LOCUS       XM_021213200            2596 bp    mRNA    linear   ROD 18-JUN-2019
DEFINITION  PREDICTED: Mus pahari distal-less homeobox 3 (Dlx3), mRNA.
ACCESSION   XM_021213200
VERSION     XM_021213200.1
DBLINK      BioProject: PRJNA387191
KEYWORDS    RefSeq.
SOURCE      Mus pahari (shrew mouse)
  ORGANISM  Mus pahari
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Coelomys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_034603.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Mus pahari Annotation Release 101
            Annotation Version          :: 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.2
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2596
                     /organism="Mus pahari"
                     /mol_type="mRNA"
                     /db_xref="taxon:10093"
                     /chromosome="14"
                     /sex="female"
                     /tissue_type="tail"
     gene            1..2596
                     /gene="Dlx3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 mRNAs, 7 Proteins, and 77%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:110332143"
     CDS             205..1068
                     /gene="Dlx3"
                     /codon_start=1
                     /product="homeobox protein DLX-3"
                     /protein_id="XP_021068859.1"
                     /db_xref="GeneID:110332143"
                     /translation="

MSGSFDRKLSSILTDISSSLSCHAGSKDSPTLPESTVTDLGYYSAPQHDYYSGQPYGQTVNPYTYHHQFNLNGLAGTGAYSPKSEYTYGGSYRQYGAYREQPLPAQDPVSVKEEPEAEVRMVNGKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKKLYKNGEVPLEHSPNNSDSMACNSPPSPALWDTSSHSTPAPARNPLPPPLPYSASPNYLDDPTNSWYHTQNLSGPHLQQQPPQPATLHHASPGPPPNPGAVY"

     misc_feature    283..525
                     /gene="Dlx3"
                     /note="Homeobox protein distal-less-like N terminal;
                     Region: DLL_N; pfam12413"
                     /db_xref="CDD:432536"
     misc_feature    <529..876
                     /gene="Dlx3"
                     /note="Homeodomain-containing transcription factor
                     [Transcription]; Region: COG5576"
                     /db_xref="CDD:227863"
     misc_feature    order(592..606,610..612,661..663,679..681,718..720,
                     724..729,736..741,745..753,757..762)
                     /gene="Dlx3"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     misc_feature    598..759
                     /gene="Dlx3"
                     /note="Homeobox domain; Region: Homeobox; pfam00046"
                     /db_xref="CDD:425441"
     misc_feature    order(598..600,607..609,727..729,736..741,748..750)
                     /gene="Dlx3"
                     /note="specific DNA base contacts [nucleotide binding];
                     other site"
                     /db_xref="CDD:238039"
ORIGIN      

agcatttgactgtggcttgggacgcggagagaggcacgcagcgactgaccgacggccggcgatggtctaagcgcccctcggccaccccctcccccagacgcgaccgcgtcctgccctcgccctctggacacacaccccacctgggctcctccgcccgttcggtgctcctcggaggaggcccggggtgttgcggcgctcgccagcatgagcggctccttcgatcgcaagctcagcagcatcctcaccgacatctccagctcgcttagctgccatgcgggctccaaggactcgcccaccctgcccgagtctacggttactgacctgggctattacagcgctcctcaacatgactactactcgggccagccctacggccagacggtgaacccctacacctaccaccaccagttcaatctcaatgggctcgcaggcaccggcgcttactcgcccaagtcggaatatacctacgggggatcctataggcaatacggagcgtaccgcgagcagcctttgcctgcccaggacccagtgtcggtgaaagaggagccagaagccgaggtacgcatggtgaacggcaagcccaagaaggtccgaaagccgcgaacgatctactccagctatcagctggctgccctgcagcgccgtttccagaaagcccagtatctggccttgccggagcgcgccgagctagctgcacagctgggcctcacacaaacacaggtgaaaatctggttccagaaccgccgctccaagttcaaaaagctctataagaatggggaggtgcctctggaacacagtcccaacaatagtgactccatggcctgcaactcaccgccgtcaccggcactctgggacacatcttcccattccacgccagcccctgcccgcaatccgctgcccccgccgctcccatacagtgcctcccccaactacctggacgaccccaccaactcctggtaccacacacagaacctcagtggaccccacttacagcaacaacctcctcagccggctaccctgcaccatgcctcccctgggcccccgcctaaccctggggctgtgtactgagtacccacctggcctgcgcccctccacgaaggaccccctccaggaacaggcagaaggtgccctgtcctagtgacactcaggaatcattgaggggcacaggggaaagactcccttccttctcctttgtcccttctcccaggggcccaacaacctccagatgacaaatgcatggaccgaggatgcccccccaaacaatctccctccccttgcttagactggggtgccctccagacagcgaggagttccactccagtggggacagcacatgctctctgctccaggaaccaggattgtctctagatggttcatcaccttccaacttttcaaacacagtagagatctccaaaatgggagagccagagtgtttgcaggtccacctgtgctggggcaccaggcgccaccggattccagcatggccagacctaaagcaccaggggcaactacacatccttgagccattctttaaagacgttggacattacatcatggctgatcctcaagatgggggcagggggctgacctagtccccactgttctccagccctcattaggatttgagggtcaaaccgaagaaaactcccccaaattagggaacctttgatatccagggcttccaagggaagaattaaaggagccatccctccgccccttccctggggaaaaggactgcccatgtccttttccaaggacctgtttctccttccatgtacaggactttgcacaagtcaggttttaaaagctgttgaaacctaggacaacaacgggcattgttaacagttaggaccaaatccactcctctctgggtgggcagctctgctctgccctgaccctgcttacccctttggtttttgttttgtttgtttttttttttttttctcccagtaagtttgcagtcttgggggatggggtcaaaccctaactctctacagagatataccaggcaagacaacccccccccaacactcccttcgtggcagctttggaaacaggttgtccattctgctgcaggattcaagtgaggatccaggaaacaagaggagacccagaactcagtgccttaggggtaaggctggcggcttggaccctggtaccagtgtctctccctggcccaggcattcccccaaagctaactttcttctgccccctgatgtggtaaaacatcgaagaaaggagaggtgaaagactgtagttatatatatatatagtatggttttttttgttgtttctttctttttttttttttttaaagagcaaccaagagaaacagtcccctcccttgtggtttcctatttatgtgaccctgttcctcctggaccaatctccctgtgtgttgcaagccgaaagagggatgtgggctcctgctggatttgggtttcctgggaagtgaaggagtaaggagagacagccgctgtgggtctctgagtcccaccccaaagggacaggaatgaagccagctcccacccctccccagccttctcatttctgctttcttactggaacagtctttatatataatgttaataaaaat

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