LOCUS       XM_035464866            3108 bp    mRNA    linear   PLN 04-AUG-2020
DEFINITION  Geosmithia morbida PAZ domain (GMORB2_2890), partial mRNA.
ACCESSION   XM_035464866
VERSION     XM_035464866.1
DBLINK      BioProject: PRJNA645152
            BioSample: SAMN13870095
KEYWORDS    RefSeq.
SOURCE      Geosmithia morbida
  ORGANISM  Geosmithia morbida
            Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
            Sordariomycetes; Hypocreomycetidae; Hypocreales; Bionectriaceae;
            Geosmithia.
REFERENCE   1  (bases 1 to 3108)
  AUTHORS   Onufrak,A., Murdoch,R.W., Gazis,R., Huff,M., Staton,M.,
            Klingeman,W. and Hadziabdic,D.
  TITLE     Site-based positive gene gene selection in Geosmithia morbida
            across the United States reveals a broad range of putative
            effectors and factors for local host and environmental adapation
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3108)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (04-AUG-2020) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 3108)
  AUTHORS   Murdoch,R.W., Onufrak,A., Gazis,R., Huff,M., Staton,M.,
            Klingeman,W. and Hadziabdic,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-MAR-2020) Center for Environmental Biotechnology,
            University of Tennessee Knoxville, Ctr for Env Biotech, 1416 Circle
            Drive, Knoxville, TN 37996, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NW_023336202).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..3108
                     /organism="Geosmithia morbida"
                     /mol_type="mRNA"
                     /isolate="1262"
                     /isolation_source="California, USA"
                     /host="Juglans californica"
                     /db_xref="taxon:1094350"
                     /chromosome="Unknown"
                     /country="USA: Southwestern California"
                     /collection_date="Jan-2015"
     gene            <1..>3108
                     /locus_tag="GMORB2_2890"
                     /note="snap_masked-scaffold_15-processed-gene-0.411-mRNA-
                     1"
                     /db_xref="GeneID:55969118"
     CDS             1..3108
                     /locus_tag="GMORB2_2890"
                     /inference="protein motif:EggNOG:03NBJ"
                     /codon_start=1
                     /product="PAZ domain"
                     /protein_id="XP_035319104.1"
                     /db_xref="GeneID:55969118"
                     /translation="

MEVEDVAAAAADAEVEPRFEVVKVVEVADAEEEDTKAAECLLHKTIAGADGVTKYSRPPGGVPVPDRTVTKIEDGLKTSMDMTKLSLKDKERLDMPTRPVYATGGRAVVLWANYVALEAPPKLTLHRYDISVTPEVTGKKLTQVVRLLLEVPDLAALRDDVACDFKATLVSRRELPGPATDVTVRYRGEDEETARESAPEYRVRLRRYPNALTVSDLKAHLTSADLSAVYDDKLPMIQALNIFLNHYAKSSGNLATIGASKVFAMGSQSDTFDLGGCLTAVRGFFASVRAATGRILVNVNVSHGAFYNEGPLLQLFLTFGRQRGLFRLESFIKGLRVRTTHLKERKRSNGQVIPRVKTIFGLAGRNDGHGLAHPPRVKAMGAGAKDVEFWLDAQGQDTSTPAPAPEGADKGGPPGAAAPKKKKKAKGGTSAPAPAPAQGGGGGGRYISVYDFFSNTYGIQIANPEMPVVNVGNRANPTYLPLQVCHVLPGQAAKTKLDPGQTQSMIRFAVRRPAENVLSIVNNGLATAGLSGNTNPLLARFGISATNSLITVPGRVLNGPRVVYKQKKQAHVANGSWNMVPRDSAKLMFDTAGSLSKWSCLYIDMPSMYPSARRFNSQELGQLVSSFHGVLRDTGMAAAPPLPPQRVELSGTDDEQLDTFMQRASSSLQMLLVILPTTPIPLYDRLKQLGDVKYGVHTVCSVGSKMAKPQGQDQYLRNLALKFNLKLGGVNQSVDPGNLGVVAEGKTMVVGIDVTHPSPGSASHAPSIAGMVASIDARLGQWPGVLSIQSRSRQEMVSDLGAMLKSRLALWRARNKSALPENILVYRDGVSEGQYQLVLDTEVPLLREACRQVYPAPDQSRGLPRMAVVVVGKRHHTRFYATQDADADRSGNTKPGTVVDRGVTETRIWDFFLQAHAALQGTARPAHYCVILDEIFRRRAGGAAGATAAGSNVADKLHELTQSMCYVFGRATKAVSICTPAYYADILCERARCYLKDIFDAGSVAAPSSAPGSGMGAQDDDVRIHARLKDSMFYI"

     misc_feature    490..732
                     /locus_tag="GMORB2_2890"
                     /note="N-terminal domain of argonaute; Region: ArgoN;
                     pfam16486"
                     /db_xref="CDD:435368"
     misc_feature    772..921
                     /locus_tag="GMORB2_2890"
                     /note="Argonaute linker 1 domain; Region: ArgoL1;
                     pfam08699"
                     /db_xref="CDD:430160"
     misc_feature    925..1464
                     /locus_tag="GMORB2_2890"
                     /note="PAZ domain, argonaute_like subfamily. Argonaute is
                     part of the RNA-induced silencing complex (RISC), and is
                     an endonuclease that plays a key role in the RNA
                     interference pathway. The PAZ domain has been named after
                     the proteins Piwi,Argonaut, and Zwille; Region:
                     PAZ_argonaute_like; cd02846"
                     /db_xref="CDD:239212"
     misc_feature    order(1069..1071,1165..1167,1345..1347,1357..1359,
                     1411..1413,1432..1434,1438..1440)
                     /locus_tag="GMORB2_2890"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]; other site"
                     /db_xref="CDD:239212"
     misc_feature    1606..2985
                     /locus_tag="GMORB2_2890"
                     /note="PIWI domain, Argonaute-like subfamily. Argonaute is
                     the central component of the RNA-induced silencing complex
                     (RISC) and related complexes. The PIWI domain is the
                     C-terminal portion of Argonaute and consists of two
                     subdomains, one of which provides the...; Region:
                     Piwi_ago-like; cd04657"
                     /db_xref="CDD:240015"
     misc_feature    order(2047..2049,2059..2061,2095..2106,2113..2115,
                     2143..2145,2152..2154,2164..2166,2176..2178)
                     /locus_tag="GMORB2_2890"
                     /note="5' RNA guide strand anchoring site [active]"
                     /db_xref="CDD:240015"
     misc_feature    order(2257..2259,2263..2265,2482..2484,2953..2955)
                     /locus_tag="GMORB2_2890"
                     /note="active site"
                     /db_xref="CDD:240015"
ORIGIN      

