LOCUS       XM_006794389            7033 bp    mRNA    linear   VRT 24-AUG-2020
DEFINITION  PREDICTED: Neolamprologus brichardi argonaute RISC catalytic
            component 3b (ago3b), transcript variant X2, mRNA.
ACCESSION   XM_006794389
VERSION     XM_006794389.1
DBLINK      BioProject: PRJNA232513
KEYWORDS    RefSeq.
SOURCE      Neolamprologus brichardi
  ORGANISM  Neolamprologus brichardi
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes;
            Cichlidae; African cichlids; Pseudocrenilabrinae; Lamprologini;
            Neolamprologus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_006272033.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Neolamprologus brichardi Annotation
                                           Release 101
            Annotation Version          :: 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.5
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7033
                     /organism="Neolamprologus brichardi"
                     /mol_type="mRNA"
                     /isolate="N.brichardi 1_Salsburger"
                     /db_xref="taxon:32507"
                     /chromosome="Unknown"
                     /sex="female"
     gene            1..7033
                     /gene="ago3b"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 7 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 1 sample with support for all annotated introns"
                     /db_xref="GeneID:102786067"
     CDS             301..2904
                     /gene="ago3b"
                     /codon_start=1
                     /product="protein argonaute-3 isoform X1"
                     /protein_id="XP_006794452.1"
                     /db_xref="GeneID:102786067"
                     /translation="

MEIGTTGAVEAQALFTLPRRPGYGTLGKSIKLLANCFQVEIPKIDVYLYEVDIKPDKCPRRVNREVVDTMVQHFKVTIFGDRLPVYDGKKSLYTVSPLPVATGGVDLDVTLPGEGGKDRPFKVTIKFVSLVSWHMLHEVLTGRGAPGPLDLDKPLSTNPVHAVDVVLRHLPSMKYTPVGRSFFSSPKDYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLDIHNIDEQPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVCNVTRRPASLQTFPLQLENGQTVERTVAQYFREKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLVRSANYDADPFVQEFQFRVRDEMAQVTGRVLPAPMLQYGGRVSSEPFMNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQRQCREEILKSFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYAGLQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPHQRPTVFQQPIIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPCRYCATVRVQRPRQEVIQDLASMVRELLIQFYKSTRYKPTRIIFYRDGVSEGQFRQVLYYELLAIREACISLEKEYQPGITYIVVQKRHHTRLFCADRTERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGTSRPSHYHVLWDDNCFTADDFQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHVSGQSNGRDPQALAKAVQIHHDTLRTMYFA"

     misc_feature    517..801
                     /gene="ago3b"
                     /note="N-terminal domain of argonaute; Region: ArgoN;
                     pfam16486"
                     /db_xref="CDD:435368"
     misc_feature    829..981
                     /gene="ago3b"
