LOCUS       XM_014251222            1317 bp    mRNA    linear   VRT 21-SEP-2015
DEFINITION  PREDICTED: Pseudopodoces humilis VCP-interacting membrane
            selenoprotein (VIMP), transcript variant X1, mRNA.
ACCESSION   XM_014251222
VERSION     XM_014251222.1
DBLINK      BioProject: PRJNA217046
KEYWORDS    RefSeq.
SOURCE      Pseudopodoces humilis (Tibetan ground-tit)
  ORGANISM  Pseudopodoces humilis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Paridae; Pseudopodoces.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_005087564.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Pseudopodoces humilis Annotation
                                           Release 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 6.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1317
                     /organism="Pseudopodoces humilis"
                     /mol_type="mRNA"
                     /db_xref="taxon:181119"
                     /chromosome="Unknown"
     gene            1..1317
                     /gene="VIMP"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 mRNA, 11 ESTs, 5 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 2 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:102106040"
     CDS             14..583
                     /gene="VIMP"
                     /codon_start=1
                     /product="selenoprotein S isoform X1"
                     /protein_id="XP_014106697.1"
                     /db_xref="GeneID:102106040"
                     /translation="

MEPGGDGPAAGPGPALGRGGLEALQHTAGSVLSSYGWYMLLAVVAVYLLVQKVSRSLASRPSGRPGAAEAAEEPDAVVRRQEALAAARLRMQEELNAQAERYKEKQRQLEEERRRQKIAMWESMQEGKSYKGNLKLNQQEVESGASASAVPKSKPNKKPLRGGGYNPLSGEGGGTCSWRPGRRGPSAGG"

     misc_feature    71..580
                     /gene="VIMP"
                     /note="Selenoprotein S (SelS); Region: Selenoprotein_S;
                     pfam06936"
                     /db_xref="CDD:462043"
ORIGIN      

tcggcggcgggtgatggagcccgggggtgacggtcccgcggcagggcccgggccggcgctgggccggggcggcctggaggccctgcagcacacggcgggctcggtgctgtccagctatggctggtacatgctcctggccgtcgtcgccgtgtatcttctcgtgcagaaggtgtcccgcagcctggcgtcgcggccgagcggccggcccggagcagctgaggcggccgaggaacctgatgcagtggtgagaaggcaggaagctttggcagcagctcgcctcaggatgcaagaggaattgaatgcacaagcagaaagatacaaggaaaagcaaagacagctggaggaggagaggcgaaggcagaagatcgcgatgtgggagagtatgcaagaaggaaaaagctacaaaggaaacctgaaactgaatcagcaagaagtagaatctggtgcctctgcctcagcagtcccaaaatctaaaccaaacaaaaagcctttgagaggaggtggctataacccactgtctggagaaggaggagggacgtgctcctggagacccggccggcggggcccgtcagcaggtggatgaggctaacgtccctagtgtcctctggcactatcaggcttgatcttaccccctgtctagctgcctgcagctggcctgtcacaaggactcctttgggactggttcagtgcacttgttaacttaaaacagatattgtttgtttgatttacaccctttccaaattgtaagacattggctgatgctacaccagaaaaatacctgatcctcttagagagggcaaagagaaaatttcagtataatcagttaattttcactcttctgtagagagggagtctagtctccagccaggatgaatcacctgtgattgtgagatctgggctctctgacaaatttagttatctatgctcactttacctctgtgagatgaggatatttaccatcctcagatgtgttaccagatttaccttccaactaaacacagtcatttagagagtaaggatattatcattggcagacaccttgaatttagggagggggactttcagaaaaagcacaggtgatctgacaaatgtcacggatttgcaccaaaggccagttatggcagaagagtctctgtgacaagccagcttgaatgatgttttccttataaatggtaaacaaaccagtgaggattactgatgatagacagcagacaggggggttcttgctattccttttttttttcttttttttttattgcaactgctttgtaaaaacaagacactattaatattaaatataattgcaaacatcgtaaa

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