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2024-11-05 07:04:34, GGRNA.v2 : RefSeq release 226 (Sep, 2024)

LOCUS       XM_065513049             511 bp    mRNA    linear   INV 28-MAY-2024
DEFINITION  PREDICTED: Calliphora vicina uncharacterized LOC135961545
            (LOC135961545), mRNA.
ACCESSION   XM_065513049
VERSION     XM_065513049.1
DBLINK      BioProject: PRJNA1112357
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Calliphora vicina (urban bluebottle blowfly)
  ORGANISM  Calliphora vicina
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Oestroidea; Calliphoridae; Calliphorinae; Calliphora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_088784) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_958450345.1-RS_2024_05
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 05/22/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..511
                     /organism="Calliphora vicina"
                     /mol_type="mRNA"
                     /db_xref="taxon:7373"
                     /chromosome="5"
     gene            1..511
                     /gene="LOC135961545"
                     /note="uncharacterized LOC135961545; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:135961545"
     CDS             1..438
                     /gene="LOC135961545"
                     /codon_start=1
                     /product="uncharacterized protein LOC135961545"
                     /protein_id="XP_065369121.1"
                     /db_xref="GeneID:135961545"
                     /translation="
MKVYISLLMLVLALFVPLNKAVLNDVHDAIGWSNVDLKNFQYFKNLPSQDPKRAAQANLFLEHFQKKKAVLDYFENLFLGNSPFTQESEIPFNPHFGRAWRPYYVRKFGWKGERLIDALGKGYPIKQLKHFGAIPKDYGSKYYPS"
     polyA_site      511
                     /gene="LOC135961545"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
atgaaggtgtatatttctttattgatgcttgttttagcattatttgtcccacttaataaagcggtattaaacgatgttcacgatgctattggatggtcaaatgtggatttgaaaaatttccaatattttaaaaacttgccatcgcaagacccaaaaagagcagcacaagccaatctcttcttggaacattttcaaaagaaaaaagcagttttagattatttcgaaaatttatttttgggcaattcaccattcacacaagagagtgaaattccatttaatcctcactttggtcgagcgtggcgtccttattatgtacgaaagtttggttggaaaggagaacgattaatcgatgctttgggcaaagggtaccccattaaacaattgaagcattttggagctatacctaaggactacggttccaagtattatcctagctaattatttcatataccatttagtcatcacatatttataaatatttaaaataaactatttattaaacgaaacaaaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]