LOCUS       XM_013012190            1041 bp    mRNA    linear   ROD 26-JUN-2015
DEFINITION  PREDICTED: Dipodomys ordii VCP-interacting membrane selenoprotein
            (Vimp), mRNA.
ACCESSION   XM_013012190
VERSION     XM_013012190.1
DBLINK      BioProject: PRJNA287906
KEYWORDS    RefSeq.
SOURCE      Dipodomys ordii (Ord's kangaroo rat)
  ORGANISM  Dipodomys ordii
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia;
            Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_012267231.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Dipodomys ordii Annotation Release
                                           100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 6.3
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1041
                     /organism="Dipodomys ordii"
                     /mol_type="mRNA"
                     /isolate="6190"
                     /db_xref="taxon:10020"
                     /chromosome="Unknown"
                     /sex="female"
                     /tissue_type="kidney"
                     /collection_date="26-Jun-2006"
     gene            1..1041
                     /gene="Vimp"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 13 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 4 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:105982543"
     CDS             63..626
                     /gene="Vimp"
                     /codon_start=1
                     /product="selenoprotein S"
                     /protein_id="XP_012867644.1"
                     /db_xref="GeneID:105982543"
                     /translation="

MEPDGEQLSTRPALETEGLRVLHATVGSLLATYGWYILFSCIVLYVVIQKLSTRLRALRQRQLEQAEAAVEPDVVVKRQEALAAARLRMQEELNAQVEKHREKLRQLEEERRRQKIGMWDSMQEGKSYRGNARKPQEDNTPEPSTSSVIPKRKSDKKPLRGGGYNPLTGEGSGTCSWRPGRRGPSGG"

     misc_feature    66..623
                     /gene="Vimp"
                     /note="Selenoprotein S (SelS); Region: Selenoprotein_S;
                     pfam06936"
                     /db_xref="CDD:462043"
ORIGIN      

aactacagaccggaagtgttggctgaaggcgacgcgggccgggccgggcgccagtcgccaccatggaaccggacggagagcagctgtccacgcgaccggccctggagaccgaggggctccgcgtccttcacgccacggtgggctccctgctggccacctatggctggtacatcctcttcagctgcatcgtcctctacgtggtcatccagaagctttccactcgtttgagggccttgaggcagaggcagctggaacaagcggaggccgctgtggaacctgatgtggttgttaaacgacaagaggccctagcagctgcccgtttgaggatgcaagaagaactcaacgcgcaagtggaaaagcacagggaaaagctgaggcagcttgaagaagagaggcggagacagaagattggaatgtgggacagcatgcaggagggcaaaagctatcgtggaaatgcaagaaagcctcaggaagacaacactcctgagccttctacatcatctgtcatccccaaacggaagtctgacaaaaagcctttgcggggagggggttataaccctctgacgggtgaaggcagcggcacctgctcctggaggccaggccgcaggggcccatcgggtggatgaagctaggaatcctcgtcctagtgttgtttctggcattagcgagatgaacccttgatgctccattcaattgccttacgcacgcttttcgcagtggctagcgggggaagtgggctgacgcctgcccttggtgcagcgaaggactcggtcgggtgggtgcgagcattgccccctgcacactctgaggcccagcgggtgaccactgacttcctggctggccgctagcagacgaggcagggagcacccacgagagtccctgcgccgtgcgtggaatgatgtcttccttataaatggtgagccaccagtgaggattactgatgcgacagttgatggggttccttcctgtatagtcacctgtacagaactttgtagaagagaaattgtgaatattaaaaaggaaaaaaccaacaaaaccaga

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