtcgaggtggagcgcgacaacctggccgaggacatcatgcggctgcgggagaagttgcaggaggagatgctccagagagaggaagccgagagcaccctgcagtctttccgacaggatgttgacaatgcttctttggcacgtcttgaccttgagcggaaagtggaatccttgcaagaagagattgcctttttgaagaaactacatgatgaggaaatccaggagctgcaggcccagattcaggaccagcatgtccaaatcgatatggatgtttccaagcctgacctcacggctgccctgcgtgatgtacgccagcaatatgaaagcgtggctgccaagaaccttcaggaggccgaggaatggtacaagtccaagtttgccgacctctctgaggctgctaaccggaacaatgatgccctgcgccaggcgaagcaggagtcaaatgagtaccggagacaggtgcagtccctcacctgcgaagtggatgcactcaaagggactaatgagtctctggaacgccagatgcgtgaaatggaagagaactttgccgtcgaagctgctaactaccaagacactattggccgcctgcaggatgagattcagaacatgaaggaagaaatggctcgtcaccttcgggagtaccaggacctgctgaatgttaagatggctcttgacattgagattgccacctacaggaagctgctggaaggcgaggagagcaggattgctctgcctcttccaaacttttcttccctgaacctgagggaaaccaacctggattcactccctctggttgacactcactcaaaaagaacgcttctgattaagacggttgaaactagggatggacaggttatcaacgaaacttctcagcatcatgatgaccttgagtgaagcttgcccagattcggtgcagcaattattaccagcaagaattaaaaaaaagaaatccgtatcttaaagaaacagctttcaagtgcctttctgcagtttttcaggagcgcaagatagatttggaattaggaataacctctagttcttaagaaccaacactcttaaaagatttaggagaaagtttacaacataatctagtttacgaagaaaacttgtgctagaatactttttaaaaagtatttttgaataccattaaaactgcttttttccaacaagtatctgaccaacttgtttctgcttcaataaatctttggaaaactc

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