2025-01-31 03:04:12, GGRNA.v2 : RefSeq release 227 (Nov, 2024)
LOCUS XM_067507595 1396 bp mRNA linear VRT 20-AUG-2024 DEFINITION PREDICTED: Channa argus claudin-4-like (LOC137128914), mRNA. ACCESSION XM_067507595 VERSION XM_067507595.1 DBLINK BioProject: PRJNA1148499 KEYWORDS RefSeq. SOURCE Channa argus (northern snakehead) ORGANISM Channa argus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Anabantaria; Anabantiformes; Channoidei; Channidae; Channa. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_090202) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_033026475.1-RS_2024_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/16/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1396 /organism="Channa argus" /mol_type="mRNA" /isolate="prfri" /db_xref="taxon:215402" /chromosome="6" /sex="male" /tissue_type="muscle" /dev_stage="adult" /geo_loc_name="China: Weishanhu" /collection_date="2021-12-20" gene 1..1396 /gene="LOC137128914" /note="claudin-4-like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 285 Proteins" /db_xref="GeneID:137128914" CDS 187..1305 /gene="LOC137128914" /codon_start=1 /product="claudin-4-like" /protein_id="XP_067363696.1" /db_xref="GeneID:137128914" /translation="
MVSAGMQMLGTALAIIGWIGAIIACALPQWKVTAFIGQNIVTAQTNWEGIWMSCVVQSTGQMQCKVYDSMLALSQDLQAARALMIICILTGILGILLAMVGGKCTNCVEDEGAKAKVGVAAGAVLIVTGVLCLIPVCWTANTIIRDFYNPLVMSSQKMDLFVMVSQGVQMMGIWMTFIGWFMVIVACALPMWKVSAFIGANIITAQIVWQGLWLNCVVQSTGQMQCKVYDSMLALPQDLRAARGMMVMSIVTGVWGVVLSIIGGKCTNCIKDERTKAKACILGGIVFLLSGMLCIIPVSWCASTVITDFYNPMLMKAQKYELGAALYIGWAAATLLLMGGGLLCWNCPPKHEAHRVPIFTPLKLISPLTEEV"
misc_feature 199..639 /gene="LOC137128914" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" misc_feature 685..1185 /gene="LOC137128914" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:473919" ORIGIN
acacgtaacacagtgtgtgcttttcaaaccccacccgagctcagcatatgtataaaaaccccacttcagccttgctccaacatttactcctgagggacctcacaagagagacatccagagacaacactttgggatcttagtttttttttctttggacaaccgttgcaagaagcttcccgaggagacatggtatcggccggcatgcagatgttgggcactgccctggccattattggctggatcggggccatcattgcctgcgctctaccccagtggaaagtgacggccttcattggccagaacatcgtcacggctcaaaccaattgggagggcatctggatgagctgtgtggtccagagcacaggccagatgcagtgcaaggtttatgattccatgctggccctttcccaagacctccaggctgcccgtgccctcatgatcatctgtatcctgactggcattctggggatcctcctggccatggtcgggggcaagtgcaccaactgtgtggaggatgaaggggccaaagccaaagttggcgtggcagctggtgcggtcctcatcgttaccggtgttttgtgcctcatccccgtgtgctggacagcaaacaccatcataagggacttctacaacccactggtgatgagctctcagaagatggatttatttgtaatggtctctcagggggtccagatgatgggcatatggatgactttcattggctggttcatggtcattgtggcgtgtgccttgcccatgtggaaggtctctgcttttataggggccaacataatcacggctcagatcgtgtggcagggcttgtggctgaactgcgtggtgcagagtaccggccagatgcagtgcaaggtgtacgactccatgctggcgctgccccaggacctgcgggccgctcgaggcatgatggtcatgtcgatcgtgaccggagtctggggagtcgtcctgtcaatcatcggtgggaagtgtactaactgcatcaaggacgagcggaccaaggcaaaagcctgcatcctgggtggcattgtgttcctcctgtcggggatgctgtgtatcattccagtctcctggtgtgccagcaccgtcatcaccgacttctacaacccgatgctgatgaaagcccagaagtatgagttgggagcggcgctgtatatcggctgggcggctgccacactgctgctgatgggaggaggactactgtgttggaactgcccgcccaaacacgaagcccaccgtgtacccatattcacacctctgaagttaatctccccattaacagaagaggtgtaaaacagttagtccttgtacacggacgctgctttaaacgttcccctggactcaaaaatccattgcttataatttaatttgttgagtcttcctc
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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