2025-02-02 22:04:06, GGRNA.v2 : RefSeq release 227 (Nov, 2024)
LOCUS XM_049592729 1744 bp mRNA linear VRT 23-JUL-2022 DEFINITION PREDICTED: Epinephelus fuscoguttatus cysteine-rich and transmembrane domain-containing protein 1-like (LOC125898785), mRNA. ACCESSION XM_049592729 VERSION XM_049592729.1 DBLINK BioProject: PRJNA859906 KEYWORDS RefSeq. SOURCE Epinephelus fuscoguttatus (brown-marbled grouper) ORGANISM Epinephelus fuscoguttatus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Serranoidei; Serranidae; Epinephelinae; Epinephelini; Epinephelus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_064763) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: Epinephelus fuscoguttatus Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1744 /organism="Epinephelus fuscoguttatus" /mol_type="mRNA" /db_xref="taxon:293821" /geo_loc_name="China" /collection_date="2018-12" /linkage_group="LG12" /note="scaffold1" gene 1..1744 /gene="LOC125898785" /note="cysteine-rich and transmembrane domain-containing protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:125898785" CDS 237..635 /gene="LOC125898785" /codon_start=1 /product="cysteine-rich and transmembrane domain-containing protein 1-like" /protein_id="XP_049448686.1" /db_xref="GeneID:125898785" /translation="
MSNDNPPPYVPPVPGGPSAPGFSSAYSSQPATFPGSPYQTFPQTYTGGGDLSYYQGPAGPQGPYLTQPGYQGYQSGPWEGPKMYGEQPKHTVFVVDQNYDDGGADGAESCLAGCSAALCCCCLWDMLTQNFC"
ORIGIN
aaaaagataaacagaggagagacagagagagactctgacgtcaccctgtcctcgtgccgctgccggctgttgcctcgcgcacactcatccattaatccatcggtcaacacgtcggtcaactggagcgacggcaacagagaaagttcatgttgtgacatttgacgcttcgtcctgagctgagagtccatccatccatccatctgtccatccgtccatccagccgtccatccgtccccatgagtaatgataaccctcctccgtacgtccctcccgtccccggtggaccttcagctcccggcttctcttcagcttacagctctcagcctgcgacctttcctggctcaccgtaccagaccttccctcagacctacacaggtggaggagacctctcctattaccaaggaccggctggaccccaggggccatacctgactcagcctgggtaccaggggtaccagagcggcccctgggagggccctaaaatgtacggagagcagccaaaacacacagtgttcgtggtcgatcaaaactatgacgacggcggcgccgacggagccgaatcatgtctggcaggatgttcagctgctctgtgctgctgctgcctctgggacatgttgacccaaaacttctgctgacctctgaccttcaccaccactgagcctcttctttcccatcatgcaccagggccaccatgatgacaccaacctttgaccttttgaccttcattattttatcctgttagacatttgtgtcaagttcggtcagaattagtgaatgaattcttcagttatggacaaaaacacgtttgtgaggtcacagtgaccttggcttgtgtccaatctgacgtttgcgccaaattgaagagaaatcccatcaaagccgtcttgagtcacgggattcagaagaatgagacagacgtaaaggcacagtgacctttgaccttcaaattctaatcagctcattgttaagtccaagtggacatttgtgccaaatttgaagaaattcccctgaggcattcttcagacatcgtgttgacaaggatgagtcagacgaggtcacactgacctttttaccactaaagtctaatcagttcatcgttcagtccaagtggacgttcatgccaaatttgaaaaaaaaaaacccaaaaaccttgaggtgttctcgagaggtcatgttagcgagaatgaaatggacgaggtcacggtgacctttaaagagataatcaccaaagtctaatcagttcatcgtggagccccagtgacagtttgtgccaaattaaaaaaaaatccctcgaggtttctgagatgtcgtgttcacatgttctcaagaatgagatggacaaagttacagtgacctttgaccttcaaaatctaatcagttcatcgttggctcaaagtggacgtttgtgccaaatttgaagaatttctcccgggatgttgttgacatatgatgttaaagagaacaggacagcgttcttacatagcggcggtggcggctcagagtctcactgacattcatgataaacgttccagtgtttgagtcacagacgccgtcagtttcactaatgtgtttctctgttgtgtgtttttccccgacctcctgatgatgtcacacccctctgccaatgatgtgcctgcacatggcgggtcctgatctcagaccctgatgacatcataaaactattttaaatgaatcattaaatctgtttgaatttaggctaaaaacttgtttataagtgtttaca
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DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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