LOCUS       XM_020655159            5456 bp    mRNA    linear   VRT 23-MAY-2019
DEFINITION  PREDICTED: Labrus bergylta protein argonaute-4 (LOC109999969),
            transcript variant X2, mRNA.
ACCESSION   XM_020655159
VERSION     XM_020655159.2
DBLINK      BioProject: PRJNA379987
KEYWORDS    RefSeq.
SOURCE      Labrus bergylta (ballan wrasse)
  ORGANISM  Labrus bergylta
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Labriformes; Labridae; Labrus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_018115034.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On May 23, 2019 this sequence version replaced XM_020655159.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Labrus bergylta Annotation Release
                                           101
            Annotation Version          :: 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.2
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5456
                     /organism="Labrus bergylta"
                     /mol_type="mRNA"
                     /db_xref="taxon:56723"
                     /chromosome="Unknown"
                     /sex="female"
                     /tissue_lib="Muscle"
     gene            1..5456
                     /gene="LOC109999969"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 13 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:109999969"
     CDS             178..2820
                     /gene="LOC109999969"
                     /codon_start=1
                     /product="protein argonaute-4 isoform X2"
                     /protein_id="XP_020510815.1"
                     /db_xref="GeneID:109999969"
                     /translation="

MEALGPGPPAPTSLFQPPRRPGLGTVGKPIRLLANHFQVQIPKIDVYHYDIDIKPEKRPRRVNREVVDTMVRHFKMQIFGDRQPGYDGKRNMYTAHPLPIGRDRVDLEVTLPGEGKDQTFKVSLQWVSVVSLQMLLEALSGHLNEVPEDSVQALDVITRHLPSMRYTPVGRSFFSPPEGYYHPLGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYRAQPVIEFMCEVLDIQNINEQTKPLTDSQRVKFTKEIRGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLENGQAMECTVAQYFKQKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLVKSNSMVGGPDPYLKEFGIVVHNDMTEVTGRVLPAPMLQYGGRVSTDTGRDCGRNKTVATPNQGVWDMRGKQFYAGIEIKVWAVACFAPQKQCREDLLKSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFKHLKMSYVGLQLIVVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINAKLGGINNVLVPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDGHPSRYCATVRVQTSRQDLSQVTPTPQEQLFSQEVIQDLTNMVRELLIQFYKSTRFKPTRIIYYRGGVSEGQMKQVAWPELIAIRKACISLEEDYRPGITYIVVQKRHHTRLFCSDKAERVGKSGNVPAGTTVDSTITHPSEFDFYLCSHAGIQGTSRPSHYHVLWDDNCFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKDHDSAEGSHVSGQSNGRDPQALAKAVQIHYDTQHTMYFA"

     misc_feature    259..648
                     /gene="LOC109999969"
                     /note="N-terminal domain of argonaute; Region: ArgoN;
                     pfam16486"
                     /db_xref="CDD:435368"
     misc_feature    679..831
                     /gene="LOC109999969"
                     /note="Argonaute linker 1 domain; Region: ArgoL1;
                     pfam08699"
                     /db_xref="CDD:430160"
     misc_feature    832..1194
                     /gene="LOC109999969"
                     /note="PAZ domain, argonaute_like subfamily. Argonaute is
                     part of the RNA-induced silencing complex (RISC), and is
                     an endonuclease that plays a key role in the RNA
                     interference pathway. The PAZ domain has been named after
