LOCUS       XM_011430814            4102 bp    mRNA    linear   INV 18-MAY-2020
DEFINITION  PREDICTED: Crassostrea gigas protein argonaute-2 (LOC105329532),
            transcript variant X3, mRNA.
ACCESSION   XM_011430814
VERSION     XM_011430814.3
DBLINK      BioProject: PRJNA629593
KEYWORDS    RefSeq.
SOURCE      Crassostrea gigas (Pacific oyster)
  ORGANISM  Crassostrea gigas
            Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia;
            Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae;
            Crassostrea.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_047559.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On May 18, 2020 this sequence version replaced XM_011430814.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Crassostrea gigas Annotation Release
                                           102
            Annotation Version          :: 102
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4102
                     /organism="Crassostrea gigas"
                     /mol_type="mRNA"
                     /db_xref="taxon:29159"
                     /linkage_group="1"
     gene            1..4102
                     /gene="LOC105329532"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 57 long SRA reads, 8 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 202 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:105329532"
     CDS             150..2951
                     /gene="LOC105329532"
                     /codon_start=1
                     /product="protein argonaute-2 isoform X3"
                     /protein_id="XP_011429116.1"
                     /db_xref="GeneID:105329532"
                     /translation="

MFPIAPGGQTPFSPFPAMQEGQSSIPFSTFPTEGQSSGLPFTSFPTDGQTSIPFSVFPPVQPPEGGFAFPPPQPPPGPPSGPPKPPGPPGPPKPSDFICPPRPNYGTEGKPILLRANHFQVRIPKGVLHHYDISIVPDKCPRRVNREIIETMVTAYSQKIFSGQKPVFDGRKNLYSREPLPIGREKVELEVTLPGEGKDRVFNITMKWVQQISLFGLEEALQGHTREIPQDAITAVDIIMRHLPSMTYTPVGRSFFSPPEGYDHPLGGGREVWFGFHQSVRPSHWKMMLNIDVSATAFYKAQPVIEFMCEVLDIKDVNEQKRPLTDSQRVKFTKEIRGLKVEITHCGTMRRKYRVCNVTRRPAQTQSFPLQLDSGQTVECTVARYFLERYKMKLQYPHLPCLQVGQEQKHTYLPLEVCNVVGGQRCIKKLTDMQTSTMIKATARSAPDREREINNLVRKANFNADPFLQTFGININPMMCDLQGRVLHPPKILYGGRTKAQAVPNQGVWDMRGKQFYSGTEIRVWAIACFAPQRTVREDALRNFTQQLQRISNDAGMPILGQPCFCKYATGPDQVEPMFRYLKNTYQGLQLIVVVLPGKTPVYAEVKRVGDILFGLATQCVQAKNVNKTTPQTLSNLCLKINVKLGGINNILLPSIRPSIFREPVIFLGADVTHPPAGDASKPSIAAVVGSMDAHPSRYSSTVRVQQHRQEIIQELSSMVRELLIHFYKATRFKPTRIIFYRDGVSEGQFQQVLQHELRAVREACMKLELGYQPGITFIVVQKRHHTRLFCADRKDQIGRSGNIPAGTTVDVGITHPTEFDFYLCSHAGIQGTSRPSHYHVLWDDNRFNADELQTLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVEKEHDSGEGSRHSDNSEDRTPSAMARAVTVHPDTTKVMYFA"

     misc_feature    477..869
                     /gene="LOC105329532"
                     /note="N-terminal domain of argonaute; Region: ArgoN;
                     pfam16486"
                     /db_xref="CDD:435368"
     misc_feature    897..1049
                     /gene="LOC105329532"
                     /note="Argonaute linker 1 domain; Region: ArgoL1;
