LOCUS       XM_031940259            5429 bp    mRNA    linear   MAM 31-DEC-2019
DEFINITION  PREDICTED: Sarcophilus harrisii testis and ovary specific PAZ
            domain containing 1 (TOPAZ1), mRNA.
ACCESSION   XM_031940259
VERSION     XM_031940259.1
DBLINK      BioProject: PRJNA596784
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Sarcophilus harrisii (Tasmanian devil)
  ORGANISM  Sarcophilus harrisii
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_045430.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Sarcophilus harrisii Annotation
                                           Release 103
            Annotation Version          :: 103
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.3
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 4% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..5429
                     /organism="Sarcophilus harrisii"
                     /mol_type="mRNA"
                     /db_xref="taxon:9305"
                     /chromosome="5"
                     /cell_line="91H"
     gene            1..5429
                     /gene="TOPAZ1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 ESTs, 5 Proteins, and 95%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 5 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:100916486"
     CDS             1..5337
                     /gene="TOPAZ1"
                     /codon_start=1
                     /product="protein TOPAZ1"
                     /protein_id="XP_031796119.1"
                     /db_xref="GeneID:100916486"
                     /translation="

MPRLRSRGSGPARPGDGDDGGSEEAEREWASGRRLCTRAAALSAGPCPESASARRDRRRRRRRRRARETAAAAAQAEEEEAPRRKRGRRPGVGEARPASERRPQPPGRGLSRDRSRGLRGAGPCAAGDEASGEQSLSDGSGEERKQRKRRRRSRSLGPPWAPERPPVPGQEEPEPKDRAKKKTKEDLSGKDELSPATDLNLLCDYSMKESLISSESFQTMESSAFKSMTLMQTLGKEDLVQCNKRKIRIAKPKGLETFSPKVAENRDVQNTLAEFQDGLYRESSNYSHNSLSPTVEMGPVIKGDSNCQPFLKDCSDGRSPAYKSGEHVHVAEMASKIKKENVEKSDVNGIPHLLLKEETAGAKKSLLEGNKEGLHQNRNNGTFSCFQNTKNKHSKEVKRGVGRKPRKRMRLSEKMDETVPEINFPNVDNKSDELLLQAKQMFTENKDTLDFKTNSVVFRKGSSLMDNSLSSQEITEEKNYKKMSIRHHANDTFEKTFETYGRKERNKTVPEPCDHKSTKSDEHLKLVKNPIVKLSRDIFDISDYHCVEKRASEDFKSETEELKLSCRRAIPMTGKRIWPYYSCARTSVWCHKKGILIESNAFPSAPQESLCEDNSDRLLLSNELLVDNAQLMLQSFVTEAKKTPSSKEKGDVKGFLSSVTALTSPLMDIEEHVNSNNKKGKSEDLSRIESEVISNGSENTHSTNVTLHLAVNPRKDKGISAKLNLSSSQDNQDVNSVAGKIMSRKAALAQQTLAVPNLVKMLNTGRLTNFKIPLLKNKTEPKKEVNVKTEKEAYSPLELLDNFSTTEIRQNRMKEIGSTVNLNQQSLCIPAGVPLMQVNTDEICSKNSSTFSQSFVKQAKTNSPDLLSEAVLETIVPTYEKSDFSSDSGYIKRSPLCSPCREPHLFDSFISSGEVGEEASRKSFAEIKVAFPDILQAYEDDVLVIDVIQDDPDLFGIEGEPLFTSDDAFKNQEPNSAEDFQEIDSKPMKLQEKRDPSNDSGYACQHVKREFPAQDHGSLTSEIICSSTSLITVNESKHDSPILNNSLGKITNEEENPAELNEHKKGLDMEEKCKFSGNVTIKEEKENIFELEKSKDSKYAEILVGERQLTSLCPTTPCLPIPSLNLKAHQDGTILKPWMNDFRFSGKYPLLMLQNPENCEIFKREKNAGMFQKPLGLMMLPHGYCKFHFNTLRGCERSLCKFTHIPEQADEKVCMEILKKYINIGEVCLLQRAVNLFMEYYRKFPPGVHFESQVLNDLLISLLKHCLLKEVFQVVNISIMVKMLPALKVLIKVFEHVASMNLRNAVPTLIDIFCKLVEAGMILDSEHFNYLIKLLYQVQASKQEINAVLEMKSRLRVRQFKKNWLSDLNSAITEIEHCKEKGDWTSLGNLYINVKMGCEKFADLQRFSAFIAEALTKDYKEERQGIPFCEFADAVCKDPQNSEIDKTLLGRIGISAVYFYHKLLQWSKGRKVLDKLHELQIHFTNLKGLTGPEKLASRCQIVNVAAEIFLKSGSMDGAIWVLRESEWIINTPLWPCDRMDVLNRHNLLCTIAHEILAKSLYRQTFEVLQNLPGFQNSQETVEVSQYSLLFNKLLDACIESNSLGVSSSVAEFMFSKNIPIDFSFLRRLITALGRSCLWPKARAHYKSALSLGCYPPLEGNLYRKLLLIPSYLSEIEMLLAIEIFLVSNASSIQSPGASSQTLQIVLKRCEEDKGRSKDDYRTAVERLIMAARISDPKLFIKHMTVNITMEQVYSLEHCSALKWLKENMKWAGKVWLFQ"