                     /note="Argonaute linker 1 domain; Region: ArgoL1;
                     pfam08699"
                     /db_xref="CDD:430160"
     misc_feature    982..1344
                     /gene="ago3b"
                     /note="PAZ domain, argonaute_like subfamily. Argonaute is
                     part of the RNA-induced silencing complex (RISC), and is
                     an endonuclease that plays a key role in the RNA
                     interference pathway. The PAZ domain has been named after
                     the proteins Piwi,Argonaut, and Zwille; Region:
                     PAZ_argonaute_like; cd02846"
                     /db_xref="CDD:239212"
     misc_feature    order(1138..1140,1183..1185,1225..1227,1237..1239,
                     1291..1293,1312..1314,1318..1320)
                     /gene="ago3b"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]; other site"
                     /db_xref="CDD:239212"
     misc_feature    1477..2775
                     /gene="ago3b"
                     /note="PIWI domain, Argonaute-like subfamily. Argonaute is
                     the central component of the RNA-induced silencing complex
                     (RISC) and related complexes. The PIWI domain is the
                     C-terminal portion of Argonaute and consists of two
                     subdomains, one of which provides the...; Region:
                     Piwi_ago-like; cd04657"
                     /db_xref="CDD:240015"
     misc_feature    order(1909..1911,1921..1923,1957..1968,1975..1977,
                     1999..2001,2008..2010,2020..2022,2032..2034)
                     /gene="ago3b"
                     /note="5' RNA guide strand anchoring site [active]"
                     /db_xref="CDD:240015"
     misc_feature    order(2113..2115,2119..2121,2329..2331,2743..2745)
                     /gene="ago3b"
                     /note="active site"
                     /db_xref="CDD:240015"
ORIGIN      

ctttcccttaagtatgacagaaggcggcgtaagagcagatttcagaccggtttatcgccgacgctgaggaggacgccgagtttatgtaggtcaggtgtagtggggagacaagaagacttctaaccgacgggacagcgaagcggcccggttcgacttcaccgaacgaagccggggagaagatatcacgaacggcggagcttggctgatgcgtgcggggccagccgaaccacactgaacgttttaatctacgaggattattgatcataacgtgccggttcatccggacagacacccccatgaatggaaatcggaacaacaggagccgttgaagcccaagcgctattcacattgccacggcgaccgggatatggcacccttggaaaatccatcaagcttctggccaactgttttcaggtggaaatccccaagattgatgtctacctgtatgaggtggacattaagcctgataaatgcccgcggcgggtcaatagggaggtagtggacaccatggtgcagcattttaaggtgaccatctttggtgaccggctgccagtttatgatgggaagaagagcctctacactgtgagcccacttcctgtcgccactggtggggttgatctggatgtcaccctgccaggtgaaggtgggaaggaccgaccttttaaagtcacaattaaatttgtgtcattagtcagctggcacatgctacatgaagtcttgaccggacgtggagcaccagggccactggacctggataaacctctgagcactaaccccgttcatgctgtggatgttgtccttcggcatctgccctccatgaagtacacccctgttggaagatccttcttctcctccccaaaggactatgaccatccactaggtggaggaagagaagtttggtttggcttccatcagtcagtacggccagccatgtggaagatgatgctaaatattgatgtgtcagccacagctttctacaaagcccagccagtcattcagttcatgtgtgaggttctggacattcacaacattgacgagcagccacgccctctcacagactcccacagggtcaagttcaccaaagagatcaaaggtcttaaagtggaagtgacacactgtggaaccatgcgtaggaagtacagagtctgcaatgtaacacggcgccctgccagcctccagacatttccattgcagcttgagaacggtcaaacagttgagcgcacagtggctcagtacttcagagagaagtacaatctgcagctgaaatatccccacctgccttgtctgcaggtgggacaggaacagaaacacacctacttgcctctagaggtgtgcaacattgtagcaggacagcgctgtattaaaaagctaacggacaaccaaacctcaaccatgatcaaagccacagcccgctctgcaccagacagacaagaggagattagcaggctggtgcggagtgcaaactatgatgccgacccgtttgtccaggagtttcagttccgtgtgcgagatgagatggctcaggtgacgggtcgcgtcctgccagcccccatgctgcagtatggtggcagggtgagctctgaaccctttatgaaccgcacggtggccacacccagtcacggggtttgggacatgagagggaagcagtttcacactggagtggagatcaagatgtgggccatcgcctgctttgccacccagaggcagtgcagagaagagatcctcaagagcttcactgaccagctgcggaaaatctcaaaggatgctgggatgcctatccaaggccagccctgtttctgtaaatatgcccagggagctgacagcgtggagcccatgtttagacacctgaagaacacctacgctggactacagctcatcatcgtgatcctacctggcaaaacaccagtctatgctgaggtgaagcgggtgggtgacaccctcctcggcatggccacccaatgcgtgcaggtgaagaacgtagtaaaaacgtcccctcagaccctctctaacctctgcctcaagatcaatgtcaaactgggaggcatcaacaacattctggttccacatcagcgacccactgtgtttcagcaacctatcatcttccttggggctgatgtcactcatcctcctgcaggagatggaaagaagccatctattgcagcggtggtaggcagtatggatgcccacccctgcaggtactgtgctacagtgcgggtccagaggcctagacaggaggtcatccaggatttggcctctatggtgagagagctcttaatccagttctacaagtcgacccgctacaagccaacaaggatcattttctacagggatggagtgtcagagggccagttcagacaggtgctgtactatgagctgctggccatcagggaggcatgcatcagtctcgagaaggaataccagcccgggataacctacatcgtcgtgcagaaacgccatcacacacgcctgttctgcgcagatcgcactgagcgggtgggacgaagtggaaacattcctgccggcaccacagtggacacagacatcacccacccatacgagtttgacttttacctctgcagtcacgctggaatccagggtaccagtcgtccttctcactaccacgtactgtgggatgacaactgtttcaccgctgacgatttccagctcctcacttaccagttgtgccacacctacgtccgctgcacacgctccgtgtccatcccagcacctgcctactatgctcaccttgtagccttccgcgctcgctaccacctggtcgacaaagagcatgacagtgcggagggcagccatgtctcagggcagagtaacggcagggacccccaggctctggccaaggctgttcagatccaccacgacacactgaggaccatgtacttcgcctaaacacccctccacttcactcctcctcccagttactcagccagtcttagtgcccaacttcctcctgatccggagtgactctgtgctggcgcagctttgctgaagccaaacaacgacagcggctgtgtaggaatgtcctagaggagtccagccatgttatctaatctgaaaccagccaatgtactccggacctccatctcattctccctgtgagccgtgtcctcgccttctgcattttacagacactcagtttgatttttatgggattatttggggttttaaagaatggtggagcagccagtaatcaaaaaatatattatttttggtgcattggtggtagaatcacagaggacctgacctgctttgtaacctcatgttgagcctaatgttcatgtttgttctttggctttctagagcctgtctgtgttgtttctctgagcaagtgtgtgatcgatgtggcagcatgttagctttggcaccttttgtaaatgggcgggctgccttagtggtttctcttctgtctccctttaagccagttctgtgtggttcctcagtctgtcagccagacagtaagcagcataactttgcactctaccaacacagacactgaatgaaatcttcatttttctaagcagagccacgtacagccgttttgaggcattgtcgtttgtcgccttattgtgaggcgaggtgcataaacagaactataagattcaaagtcattgccatgaaatggactttgttcttgtttgtctgactatttatgatttttctttttccttaacttaaattaataataatttacagcaatagtgtgtagatgaccacaaacctttggacttttcccagtttttacttttaaagagagaaaaaactgaccgattcagttgtgaagaactccttcagtgcaataacgtgttaaaatggagagcgcaggtgtgttttcatgagtatttgtgttgttcttaatgagatctgggaagtgacaatgaagatggaatcaggaatgtgcagtatttgacattctggtgaccgtgtaggactgatgcctcagacgtgaggctcggtcgtggtgaggtctgattgtgtttgaggaggtttgttctgttaaagtgcctgatatgtttagaaattgaacaactggtaggatggaaggtctttttgaaacggtttgggtgcctcaaaacagtcgatttgttaacaacacacacagcacactggattgtagatgatcctaccgccagccacgtgtgattgctaatgtttgctgcgttttttgttttgtttttctaaatcacagatctgaatatgaaaaatgtttgaggtcctacagactcatcatgttaaccagaaaaaatagttttcatgatttttacagctaatctttgtttttttctttgttttttttcggcacatagatgatttgaacagtaattatatttgaccgctctccttggtcatgttttctaaatggtgcttttggtctcctggttccagacctctaaatgcatttcatttggtttatttgctagagaaaacctttacatcggctaaaaacatcaaaaatacactcactgttcaccaacctggttttccagataatgaaatgatcaaactcaaggcagcagctttgattcttatttttttccattttttggtaaatgtatttaacaatctcaaacgagattataaattttgtgtttgagaaggattcgctgtcccagcctttgaaattcagctttttattgctgggttatgtctcatttgttttcacaaacaaatttggattagtgcagctacaaaggccttattttcagtcatttgcatgtttaaaaaaaataaataaatcagaagtctgtaaactctgagggcgatgcatcaaatttcttttgttggaccccaagagtctaaaatctaaatgtgtggttcattatcatgtatgatgaagaacggtaacgcgttttccttgaaatataatgaaattaaataaaaatgcacaatgcatcagctgctattggccctgctaactgatctcagcagctataatcactgatgcagggccactatttatctggtgcatcccatctattttgagctagacaaacatgaaaaatttatggaaagagctttgtttatttaaaagaagaagaaataatgacaacaaaaaccagtatctgacaagttaatcgactaatcgactgaaaatcaactaatcgttgcagtttgagtgccaagacgacacttttctcaaaagcagagttatctttttttttttttttttctggggggttttcctctctatttggatttgcaggtggtgatgttgacatctttatttgtttatttttcaacttttagtccatcattgacgtctctgcactgctgctattgttggacacccagccccacgcaggctgttgctcatctcaaaccttcagtttactttaacacaaatgaagccttcaggtttcatcccttggaccaaacccatgtgcctggtcggggtgagtgctgacgctctccttgccacgtgtcaccagaatcagctgctataagaggagttttatttaatatttcagcagataaacataaatactgtatatttatacacaaaaagcgaaaaggatattttactgcacttaacagaaattcaagggggagagaagtgctatgtttggccgaggctgtttcttaatgtcagacattaccagcatttgttttggttgtttttgttttggggggggttgtttgctttttacttgaacaatagcaaaagtaatggcgggcatatttaacgttgtttgctggtgctctgctcgtctctgtaagttgacctttagacagccttattacaggaacccccttctccactagtgatgccacaggacttcagatgcctttttttccccttttaaagaaaaaaaaccatatttatatttaaacttaataatgaaatgcatgtattgcttatttttctaacaaagtcctatttgaagcagaagcctaataactaataacgtcgaggtctgcgataactttccaaatttaggtttatgtatgcgatcaaggtttgtgttgtcgtagagcgatcagatgaatcctcagccctcctcacactctgtttgtgttatcatctcaaaagctcatctgagaagctttaggacattgtttgatttttattcatatactaaactttttttcttttgcatattaatgagaggaggttttattttggggggggggttgttttcctgtccgttacagactgtgcctttttctgatggtgctggaaaaaaaatgttcaaaaagtgtgctgagcccagagtctacattaatacgtatatattaatacctgaaaatactgtaatgtgtgtatggatacctctgacatgtatgccaagaacacaaaaatttgcagaatttatccgttttgagctgacaggaccaaaaggcctgcagggattggtttattggacgggcactcaagcacaacctagaaccaaacatttttcagtaatacaaatcataacttgggcgggggggttgggtgggaagcactcatgactcgtaggtaacgaatatctcagtgtagacatgatgtagcatatttatttatttctgtgaggcgtactgcatgttgtcctcggttggcgttttgagttttgtgtgttcgttctgaaatggacagcaataatgaagcagctgtaaaaatttctgtgcaatcggtttggccggccttcctttttctccgtgtttgcgtgtctctgtctgaaaacttcattttgatttcgaatgtgaagttcagacgtttacagacttggacaaagagcttttgtttctccacgagtgcccgtctcccatgttaagggattccccacaaaataaatgaatctttagatgcctcagaaggttggctgcatatcattcttgaaggaaaaaaaatatttgagtttgaaaatgtgttttgtctttttttttttctgtttttttaatttatgatattaataataagtacaactgtatgttaaagaacttttaaagtttgtcttaacactcacctgatcctggtcctaagttgagccttttttatttgtcatatttaatttttggaataaatactctatgtataaaa

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