LOCUS       XM_021201863            3913 bp    mRNA    linear   ROD 18-JUN-2019
DEFINITION  PREDICTED: Mus pahari NRDE-2, necessary for RNA interference,
            domain containing (Nrde2), transcript variant X1, mRNA.
ACCESSION   XM_021201863
VERSION     XM_021201863.2
DBLINK      BioProject: PRJNA387191
KEYWORDS    RefSeq.
SOURCE      Mus pahari (shrew mouse)
  ORGANISM  Mus pahari
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Coelomys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_034596.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jun 18, 2019 this sequence version replaced XM_021201863.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Mus pahari Annotation Release 101
            Annotation Version          :: 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.2
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3913
                     /organism="Mus pahari"
                     /mol_type="mRNA"
                     /db_xref="taxon:10093"
                     /chromosome="7"
                     /sex="female"
                     /tissue_type="tail"
     gene            1..3913
                     /gene="Nrde2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 5 mRNAs, 4 Proteins, and 97%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 3 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:110324358"
     CDS             243..3752
                     /gene="Nrde2"
                     /codon_start=1
                     /product="protein NRDE2 homolog isoform X1"
                     /protein_id="XP_021057522.1"
                     /db_xref="GeneID:110324358"
                     /translation="

MALFPAFADVSEASGDGASRKELDWLSNPSFRVGNLTSLSRQTEEVTALASEGSPPPRYLFNRSPLKSEPPGESATSEKLTQISRKKKKEKKKKRKHQHPKKSKRRREQSSSSGSESDTEAGKDRASRSIRDGQKEAEKPCQGSNAAAAAAGQRSIWLEDIHDLTDVFRTDNKPDPANWEYKSLYRGDIARYKRKGDSCLGINPKKQCISWEGASATKKHSHRHLERYFTKKNVGLMRMEGIAVCSNPEPPSSEPVTFIPVKDSAEAATPVTSWLNPLGIYDQSTTQWLHGQGPAEQDSKQPDSQQDRECAALKARVEEFNRRVRENPRDTQLWMAFVDFQDEVMRSPGIYALGEGEQEKHRKSLKLLLEKKLAVLERAIESNPGSVELKLAKLQLCSEFWEPSALAKEWQKLLFLHPNNTSLWQRYLSFCQSQFGTFSVSKLHSLYGKCLSTLSAVKDGSMLSHPVLPGTEEAMFGLFLQQCHFLRQAGHSEKVISLFQAMVDFTFFKPDSVKELPTKVQVEFFEPFWDSGEPRVGEKGARGWRAWMHQQERGGWVLVTPDEDDEEPEEEDQEIKDKTLPRWQIWLAAERSRDQRHWRPWRPDKTKKQTEEDCEDPERQVLFDDIGQSLIRLSSPGLQFQLIEAFLQFLGVPSGFLPPASCLYLAMDESSIFENELYDEKPLTYFNPSFSGISCVGYMEQLGCPRWTKGHNREGEEFVRNVFHLVLPLFSGKQKSQLCLSWLRYEIAKVIWCLHTKKKRLKSQGKNCKKLAKNLLKEPENRNNFCLWKQYAHLEWLLGNTEDARKVFDTALSMAGSSELKDRELCELSLLYAELEMELSPDLRGATTGRAVHILTRLTESSPYGAYTGQVSSTQILKARKAYEHALQDCLGQGCASSPAPAEALDCLGSLVRCFMLFQYLTVGIDAAVQIYGQVFSKLKGSALLEGPGSEDSTSSQSLTSVLEAVTMMHTSLLRFHMNVCVYPLAPLRETLSDALKLYPGNQVLWRAYVQIQNKSHSANKTRRFFDTVTRSAKHLEPWLFAIEAEKLRKRLVESVQRVGGREVHATIPETGLTHRIRALFENAIRSDKGNQCPLLWRMYLNFLVSLGNKERSKGVFYKALQSCPWAKVLYMDAMEYFPDELQEILDVMTEKELRVRLPLEELELLLED"

     misc_feature    744..1031
                     /gene="Nrde2"
                     /note="MTR4-interacting domain (MID) found in nuclear
                     exosome regulator NRDE2 and similar proteins; Region:
                     NRDE2_MID; cd22200"
                     /db_xref="CDD:412062"
     misc_feature    order(744..767,774..779,789..794,798..800,804..848,
                     855..863,867..875,897..905,915..920,924..929,936..956,
                     981..992,1002..1031)
                     /gene="Nrde2"
                     /note="MTR4 binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:412062"
     misc_feature    1197..2195
                     /gene="Nrde2"
                     /note="necessary for RNA interference; Region: NRDE-2;
                     pfam08424"
                     /db_xref="CDD:429988"
ORIGIN      