                     the proteins Piwi,Argonaut, and Zwille; Region:
                     PAZ_argonaute_like; cd02846"
                     /db_xref="CDD:239212"
     misc_feature    order(988..990,1033..1035,1075..1077,1087..1089,
                     1141..1143,1162..1164,1168..1170)
                     /gene="LOC109999969"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]; other site"
                     /db_xref="CDD:239212"
     misc_feature    1333..2691
                     /gene="LOC109999969"
                     /note="PIWI domain, Argonaute-like subfamily. Argonaute is
                     the central component of the RNA-induced silencing complex
                     (RISC) and related complexes. The PIWI domain is the
                     C-terminal portion of Argonaute and consists of two
                     subdomains, one of which provides the...; Region:
                     Piwi_ago-like; cd04657"
                     /db_xref="CDD:240015"
     misc_feature    order(1777..1779,1789..1791,1825..1836,1843..1845,
                     1867..1869,1876..1878,1888..1890,1900..1902)
                     /gene="LOC109999969"
                     /note="5' RNA guide strand anchoring site [active]"
                     /db_xref="CDD:240015"
     misc_feature    order(1981..1983,1987..1989,2245..2247,2659..2661)
                     /gene="LOC109999969"
                     /note="active site"
                     /db_xref="CDD:240015"
ORIGIN      

ccagcaagcagcagtggaggctcaggtcagtcagtacagtcagcagtcatccacgcacctatctatattccccttttcttaaattagccacttttcagcttcgcgataccgcccccaatttcagcctcggtacggagccgccaggccgggacagagacggagagagaggcctcggccatggaagcgctcggacccggcccgcccgcaccaacctctctgtttcagcctccacggcgtcccggccttggcacggtggggaaacccatccggctccttgccaaccacttccaggtgcagattcccaagattgatgtctatcactatgatatcgacatcaagcctgagaaacggcctcggagggtcaacagggaggtggtggacaccatggtgcggcacttcaagatgcagatctttggagaccggcagcctggctacgacgggaagaggaacatgtacacagcacatccactgccaatcgggagggacagggtggacctggaggtgactctgcccggcgaggggaaagatcagacgtttaaggtgtccttgcagtgggtgtctgtggtcagtcttcagatgctgctggaggctctgtcaggccacctgaacgaggtccccgaggactcggttcaggctctggatgtcataacgcggcacctgccctccatgaggtatactcctgtggggcgttcatttttctcccccccagaaggctactaccatcctctgggcggaggcagggaggtgtggtttggtttccatcagtctgtccgtcctgccatgtggaacatgatgctcaacatcgatgtgtcagccacagccttctaccgtgctcagcctgtgatcgagttcatgtgcgaggtgctggatatacagaacatcaacgaacagaccaaaccactgaccgactcgcagcgtgtcaaattcacaaaggaaataagaggcttgaaagttgaggtcacacactgtggtcaaatgaagaggaagtaccgtgtgtgcaacgtaacgcgccgacctgccagccaccaaacgttccccttacagctagagaacggccaagccatggagtgcacagttgctcagtatttcaagcagaagtacaatctgcagctcaagtatccacatttaccgtgcctgcaagtagggcaggaacagaagcacacctaccttcccctggaggtctgtaacatagtcgcaggccagcgctgtatcaagaagctgacggacaaccagacatccaccatgatcaaagctacagctcgctccgcccccgacagacaggaagaaatcagcagactggtgaaaagtaacagcatggtcgggggtccggacccttacctgaaagagtttggcatcgtcgtgcacaatgacatgaccgaggtgacgggtcgtgtgctcccagcgcccatgcttcagtacgggggccgcgtgagcacagacacagggcgggactgtggcaggaataagaccgtggccacgcccaaccagggcgtgtgggacatgagagggaagcagttctacgccggcatcgagatcaaggtctgggccgtggcctgcttcgctccgcagaaacagtgcagggaggacctgctcaagagcttcaccgaccagctgcgaaagatctccaaggatgctgggatgcccattcagggccagccatgtttctgtaaatacgcccaaggagctgacagcgtggagcccatgttcaaacacctgaagatgtcttacgtgggcctgcagctgatcgtggtcatcctgcctggaaaaacacccgtctatgctgaagtgaagcgcgtgggcgacactctgctcggcatggcgacccagtgtgtgcaggtgaagaacgtagtgaagacatccccgcagaccctctccaacctgtgcctcaagatcaacgccaagctgggaggaatcaacaacgtcctggtgcctcatcagaggccctctgtgttccagcagccggtcatcttcctgggtgcagatgtcacccatcctccagcgggtgatgggaaaaagccgtccatcgcagcggtagtcggcagcatggacggccacccgagccgctactgcgccacggttcgagtccagacgtccagacaagatttgtcccaggtaacaccaaccccccaggagcagctcttcagccaggaggtgatccaagatttgaccaacatggtgcgggagcttctcatccagttctacaagtcgacgcgcttcaagcccacgcggatcatctactatcgtgggggagtgtcagagggacaaatgaagcaggtagcgtggccggagctgatagccatcaggaaggcctgtatcagcctggaggaggattacaggccgggcattacttacatcgtggttcagaaacgtcaccacacccgtctcttctgctccgacaaagccgagcgggttgggaagagcggtaatgttccagctggcaccacggtggacagcaccatcacacacccgtccgagtttgatttctacctgtgcagccatgctgggattcagggaaccagtcgtccctcccactaccacgtcctgtgggatgacaactgtttcactgccgatgaactgcagctcctcacctaccagctgtgccacacctacgtccgctgcacgcgctccgtctccatcccagcaccggcctactacgcccggctggtggctttcagagcccgctatcacctggtcgacaaagaccacgacagcgctgaaggcagccacgtgtcgggccaaagcaacggccgggaccctcaggcgctggcaaaggcagttcagatccactatgatactcagcacaccatgtacttcgcctgagctagcgagcacgtcagccagtccacccgcggattcccttttctctctgtctgtttatctcttatttgccattttctctctctctctctctcttcatcttcatcttcttctcccacctctctctctctttttgtagcctgttccttttctcttcatcactcattctacattttctgaatctgcaccaaagcggctctttggacggggggaaatctgctgcgtcttctacgtccggcaggttttttttttttgttttgtttgttttccaggaacaatctccaaccagcgttcccaaaacagagccgcctctcaaaccagcaatccagcactgcgagccctgagaggtttccaatgcacaaaaaagaagaaacaaaaacaaaaccatacacacacacacacatactacaagttgagccattattttgagttttttttttttttttttctatttgaatgtctgcactcttgtgtttgtaatatacactgagcaagggagtggattggcacaacttgtgtcagcgcagctctttagctctcccagctaagcaggactcttctctacttttacctcaacgcccttttgggcaaaatctgtcacaaggtcttgggtttattgggtggcggggagggaactctacaggaaagagatggagggggagtcgaccttttgagaatgatatatatatacatatatatatatattttcctttttatgagcgtgtgttttaaccttttctccttttaccgtcttttacaagcgaggtgacctgggtgtcatgcccattactactttcctcccatcttagcgaagaacacccaagtctttatgtgagtgtgtgaatgtgtgtgtgtctctgtatatacatgttctgctgtatgagagtgtgttcgtgtgcgcacgtgtgtttcatggcaggccactgaattgtaaagggaaatcaaggagataactgctgtaaatgcctcagatttgttgtttttatattcacacatacagtacatataagcatatatttacatctatagagcaactttgagacatatgacttaaaaacaggcctcccagaggctggtgtgggtatttgtagcagtcctgaatcacttattaattgaagtgctttgaattacacgtgtgttagcgtgatgctaatgctacaaggaagggatttgcactccttttgtgcctgaaacatggaaaaacaaaaaaatctcatcaaatcaaagtaattgaatccatttcaagtattaagtgagttcaggtctgatgtgtagcagtagtaaccgcggtcgggccggtgactggctcagcattgggacctgttctgaaggcatagcaacacggagtacggtcttatcagccattctttctgtgtgtgaaaaagcaggatctttaattttctttggacctgattatctgaaagattttatgatgaaactgctggacgttgctttaatttgttgatttttttttttctttttaaaaagtagtttcaagggccggaaaccaatgtagttttttttttgtgttttttttttttggaggtctcctttgctaactggccaattcattgcactgacccgggacgctaggcaagcaacagagggcactctcaatctctcttacctttatgcatttatacatacgaatcaacaaagcagatttgtaaaagtttaatataagatgttttgtggttatcttaaaaaaaaaaaaaagagctgttgtttaggattagtagtttaccattgatgttgttgttctcgttgttgtcaatgttgttactattgtgatgaaattttacggttggccagcgaagccagttctatagttactagtgcgattcaggaatagacttcagttgtcgagctgcaggttaaagggggtagagctttgggtttggagcatttcattttgtagcatttgggttcatggtgagaaggaggaggagaagttaggccccaggacggaggaattcatgctttctcgttgggatgtgagttaaatctagcagcaggttgaaggtcatagtgtagcactcgagatctgccgctgcgatcatcgctcagctggcgtcggctggaggaagatccgatagatggagacaatcagggatcgaaatcagactgaacctagatttaatggatttgtttaaagcggttttgcgattggcaatgagttgaatttttagactttttaacaaaaaaaaaacggtttctattactctgtgtgtatttgaggtatacccatcttaaagtctctgaaagctatttgaccgtgtttgtttcacatttatatgcatttttaacactggattaaaggaattgaaaaataagcataagcactgcccttggaccccctgtgcaaacactcagcagcctgttacggcgacagctggcaggcgtagcgccccctggtgttgcgatcggtaaaaacgcaggatgggtcgggtcgagacgggacgggagggtttggaggagaggtcgacgtgcacgcctcatcagggggggacagctcagtgaaaacgcttttgtaataaaccacccgtaaagcagcaggtttactatgaatgagtttgagcacccgcctgttggaggcgtgggcgttggcgatggcgttggcaggaaacatggagggctgg

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