2024-04-24 16:51:51, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_006688023 383 bp mRNA linear PLN 13-SEP-2023 DEFINITION Yamadazyma tenuis ATCC 10573 ribosomal protein L36e (CANTEDRAFT_125240), mRNA. ACCESSION XM_006688023 VERSION XM_006688023.1 DBLINK BioProject: PRJNA225504 BioSample: SAMN00715317 KEYWORDS RefSeq. SOURCE Yamadazyma tenuis ATCC 10573 ORGANISM Yamadazyma tenuis ATCC 10573 Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Yamadazyma. REFERENCE 1 (bases 1 to 383) AUTHORS Wohlbach,D.J., Kuo,A., Sato,T.K., Potts,K.M., Salamov,A.A., Labutti,K.M., Sun,H., Clum,A., Pangilinan,J.L., Lindquist,E.A., Lucas,S., Lapidus,A., Jin,M., Gunawan,C., Balan,V., Dale,B.E., Jeffries,T.W., Zinkel,R., Barry,K.W., Grigoriev,I.V. and Gasch,A.P. TITLE Comparative genomics of xylose-fermenting fungi for enhanced biofuel production JOURNAL Proc. Natl. Acad. Sci. U.S.A. 108 (32), 13212-13217 (2011) PUBMED 21788494 REFERENCE 2 (bases 1 to 383) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (12-SEP-2023) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 383) AUTHORS Kuo,A., LaButti,K.M., Sun,H., Clum,A., Pangilinan,J., Lindquist,E., Barry,K., Lucas,S., Lapidus,A., Wohlbach,D.J., Potts,K.M., Jeffries,T.W., Zinkel,R., Gasch,A.P. and Grigoriev,I.V. CONSRTM US DOE Joint Genome Institute (JGI-PGF) TITLE Direct Submission JOURNAL Submitted (09-MAY-2011) US DOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA 94598-1698, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_006281246). ##Metadata-START## Organism Display Name :: Candida tenuis ATCC 10573 GOLD Stamp ID :: Gi04860 ##Metadata-END## FEATURES Location/Qualifiers source 1..383 /organism="Yamadazyma tenuis ATCC 10573" /mol_type="mRNA" /strain="ATCC 10573" /culture_collection="ATCC:10573" /type_material="type material of Candida tenuis" /db_xref="taxon:590646" /chromosome="Unknown" gene 1..383 /locus_tag="CANTEDRAFT_125240" /db_xref="GeneID:18249090" CDS 20..319 /locus_tag="CANTEDRAFT_125240" /note="Alternative splicing variant 2" /codon_start=1 /transl_table=12 /product="ribosomal protein L36e" /protein_id="XP_006688086.1" /db_xref="GeneID:18249090" /db_xref="InterPro:IPR000509" /db_xref="JGIDB:Cante1_115366" /translation="
MVKSGIASGLNKGHKVTPKDVKPKISYRKGALSKRTVFVRDIVKEVAGLAPYEKRLIELIRNAGEKRAKKLAKKRLGTHKRSLKKIEDMNKVIAEARRH"
misc_feature 29..313 /locus_tag="CANTEDRAFT_125240" /note="Ribosomal protein L36e; Region: Ribosomal_L36e; pfam01158" /db_xref="CDD:426088" ORIGIN
aactactagaacgttaataatggttaagtcaggtattgccagtggattaaacaagggtcacaaagtcaccccaaaggatgtcaagccaaagatctcttacagaaagggtgctttgtccaagagaaccgtctttgtcagagacatcgtcaaggaagttgccggtttggccccatatgaaaagagattgatcgaattgatcagaaacgctggtgaaaagagagctaagaagttggccaagaagagattgggtactcacaagagatctttaaagaagattgaagacatgaacaaggtcatcgctgaagccagaagacactaaacatactttcaaagtcttttaaatcataacatctgatgtacaaataatataagtcaacattcta
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]