                     pfam08699"
                     /db_xref="CDD:430160"
     misc_feature    1050..1412
                     /gene="LOC105329532"
                     /note="PAZ domain, argonaute_like subfamily. Argonaute is
                     part of the RNA-induced silencing complex (RISC), and is
                     an endonuclease that plays a key role in the RNA
                     interference pathway. The PAZ domain has been named after
                     the proteins Piwi,Argonaut, and Zwille; Region:
                     PAZ_argonaute_like; cd02846"
                     /db_xref="CDD:239212"
     misc_feature    order(1206..1208,1251..1253,1293..1295,1305..1307,
                     1359..1361,1380..1382,1386..1388)
                     /gene="LOC105329532"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]; other site"
                     /db_xref="CDD:239212"
     misc_feature    1545..2822
                     /gene="LOC105329532"
                     /note="PIWI domain, Argonaute-like subfamily. Argonaute is
                     the central component of the RNA-induced silencing complex
                     (RISC) and related complexes. The PIWI domain is the
                     C-terminal portion of Argonaute and consists of two
                     subdomains, one of which provides the...; Region:
                     Piwi_ago-like; cd04657"
                     /db_xref="CDD:240015"
     misc_feature    order(1956..1958,1968..1970,2004..2015,2022..2024,
                     2046..2048,2055..2057,2067..2069,2079..2081)
                     /gene="LOC105329532"
                     /note="5' RNA guide strand anchoring site [active]"
                     /db_xref="CDD:240015"
     misc_feature    order(2160..2162,2166..2168,2376..2378,2790..2792)
                     /gene="LOC105329532"
                     /note="active site"
                     /db_xref="CDD:240015"
ORIGIN      

accggatataggcgtcgcgtcgcgattgaagcgccctctttggctctagtcatagttgtgaacattgctcaaaattacaaagtcaaagtgaatttacgaagcctttgagggcacaatttacagataatctgtaaacatataatgccaatatgtttccgatagcgccaggtggacagacccccttctcacctttccctgctatgcaggaaggtcagtcgtccattccattctcaacatttccaacagaaggtcaatcttcaggcctgccgttcacatctttcccaacagatggccagacttcgattccgttttcggtattcccacccgttcagccaccggagggaggatttgccttcccccctcctcagcccccacctggcccgccttcaggaccacccaagccaccaggacctcccggtcctcccaaaccatcggactttatatgtccgccccgtcccaactacgggacggagggcaaaccaatcctactgcgtgccaatcatttccaagtgcgtattcccaagggagttcttcaccactacgatatttcaatagtgcctgacaaatgtccacgaagagtcaacagggagattattgagacaatggtaactgcttatagccagaaaatcttctcagggcagaaaccggtgtttgatggacgcaaaaacctctacagtcgcgagcctcttcccattggtcgagaaaaggtggagctggaagttactctcccgggggagggcaaggaccgcgtctttaacataacaatgaaatgggtccagcagatcagcctgtttgggctggaggaagcactgcagggccacacccgggagattccccaggacgcaatcaccgccgtcgatattatcatgcgtcacttgccaagtatgacatacactcctgtgggacgttcattcttctccccaccggaggggtacgaccaccccctgggagggggcagggaggtgtggttcggcttccatcagagtgtgaggccctcccactggaaaatgatgctcaacattgacgtatctgccactgccttttacaaagcgcagcctgtgatagagttcatgtgtgaagtgttggatatcaaagacgtcaacgaacagaaacgccccctcaccgattctcagagggtcaaatttacgaaggaaatcagaggactcaaggtagagatcactcactgtggaaccatgagacgtaaatatcgcgtgtgtaacgtgactcgacgacccgcccagacacagtcgtttcccctgcagctggactcgggacagaccgtggagtgtaccgtggcccgctacttcctggagcgatacaaaatgaagctacaataccctcacttgccatgcttacaagtcggccaggaacagaagcacacctatcttcctctggaggtgtgtaacgtggtgggcggccagaggtgtatcaagaagctgaccgacatgcagacctccaccatgatcaaggccacagcccgatctgccccggacagagagagagaaatcaacaaccttgtgaggaaagccaacttcaacgctgatccatttctacaaacatttggaataaacatcaacccaatgatgtgtgacctccagggcagagttcttcatcctcccaaaatcctgtatggaggaaggaccaaagcccaggcagtgccaaaccaaggtgtctgggacatgaggggcaagcagttctactcggggacggagatcagggtgtgggccatcgcttgtttcgccccccagaggacggtcagggaggacgctctcagaaacttcacccagcagctacaaaggatctcgaacgacgctgggatgcccattctaggccagccttgtttctgtaaatacgccacaggccctgatcaggtggagcccatgttccgatatctcaagaacacttaccaaggcctccagctcatcgtcgttgtactgccgggaaaaacacctgtatatgctgaggtgaagcgtgtgggtgacattttatttggattagccacacaatgtgttcaagccaaaaacgtgaacaaaacgaccccccagaccctgtccaatctctgcctcaagatcaacgtcaagctgggcggtatcaacaacatccttctgccaagtattcgtccctccatatttagagagcccgtcatattcctgggtgctgatgtgactcatccccccgcaggagatgccagtaaaccatccatagctgcagtggtaggcagcatggacgcccaccccagccgctactcctccacggtacgagtccagcagcacagacaggaaatcatacaggagttgtcttccatggtgcgggaactcctgatccacttctacaaggcgacgcgattcaagccgacgcgcatcatcttctacagagacggcgtcagtgagggacagttccagcaggtgttacagcacgagctgcgtgccgtgagagaggcctgcatgaagctggagctgggataccagcccggtattaccttcatcgtggtccagaagagacaccacacccgactgttctgtgccgaccgcaaggaccagataggacgaagcggaaatatcccggccggaaccaccgtggatgtcggaatcacccaccccacagagtttgatttttacctgtgtagtcatgctggtatacagggcaccagtcgcccctctcactaccacgtcctgtgggacgacaaccggttcaacgcggacgagctccagacgctgacctaccagctgtgtcacacctatgtccgctgtacccgcagtgtctccatccccgcccctgcttactatgcacatctagtcgccttccgggcccgctaccacctggtggagaaagagcacgacagtggagaggggagtcggcactcggacaacagtgaggacaggaccccctcagccatggcccgggcggtcaccgttcaccccgacacaaccaaggtcatgtacttcgcctgatcaggggagatcaatccaggccctgtgttgttccttcctgggagggagaattctctgcatttttatgtattcagcgaaaaaaaaaaatgtgtggttcagatagactgtgctagaaccacgcgtgggtattaactatttattgtatagaactgtgcttttatttttgtttttacaagtagtcatggaaaccatttttgacctggtagagcatacattccactatttctacgattttttttaaaacttgatgcatccttgacacaattttgcagcttgttgttgccattagaggtgcatgtggtgcttagaagctcaaaatgaatcttctgccataactgaggaaatctcagcagcgtttcgattgttatatgagatgccatttcataagcatatctacatttcagtcattccatgtatttgggtgtgagcccactatggcacaatactccctgcccctccattatagcttagcatatcatttgttgtattagctatttatgttttcgacttgccattgtttattttatagtcccaccaaaagcagcggtaacagtccacctatgtcagagactagcaatgccacctgtcaaagggagaaaaccccctctttatttgctaccactttattttctttcttgtagtcccgttgtgtataggttcctatttatagtccagtagtattgtattttttttttattattaatctattgtttgagagaaaagaaaaaaatacaaaaacaaacctgtgaccttatgaccctgcataattagtctagtcatgttgtgtaatgagcatatcatgtcgtctcggggtgatgttgtatccatatcacgagccttccagacagatcgggacgtagcagccgtcaactacttactgaaccctcgcctgtgatatgcctcagtgaactccgtggtgtgtggtccactggtttcatggtgttgtgtaaggcccccctaccccctctctctctctctctctctcagtcccacacaggagaagcaggcatggaagggtgctctctgatgacttcactctctacctctccgatgacaatctctagattctcttctgtgctttatgtctttcctcttctccccacccttcaaatacaaaacaaaaagtgcaataagtagcattacaaagtaaa

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