2025-10-09 13:24:03, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_072664255 1968 bp mRNA linear VRT 28-MAR-2025 DEFINITION PREDICTED: Salminus brasiliensis vimentin-related 2 (vimr2), mRNA. ACCESSION XM_072664255 VERSION XM_072664255.1 DBLINK BioProject: PRJNA1242384 KEYWORDS RefSeq. SOURCE Salminus brasiliensis (dorado) ORGANISM Salminus brasiliensis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Salmininae; Salminus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_132896) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030463535.1-RS_2025_03 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 03/27/2025 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1968 /organism="Salminus brasiliensis" /mol_type="mRNA" /db_xref="taxon:930266" /chromosome="19" gene 1..1968 /gene="vimr2" /note="vimentin-related 2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:140541563" CDS 1..1194 /gene="vimr2" /codon_start=1 /product="keratin, type II cytoskeletal 7" /protein_id="XP_072520356.1" /db_xref="GeneID:140541563" /translation="
MAMLRVSSYRKLFEKQQWSQAAAVSQRCGAQLLRSSARGGVSMAECSEPDFPAAHALNREGVVRFAQERSTIAALNDRLAVLIDVARCLEEENESLEFQIIELEERLGTKPSSSTSLSVTCPADFSLDAVIERLRKEKEEILCDTEVLKTELQSMQMKYDEVVEQRTLIQLEREDVAVDVDAVTADCLALRDQVAIYEEQLAEMERQHELRVESLAEPQAGDKEASTVALQFPSIDITPAIMDIKEYYCHLAESLQFESRASAVAAITAGGEEEGKEKQKRLEKLTGGKVKDASKVTDVNVLKDLIAELQKEVAELEKHGEELEAEIEAKREAHLLKIEELEACICQLEEEEADLQAQMKEQTGDYDELLNEKMSLDIEIAAYRGLVEEEEERLCYL"
ORIGIN
atggcaatgctgagagtttcatcgtaccgcaagttgtttgagaagcagcagtggagccaggccgcagcggtcagtcagcgctgtggagcccagcttctccgctcttctgccaggggtggagtgtcgatggcagagtgttccgagccggacttcccagcagctcatgctctaaacagggagggtgtggtgcgatttgcccaggagcgctccacaattgctgccctcaacgaccgcctggctgtccttatcgatgtggcacgctgtctggaggaggagaatgagtctctggagtttcagatcattgaactggaggagagactgggaaccaagccgagctcctccacttccctcagtgtcacctgccctgcagacttcagtttggacgccgttatagagagactgcgcaaagagaaggaggagattttatgtgacacggaagtgctaaagacagagctgcagtccatgcagatgaagtatgatgaggtcgtggagcagcgaactctcattcaactggagcgcgaggatgttgccgtggacgtggacgccgtcactgcagactgcctggcactcagagatcaagtggccatttacgaagagcagctggctgaaatggagcgacagcatgagctgagagttgagagtctagctgaacctcaggctggagataaagaagcttctactgtggctttgcagttcccctccattgatatcactccagccatcatggatatcaaggaatactactgccacctggctgagagcctacagtttgagtccagagcctctgctgttgccgccatcactgccggcggagaggaagagggaaaggagaagcagaagcggttggaaaagctgaccggcgggaaagtgaaggatgcctccaaagtcacggacgtgaacgtgctgaaggatttgattgctgagctgcagaaggaagtagctgagctggagaagcatggtgaggaactggaggcagagattgaagcaaagagagaggctcatctgttaaagatagaggagctggaagcctgcatctgccagctggaggaagaagaggctgacctgcaggctcaaatgaaggagcagacgggagactatgatgagctgctcaatgagaagatgtcactggacatagaaattgctgcctacaggggtttggtggaggaggaagaggagagactttgctacctgtgagtggacgggagaggagagagagagagagagagagaggagagagtggcccaggcccaaacacagacactctcttgtggattggtgcagaaaaagtgaaagctaacatagacttacttcagccgtaaaaagtgagtcaggcaagctaaaaaaagcatcagacgcagccatctgagcaaacacagacctccaacaacagataaatggcatctgggctgtctttccagaccattgataatgcttgcaacagtcagtggcaagtaatctcaggtcctgaaagacagtcctggctgtgctgtgctgtgtggggtgaggaggtgggaggttctctgtctaaccaacggtatcgagaatcagcatctgaaattttcaataatgtattttccgggaacctggtatcagcatttctgtctgagatcatgccttggagatctgtaggtcagctacactgacccctacccaaaccttttggacagcaaaatgcacacagacacacccactcactcatgtacagtcctgctgaatcagtcttgactctcatcacgcaacactcaaacactgaccagctgcaatctcttgacctttgccctttcaagctcttttggataactcctggtgataatataagacatgagaacatgccctaaacaagctgatttcatatctgaatgatttttttttattatttgaggtgtctcatgttccccttatacactagtaatgtctcttattcggcttgggactttttttttactgaccctttaagtgtctaacgta
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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