atggaggtggaggacgtggcggcggcggcggcggacgcggaggtggagccccgtttcgaggtggtcaaggtggtcgaggtggcggacgcggaggaggaggataccaaggcagcggagtgcctactgcacaagacgattgcgggtgctgatggggttaccaaatattcaagaccacccggaggagttcccgtgccggacaggacggtgaccaagatcgaggatggcctcaagacatcgatggacatgactaagctgagcctcaaggataaggagaggctggacatgccgacgcggccggtgtacgcgaccggcgggcgggccgtggtgctgtgggccaactacgttgctcttgaggcgcctccgaagctgacgctgcaccggtacgacatctcggtgacgcccgaggtgacgggcaagaagctgacgcaggtggtccgtctgctcctggaggtcccggatctggcggcgctgagggacgacgtggcctgcgacttcaaggcgacgctagtgtcccggcgggagctgcccggcccggccacggacgtgacggtccggtaccgcggcgaggacgaggagacggctcgcgagagcgcgcccgagtaccgggtgcggctccggcggtaccccaacgcgctgacggtgtcggacctgaaggcccacctgacgtcggcggacctgtcggccgtgtacgacgacaagctgcccatgatccaggcgctcaacatcttcctaaaccactacgccaagtcgagcggcaacctggccaccatcggcgcctccaaggtcttcgccatgggcagccagtccgacaccttcgacctgggcggctgcctgaccgccgtgaggggcttcttcgccagcgtgcgcgccgccaccggccgcatcctcgtcaacgtcaacgtcagccacggcgccttctacaacgaggggcccctcctccagctcttcctgacattcggtcgccagcggggcctgttcaggctcgagtccttcatcaagggcctgcgcgtcaggactacccacctcaaggagcgcaagaggtccaacggccaggtcataccccgcgtcaagaccatcttcggcctggccggccggaatgacggccacggcctcgcccatccgcccagagtcaaggccatgggcgccggcgccaaggacgtcgagttctggctggacgctcaaggccaggatacctccactcctgcccctgctcctgaaggtgccgataagggaggtccgccgggggcagcggcgccgaagaagaagaagaaggccaagggaggcacatctgcgcctgcgcccgcacccgctcagggtggtggtggtggtggccggtatatttccgtctacgatttcttttccaacacctacggcatacagatcgccaacccagagatgcccgtcgtcaacgttggaaacagggcgaacccgacctatctccccttgcaggtgtgtcatgtgcttccgggccaggcggccaagacgaagctcgatccgggacagacgcagagcatgatccgcttcgctgttcggcgaccggcggagaatgtgttgtcgattgtgaacaacggcctggccacggctggcttgtctggcaacacgaatccactacttgccaggtttggaatctcggcgacgaacagcctgatcacggtgcccggccgggtgctcaacggaccccgcgtcgtgtacaagcagaagaagcaagcgcatgtggccaacggcagctggaacatggtgccgcgcgactcggccaagctcatgttcgacacggcgggcagcctgagcaagtggtcgtgcctgtatattgatatgccgagcatgtacccgagcgcgcggcggttcaactcgcaggagctagggcagctggtcagcagcttccacggcgtgctgcgggacacgggtatggcggcggcgccgccgctgccgccgcagcgcgtggagctcagcggcacggacgacgagcagctggacacctttatgcagcgggcgtcgtcgagcctgcagatgctgctggtgatcctgccgacgacgccgattccgctgtacgaccggctcaagcagctgggcgacgtcaagtacggcgtgcacacggtgtgcagcgtgggcagcaagatggccaagccgcagggccaggaccagtacctgcgcaacctggcgctcaagttcaacctcaagctcggcggcgtcaaccagtcggtcgacccgggcaacctcggcgtcgtggccgagggcaagaccatggtggtgggcatcgacgtgacgcacccgtcgcccgggtcggcgtcgcacgcccccagcatcgcgggcatggtggccagcatcgacgccaggctgggccagtggcccggcgtgctgagcatccagtcgcgcagccgccaggagatggtgtcggacctgggtgccatgctcaagtcgcgcctcgccctctggcgcgccaggaacaagtccgccctgcccgagaacatcctcgtataccgcgacggcgtctcggagggccagtaccagctcgtcctggacacggaggtgcccctcctccgcgaggcctgcaggcaggtctaccccgccccggaccagtcgaggggcctgccgcgcatggccgtcgtcgtcgtcggcaagcgccaccacacgcgcttctacgccacgcaggacgccgacgccgaccgctccgggaacaccaagccgggcaccgtcgtcgacagaggcgtgaccgagacccgcatctgggacttcttcctccaggcccacgccgccctccaaggcacggccaggccggcgcactactgcgtcatcctcgacgagatcttccgccgccgcgccggcggcgcagctggtgctaccgctgccggtagcaacgtcgccgacaagctgcacgagctgacccagagcatgtgctacgtctttggtcgcgccacaaaggccgtcagcatctgcacccccgcttactatgctgacatcctgtgtgagagggcgaggtgctatctcaaggatatctttgatgcgggctcggttgccgcgccgtcatcggctcctggcagtggcatgggtgcgcaggatgacgatgtccgtatccatgcgcgactcaaggatagtatgttttatatatga

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