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2025-01-31 03:04:12, GGRNA.v2 : RefSeq release 227 (Nov, 2024)

LOCUS       XM_067507595            1396 bp    mRNA    linear   VRT 20-AUG-2024
DEFINITION  PREDICTED: Channa argus claudin-4-like (LOC137128914), mRNA.
ACCESSION   XM_067507595
VERSION     XM_067507595.1
DBLINK      BioProject: PRJNA1148499
KEYWORDS    RefSeq.
SOURCE      Channa argus (northern snakehead)
  ORGANISM  Channa argus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Anabantaria; Anabantiformes; Channoidei;
            Channidae; Channa.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_090202) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_033026475.1-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/16/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1396
                     /organism="Channa argus"
                     /mol_type="mRNA"
                     /isolate="prfri"
                     /db_xref="taxon:215402"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="muscle"
                     /dev_stage="adult"
                     /geo_loc_name="China: Weishanhu"
                     /collection_date="2021-12-20"
     gene            1..1396
                     /gene="LOC137128914"
                     /note="claudin-4-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 285 Proteins"
                     /db_xref="GeneID:137128914"
     CDS             187..1305
                     /gene="LOC137128914"
                     /codon_start=1
                     /product="claudin-4-like"
                     /protein_id="XP_067363696.1"
                     /db_xref="GeneID:137128914"
                     /translation="
MVSAGMQMLGTALAIIGWIGAIIACALPQWKVTAFIGQNIVTAQTNWEGIWMSCVVQSTGQMQCKVYDSMLALSQDLQAARALMIICILTGILGILLAMVGGKCTNCVEDEGAKAKVGVAAGAVLIVTGVLCLIPVCWTANTIIRDFYNPLVMSSQKMDLFVMVSQGVQMMGIWMTFIGWFMVIVACALPMWKVSAFIGANIITAQIVWQGLWLNCVVQSTGQMQCKVYDSMLALPQDLRAARGMMVMSIVTGVWGVVLSIIGGKCTNCIKDERTKAKACILGGIVFLLSGMLCIIPVSWCASTVITDFYNPMLMKAQKYELGAALYIGWAAATLLLMGGGLLCWNCPPKHEAHRVPIFTPLKLISPLTEEV"
     misc_feature    199..639
                     /gene="LOC137128914"
                     /note="PMP-22/EMP/MP20/Claudin family; Region:
                     PMP22_Claudin; cl21598"
                     /db_xref="CDD:473919"
     misc_feature    685..1185
                     /gene="LOC137128914"
                     /note="PMP-22/EMP/MP20/Claudin family; Region:
                     PMP22_Claudin; cl21598"
                     /db_xref="CDD:473919"
ORIGIN      
acacgtaacacagtgtgtgcttttcaaaccccacccgagctcagcatatgtataaaaaccccacttcagccttgctccaacatttactcctgagggacctcacaagagagacatccagagacaacactttgggatcttagtttttttttctttggacaaccgttgcaagaagcttcccgaggagacatggtatcggccggcatgcagatgttgggcactgccctggccattattggctggatcggggccatcattgcctgcgctctaccccagtggaaagtgacggccttcattggccagaacatcgtcacggctcaaaccaattgggagggcatctggatgagctgtgtggtccagagcacaggccagatgcagtgcaaggtttatgattccatgctggccctttcccaagacctccaggctgcccgtgccctcatgatcatctgtatcctgactggcattctggggatcctcctggccatggtcgggggcaagtgcaccaactgtgtggaggatgaaggggccaaagccaaagttggcgtggcagctggtgcggtcctcatcgttaccggtgttttgtgcctcatccccgtgtgctggacagcaaacaccatcataagggacttctacaacccactggtgatgagctctcagaagatggatttatttgtaatggtctctcagggggtccagatgatgggcatatggatgactttcattggctggttcatggtcattgtggcgtgtgccttgcccatgtggaaggtctctgcttttataggggccaacataatcacggctcagatcgtgtggcagggcttgtggctgaactgcgtggtgcagagtaccggccagatgcagtgcaaggtgtacgactccatgctggcgctgccccaggacctgcgggccgctcgaggcatgatggtcatgtcgatcgtgaccggagtctggggagtcgtcctgtcaatcatcggtgggaagtgtactaactgcatcaaggacgagcggaccaaggcaaaagcctgcatcctgggtggcattgtgttcctcctgtcggggatgctgtgtatcattccagtctcctggtgtgccagcaccgtcatcaccgacttctacaacccgatgctgatgaaagcccagaagtatgagttgggagcggcgctgtatatcggctgggcggctgccacactgctgctgatgggaggaggactactgtgttggaactgcccgcccaaacacgaagcccaccgtgtacccatattcacacctctgaagttaatctccccattaacagaagaggtgtaaaacagttagtccttgtacacggacgctgctttaaacgttcccctggactcaaaaatccattgcttataatttaatttgttgagtcttcctc
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]