2024-11-05 07:05:36, GGRNA.v2 : RefSeq release 226 (Sep, 2024)
LOCUS NM_001335146 687 bp mRNA linear PLN 20-OCT-2022 DEFINITION Arabidopsis thaliana uncharacterized protein (AT2G02795), mRNA. ACCESSION NM_001335146 VERSION NM_001335146.1 DBLINK BioProject: PRJNA116 BioSample: SAMN03081427 KEYWORDS RefSeq. SOURCE Arabidopsis thaliana (thale cress) ORGANISM Arabidopsis thaliana Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. REFERENCE 1 (bases 1 to 687) AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D., Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V., Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L., Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L., Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H., Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D., Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and Venter,J.C. TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana JOURNAL Nature 402 (6763), 761-768 (1999) PUBMED 10617197 REFERENCE 2 (bases 1 to 687) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 687) AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M., Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R., Vaughn,M. and Town,C.D. TITLE Direct Submission JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute, 9704 Medical Center Dr, Rockville, MD 20850, USA REMARK Protein update by submitter REFERENCE 4 (bases 1 to 687) AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E. CONSRTM TAIR TITLE Direct Submission JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie Institution, 260 Panama Street, Stanford, CA, USA COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport. This record is derived from an annotated genomic sequence (NC_003071). FEATURES Location/Qualifiers source 1..687 /organism="Arabidopsis thaliana" /mol_type="mRNA" /db_xref="taxon:3702" /chromosome="2" /ecotype="Columbia" gene 1..687 /locus_tag="AT2G02795" /db_xref="Araport:AT2G02795" /db_xref="GeneID:28717523" /db_xref="TAIR:AT2G02795" CDS 85..507 /locus_tag="AT2G02795" /inference="Similar to RNA sequence, EST:INSD:EG489688.1,INSD:EG526643.1,INSD:EG489697.1, INSD:EG489691.1,INSD:EG489692.1,INSD:EG489690.1, INSD:EG489694.1,INSD:EG489689.1,INSD:EG489695.1, INSD:EG489693.1,INSD:EG526645.1,INSD:EG489700.1, INSD:EG489687.1,INSD:EG489698.1,INSD:EG489699.1, INSD:EG489686.1,INSD:EG526640.1,INSD:EG489684.1" /note="unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink)." /codon_start=1 /product="uncharacterized protein" /protein_id="NP_001318185.1" /db_xref="Araport:AT2G02795" /db_xref="GeneID:28717523" /db_xref="TAIR:AT2G02795" /translation="
MVSTPLSPPFSKNLLLGFLPFSCCISILVYKITSLLTTTSLLDVLLVGQQISILFMCICGVSAFMGLFNYIHRLSVGVLNEPPKPNEAMTSLLNAMKNEQESTQSLLAAAMILAVTEPENPSILTLVNALKERYATAPSI"
ORIGIN
gcttgagagactttctttcattcacagagagctagagttgcaaaatgaagtttaaattaaccatatggcttaactgctacactgatggtgagtacaccattgtctccaccattctcaaagaacttgcttttagggttcttgccattctcctgctgtatttcaatcttggtgtataagattacatcactgctcaccaccacgagcctgctcgacgtgctgctggttgggcagcagataagcatcttgttcatgtgcatttgcggggtctctgcttttatgggattattcaattatatccaccggctctctgttggggtcttgaatgagccgcccaagcccaacgaagctatgacatccttgctcaatgcaatgaagaatgagcaagaaagtacacaatctcttcttgctgcagcaatgattttggctgtgactgagcctgagaatccaagcatcctcacgttggttaacgcattgaaagaacgttatgctaccgctccttccatttaacacttgaaacacccaatgtttgcttctgtttatgtattttcttctatctagttgactttttggatttttgtttcttaggattattgtgtttcaatcctttgactcttttcggatttgtggttttatttatgaatttgtgtttcttaggagtctcttgcgtttaacctatgtatgtctctg
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@meso_cacase at
DBCLS
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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