     misc_feature    4123..4650
                     /gene="TOPAZ1"
                     /note="Putative aspartate racemase; Region:
                     Asp_Glu_race_2; pfam14669"
                     /db_xref="CDD:434113"
ORIGIN      

atgccgcggttgcggtcgcggggctcggggcccgcgcggcctggcgacggcgacgacggcggcagcgaggaggcggaacgggagtgggcgtcgggccgccgcctgtgcactcgggccgcggccttgtccgcagggccctgcccggagtccgcctcagccaggcgggacaggaggaggcggcgccggcgccggcgcgcccgggagactgcggcggcggccgcccaagcggaggaggaggaggcgccgcggcggaagcgcggccgcaggcccggcgtcggggaggcccggccggctagcgagcggcggccgcagcctccggggcgcgggctgagccgggaccgcagccggggcctgaggggagcggggccttgtgcagccggggacgaggcctcgggcgagcagagcctcagcgacgggtcgggagaggagaggaagcagcggaagcggcgcaggcggagccggagcctgggccccccctgggcccccgagcggccgccggtgcccgggcaggaggaaccggagcccaaggacagagcaaagaaaaaaactaaagaagatttaagtggaaaagatgagctttcgccagcaactgacttgaatttgctttgtgattatagcatgaaggaatcattaatcagttctgaatcttttcaaacaatggagtccagtgcatttaaaagcatgactttaatgcagactttgggcaaggaagacttagtacaatgtaataaaaggaaaattagaatcgcaaaacctaaagggttagaaaccttctctcccaaagtagctgaaaacagggatgtacagaacactttagcagagttccaagatgggctgtacagggagagttccaattattctcataacagcctgtcacctacagtagagatgggtccagtgattaaaggcgacagtaattgccaaccctttttaaaggattgtagtgatggaagaagtcctgcttataaaagtggtgagcatgtgcatgtggcagaaatggcctcaaagataaagaaagagaatgtggagaagagtgatgtgaatggtatccctcatcttctgttaaaggaagaaactgcaggagcaaaaaaatcattgcttgaaggaaacaaagaaggattacaccagaacagaaataatggcaccttttcttgctttcaaaatacaaaaaacaagcactccaaagaagttaaaagaggcgttgggagaaaacccaggaaaaggatgagattatctgaaaaaatggatgaaacagttcctgagataaatttcccaaatgtggataacaaatcagatgagttgttgttacaagcaaagcaaatgttcacagaaaacaaagatactttagattttaaaacaaattcagttgttttcagaaagggttcctctttaatggataattctcttagttctcaggaaatcactgaagagaagaattacaagaaaatgagcataagacaccatgcaaatgatacatttgagaaaacatttgaaacctatggtagaaaagaaagaaataagactgttccagagccctgtgaccataaaagcacaaaatcagatgaacaccttaagttggtgaaaaaccccatcgtgaaactctctcgagatatatttgacatttctgattatcattgtgttgaaaagagagcttcagaagactttaaaagtgaaactgaagaattaaaactaagttgtagaagagcaattccaatgactggtaaaagaatttggccttattattcatgtgctaggacatctgtttggtgtcataaaaagggtatcttaattgaatcaaatgcctttccttctgcacctcaagaaagtctatgtgaagataattctgataggctgcttctaagtaatgaactcttagttgataatgcccaattaatgttacagagttttgttacagaagcaaagaaaacaccttcaagtaaagaaaaaggggacgtaaaaggttttttgtcttctgttactgcgctaacatctcctttaatggatatagaggagcatgtaaacagcaataacaaaaaagggaagtcggaagatctgagtagaattgaatcagaggtgatttctaatggcagtgaaaatacccattcaactaatgtgaccctacatttggcggtgaatccaagaaaagataaaggaatttcagcaaaacttaatctgtcctcttctcaagataatcaggatgtaaacagtgttgcaggcaaaattatgagtcggaaagcagctcttgcccaacagacacttgcagtgccaaatttagtgaaaatgctaaatactgggcggctgacaaactttaaaatccctttactcaagaataaaacagaacccaaaaaggaggtaaatgttaagacagagaaggaagcctatagtcccctggagcttcttgacaatttctctacaacagaaattagacagaataggatgaaagaaattggcagtacagtaaatttaaaccagcagtctctgtgcatcccagctggtgtcccactaatgcaagtaaatactgatgagatctgcagtaaaaactctagtactttttctcagagctttgtgaaacaagctaaaacgaattcacctgacttgctttctgaggctgtcctagaaactatagttcctacctatgagaagagtgatttttcttctgattctggttatataaagagaagccctttatgctcaccttgcagggaacctcacttgtttgattcttttatttcatctggagaagttggtgaggaagcatccagaaaaagctttgcagaaattaaagttgcatttccagatatacttcaagcttatgaagatgatgtccttgtaattgatgtaattcaagatgatccagacctctttggaattgaaggggaacctttatttacgtcagatgatgcttttaaaaaccaagaacctaatagtgcggaagacttccaagaaattgattcaaagcctatgaaactgcaagagaaaagagacccaagcaatgactctgggtatgcctgtcagcatgtaaagagagaatttcctgcacaggaccatggatcgttgacatcagaaatcatttgttccagcacttcattaataactgtaaatgagagcaagcatgattctccgattctgaataattctttgggaaagatcactaatgaggaggaaaacccagcagagttaaatgagcataaaaaggggctggacatggaggaaaagtgtaaattttcaggtaatgtgacaataaaagaagaaaaagaaaacatttttgaacttgaaaaaagcaaagattctaaatatgcggagattcttgtgggtgagcgccagttaacatccctgtgtccaacaaccccatgtctgccaataccttctttgaatctcaaagctcatcaggatggcacgatcctgaaaccctggatgaatgatttcagattttcaggaaaatatcctctccttatgttacagaatcctgaaaattgtgagatatttaaaagggaaaaaaatgcagggatgttccagaagcccctggggttgatgatgttaccccatggatactgcaaatttcattttaatacattacgtggctgtgagcgatcactgtgtaaatttactcacattcctgaacaagcagatgaaaaggtttgcatggaaatacttaagaaatacataaatattggtgaggtgtgtctgcttcaacgtgcagtaaacctgtttatggagtactacagaaagtttcctcctggggtacattttgaatcacaagtgctaaatgaccttctgatttctttactcaaacactgtttattgaaagaagtgtttcaggtagtgaacatcagcataatggtcaaaatgctgcctgctctaaaagtattaataaaagtatttgagcatgtggcatctatgaacttaaggaatgctgtaccaactctaattgatatcttttgcaagcttgtagaagctgggatgattcttgattctgaacattttaactatcttattaagctcttataccaagtacaggcttccaaacaagaaataaatgctgttttagaaatgaaatccaggttacgggtgagacagtttaaaaagaattggctttctgacttaaattcagcaataactgaaatagagcattgtaaagaaaaaggtgactggaccagtttgggaaatttgtacattaatgtaaaaatgggctgtgaaaaatttgcagatcttcagagattttcagctttcattgctgaagcattaaccaaagattacaaagaagaaagacaaggaattcctttttgtgaatttgctgatgcagtctgcaaagatccccaaaacagtgaaattgataaaactttattgggaagaatcggaatcagtgcagtctacttttatcacaaacttctacagtggtcaaagggaaggaaggtacttgacaaactgcatgaactgcaaatccatttcacaaatttaaaaggacttactggccctgagaagttagcatcacggtgccagattgttaatgtggcagcagaaatttttcttaaaagtgggagtatggatggtgccatttgggtattgagggagtcagaatggataataaatacaccactatggccctgtgataggatggatgttctcaacagacataacttgctctgtacaattgcacatgagatcttggccaagagcctttaccgacaaacatttgaagttctccagaatttacccggtttccaaaattctcaagaaactgtggaagtctcgcagtatagccttctttttaacaagcttctagatgcttgcatagagagcaatagtctgggtgtgtcatcttccgttgcagaattcatgttttcaaagaacatccctattgatttttcttttctcagaaggttaattactgctttagggagaagctgtttatggccaaaagccagagctcattacaaaagtgctctgtcactgggctgttatccaccattggaaggaaatttgtaccgaaaactcctgctaattccttcctacctgtctgagattgaaatgcttttagctattgaaatttttctagtatctaatgctagtagtattcagagtcctggtgcttcttcacagacactacaaatagtactgaaaaggtgtgaagaagacaaaggccggagtaaagatgactatagaacagcagtggaaagattgatcatggctgctcggatatcggatccaaagcttttcattaagcacatgacagtaaatattactatggagcaagtttatagtttggaacattgttctgccctgaaatggttgaaagagaatatgaaatgggctgggaaagtttggctttttcagtaagtattaggttataaagacttttttttttcaagttccagcaatcattgttgaaaatgaatggtaataaaggcagttctcactgtgtccggact

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