LOCUS       XM_066626710            1343 bp    mRNA    linear   VRT 22-JUL-2024
DEFINITION  PREDICTED: Tiliqua scincoides Meis homeobox 2 (MEIS2), transcript
            variant X4, mRNA.
ACCESSION   XM_066626710
VERSION     XM_066626710.1
DBLINK      BioProject: PRJNA1136870
KEYWORDS    RefSeq.
SOURCE      Tiliqua scincoides
  ORGANISM  Tiliqua scincoides
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Lepidosauria; Squamata; Bifurcata; Unidentata; Scinciformata;
            Scincidae; Egerniinae; Tiliqua.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_089821) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_035046505.1-RS_2024_07
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 07/19/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1343
                     /organism="Tiliqua scincoides"
                     /mol_type="mRNA"
                     /isolate="rTilSci1"
                     /db_xref="taxon:71010"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="heart muscle"
                     /dev_stage="adult"
                     /geo_loc_name="Australia: South Australia, near Adelaide"
                     /lat_lon="34.08575 S 139.05331 E"
                     /collection_date="2019-10-01"
     gene            1..1343
                     /gene="MEIS2"
                     /note="Meis homeobox 2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 11 Proteins"
                     /db_xref="GeneID:136649868"
     CDS             14..1216
                     /gene="MEIS2"
                     /codon_start=1
                     /product="homeobox protein Meis2 isoform X4"
                     /protein_id="XP_066482807.1"
                     /db_xref="GeneID:136649868"
                     /translation="

MFLYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHASQHYGAHAPHPNVMPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPSSWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAGFLLDPSVSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGPMSGMSMNMGMDGQWHYM"

     misc_feature    338..592
                     /gene="MEIS2"
                     /note="N-terminal of Homeobox Meis and PKNOX1; Region:
                     Meis_PKNOX_N; pfam16493"
                     /db_xref="CDD:465140"
     misc_feature    order(854..856,983..985,992..997,1004..1006)
                     /gene="MEIS2"
                     /note="specific DNA base contacts [nucleotide binding];
                     other site"
                     /db_xref="CDD:238039"
     misc_feature    893..1009
                     /gene="MEIS2"
                     /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920"
                     /db_xref="CDD:428673"
ORIGIN      

gcgctcccgagccatgttcctgtacgatgagctgccgcactacggcggcatggacggagtaggggtgccggcgtccatgtacggagacccgcacgctccccggccgatcccgccggtgcaccacctgaaccatgggccgccgctgcacgccagccagcactacggagcgcacgccccgcaccccaacgtcatgccggccagcatgggctcggctgtcaacgacgccctgaagcgggacaaggacgcgatctacgggcaccccctgttccccctcttggcgctggtcttcgagaagtgcgagctggccacctgcacccctcgagagcccggagtggccggcggagacgtctgctcgtcggactccttcaacgaggacatcgcagtcttcgccaagcaggttcgggcagaaaagccacttttttcttcaaaccccgagttggacaatttgatgatccaagcaatacaagtcttaaggtttcaccttttggaattagaaaaggttcatgagctgtgtgataatttctgccaccggtacattagctgtttgaaaggcaaaatgcctatagatctagttatcgatgaaagagatggcagctctaaatccgaccatgaagaactctcaggatcctctacaaatttagccgaccataatccttcctcttggagagaccatgatgatgcaacctcaacgcactcagccggcacgccggggccttccagtgggggccacgcttcccagagtggagacaacagcagtgagcaaggggatggtttagacaacagcgtagcctcacctggcacaggggatgatgatgacccagacaaggataaaaaacgtcagaagaaaagaggaattttccccaaagtagcaacaaatatcatgagagcgtggctctttcagcatctcacacacccatatccttcagaggagcagaagaaacagttagcccaagacacgggacttacaattctacaagtaaacaactggtttattaatgcgcggagaagaatagtacagcctatgattgaccagtcaaatcgagcaggttttcttcttgatccttcagtgagccaaggagcagcgtatagtccagagggtcagccaatggggagctttgtattggatggtcagcaacacatgggaatccggcctgcaggacctatgagtggaatgagcatgaatatgggcatggatggtcaatggcactacatgtaaccctcatcttgtaaaccaatcgcaaagcaagggggaagtttgcaaggcataccaggggactacatatctcagggtggtcctgtgggtatgagtatgacacagcgaagttacactcctccccagatga

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