ccagcgttcagtgaagccggagggcactaactacaaggaaacagttcttcctcgttctcatcctttcccctcctcccctctctaccctttgggtctccgcaccgccttgcccaggggttaagcctcgacgagtgcaggaagaactacatttcccagagtgcctcgcgaattcagcgtcctccaaccagagctctccagacggcgccatttctgtggcaggagtggtggtgcggcctgtgatcatggcgctgttcccggcctttgcggacgtaagtgaggcctccggtgatggggcatccaggaaagagttagattggctgagcaacccaagctttcgtgttggaaatctaacttctctgagccgacaaactgaagaggtcacagcccttgcttctgaagggtcaccaccgccaaggtacttgtttaacaggagtcctctgaagtcagagcccccaggggagagcgccactagtgagaagctcacacagatcagcaggaagaagaagaaggagaaaaagaagaaaaggaagcaccagcaccccaagaaaagcaagaggaggcgtgagcagtcgagcagcagtggctctgagtcggacacagaggctgggaaggacagggcttcccgaagcatcagggatggccagaaggaagctgagaaaccctgtcagggaagcaatgctgctgctgctgctgctggacagcgttccatttggctggaagatattcacgatctgaccgatgtcttcaggacagataacaaaccagatcctgccaactgggagtataaatctctgtatcgtggggacatagcaaggtacaagagaaagggagactcctgccttggtatcaatcctaagaaacagtgtatatcttgggaaggggcttctgcaacaaagaagcactcacacaggcacctggagcgctattttaccaagaagaatgtggggttaatgagaatggagggcattgctgtgtgtagtaaccccgagcctccctcctccgagccagtcacattcatcccagtgaaggactctgctgaggcggctactcctgttacatcatggctgaatcccctggggatttatgatcagtctaccacacagtggttacacggacagggtccagcagagcaagactcaaagcagccagactcacaacaggacagggagtgtgctgctctcaaggctagagtggaagagtttaacagaagggttcgggagaatcctcgggacacgcagctatggatggcgtttgtggatttccaggacgaggtcatgaggagtcctggcatctatgcccttggggaaggagaacaggagaagcacaggaagtccctgaagctcctcctggagaagaagctggctgtgctggagcgggccatcgagagcaacccaggcagcgtggagctgaagctcgccaagctgcagctgtgctcagagttctgggagcctagcgcgctggccaaggagtggcagaagctcctcttcctgcaccccaacaacacaagcctgtggcagcgctatctctccttttgccagagccagtttggtaccttttctgtgtccaaactccacagtctgtatggcaagtgcttgagtaccttgtctgctgttaaagatggcagcatgctatcccaccctgtgttgccgggcactgaggaggccatgtttgggctctttcttcagcagtgccattttctacggcaggctggccactcagagaaggtcatctctttgttccaggccatggttgacttcaccttcttcaagcctgacagtgtgaaagagctgcctactaaagtacaggtggagttctttgagcccttctgggacagcggagagccacgtgttggggagaagggagcccgaggctggcgggcatggatgcaccaacaggagcgcggtggctgggtgcttgtcaccccagatgaggatgacgaggagccagaagaggaagaccaggagataaaagacaagaccctgcccaggtggcagatctggctcgctgctgaacgttctcgagaccagaggcactggcgtccctggcgccctgataagaccaagaagcaaacagaggaagactgtgaggaccctgagagacaggtgctgtttgatgatattgggcaatctttgatcagactttccagcccaggtcttcagttccagctcattgaggcctttctgcagttcttgggcgtgccttctggcttccttcccccagcctcctgcctttatctggccatggatgagagcagcatctttgagaatgaactttatgatgaaaagcccttgacttacttcaacccttccttttcgggcattagctgtgttggctacatggaacagttgggttgccctcgctggaccaaaggtcacaaccgagagggtgaggagtttgtccgcaatgtcttccacctggtgctgcctttgttctcaggcaagcagaagtcccagctctgcctctcctggttacggtacgagattgcaaaggtcatttggtgtctacacactaaaaagaagcgattaaagtctcagggaaagaactgcaaaaaactagccaagaatctccttaaggagccagaaaaccgcaacaacttctgcctctggaagcagtatgcgcacctggaatggttgctgggtaacacagaggatgccagaaaagtgttcgacacagcgctcagcatggccggcagcagcgagctgaaggaccgtgaactctgcgaactcagtctgctctatgctgagctggagatggaactgtcgccggacttgagaggagccaccacaggccgagcggtccacatattaacacggctgacggagagcagtccctacggggcctacactgggcaggtctcgtccacccagattctgaaagctcggaaggcttacgagcacgcgctgcaggactgcctgggccagggctgtgcctccagcccagctcctgccgaggccttggactgcctgggtagcttggtccgatgctttatgctcttccagtatttgactgtgggcattgatgctgctgtgcagatatatggacaggtcttttccaagctgaagggctctgctctcctagaaggccctgggtcagaggacagcaccagctcccagagtttgaccagtgtccttgaggctgtcaccatgatgcacacaagcctgctgcgattccacatgaatgtttgtgtgtaccctctggctccactccgagagaccctctcagatgctttaaagctgtatccgggcaaccaggttctttggagggcttacgtacagattcagaataagtcccacagtgctaacaagaccagaaggttctttgacacagtcactaggtctgccaaacatttggagccttggctgtttgcaattgaagctgagaagctgaggaaaaggctggtggaatctgttcagagggttggcggcagggaggtccatgcaaccatccctgagactggccttacgcatcggatcagagctttgtttgaaaatgcgattcggagcgacaagggcaaccagtgccccctactatggaggatgtatctgaattttttggtttccttaggaaacaaagaaagaagcaaaggcgtgttctacaaggccctccagagctgtccttgggcaaaggtgctatacatggacgccatggagtatttcccagatgagctgcaggagatcctggacgtgatgaccgagaaggagctccgtgtgcgcctgccccttgaggagctggagctattgctggaggattagcgtgcagccaggcctgtgtcagcctgcagagcccagagctgcagctgtgcagggacttgctccactgtcctggtggggattggatgtattgatttacatattatatatgtgatctatatgtacaaactgagtcgtgccagtgataaaccttttgtggttga

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