LOCUS       NM_001280074            1083 bp    mRNA    linear   PLN 02-APR-2025
DEFINITION  Fragaria vesca homeobox protein SBH1-like (LOC101300202), mRNA.
ACCESSION   NM_001280074 XM_004309402
VERSION     NM_001280074.1
KEYWORDS    RefSeq.
SOURCE      Fragaria vesca (wild strawberry)
  ORGANISM  Fragaria vesca
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae;
            Potentilleae; Fragariinae; Fragaria.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from HQ413776.1.
            
            On Jul 22, 2013 this sequence version replaced XM_004309402.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: HQ413776.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01911327, SAMN01911328
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1083
                     /organism="Fragaria vesca"
                     /mol_type="mRNA"
                     /db_xref="taxon:57918"
     gene            1..1083
                     /gene="LOC101300202"
                     /note="homeobox protein SBH1-like"
                     /db_xref="GeneID:101300202"
     CDS             1..1083
                     /gene="LOC101300202"
                     /note="knotted-like homeobox KNOX3"
                     /codon_start=1
                     /product="homeobox protein SBH1-like"
                     /protein_id="NP_001267003.1"
                     /db_xref="GeneID:101300202"
                     /translation="

MESERWSRVPKGRETEKMESGMGKSNYYYSHGVMGSAGSSSGMLMPPPLVNSYAAAAADQTSSSSNHQHCFVSLPFTNINPNQNGSQEYEMRMKTKVMSHPLFPRLLASYVNCQKVGAPAEVVARLEDAAAASISSSAALSAACEESEPDPELDQFMEAYCEMLTKYHEELTKPFHEAMLGLSKINSQLKALSVSPSYSASTGDLVGQGGSSEEAGVNENCIDPRAKDWDIRAKLLQKYGGSLGSLSQELKKKKKNGKLPKEARVQLQEWWSRNYTWPYPSEPQKLALAASTGLTVKQINNWFINQRKRHWKPSAEGMQLAMVDHSFQKMVDHPQFFYNYMDHLICNPSPMDCTSTPMVD"

     misc_feature    274..381
                     /gene="LOC101300202"
                     /note="KNOX1 domain; Region: KNOX1; pfam03790"
                     /db_xref="CDD:461051"
     misc_feature    448..579
                     /gene="LOC101300202"
                     /note="KNOX2 domain; Region: KNOX2; pfam03791"
                     /db_xref="CDD:427506"
     misc_feature    811..927
                     /gene="LOC101300202"
                     /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920"
                     /db_xref="CDD:428673"
     exon            1..345
                     /gene="LOC101300202"
                     /inference="alignment:Splign:2.0.8"
     exon            346..598
                     /gene="LOC101300202"
                     /inference="alignment:Splign:2.0.8"
     exon            599..843
                     /gene="LOC101300202"
                     /inference="alignment:Splign:2.0.8"
     exon            844..1083
                     /gene="LOC101300202"
                     /inference="alignment:Splign:2.0.8"
ORIGIN      

atggagagtgagagatggtctagggttccgaaaggtagagagacagagaagatggagagtgggatgggtaagagcaattattactatagtcatggtgtgatgggatcagctgggtcttcttctgggatgttgatgcctcctcctcttgtgaattcttatgctgctgctgctgcagatcagactagtagttctagtaaccatcagcactgctttgtttctctgccttttaccaacattaatccaaaccaaaatggtagtcaggaatatgagatgagaatgaaaactaaggtcatgagtcatcctctcttccctcgcctcttggcctcttatgtcaattgtcaaaaggttggggctcctgctgaagtggtggctaggttagaggatgcggctgcggcctcaatatcttcttcggctgctctttctgcagcatgtgaagaatcagaaccagacccagagctggatcagttcatggaggcctattgtgagatgcttaccaagtaccatgaagagcttacaaaacccttccatgaagccatgcttggcctctctaaaatcaactcccagctcaaagctctgtccgtttcaccatcatattctgctagtactggtgatcttgttggacaaggtggctcttcagaagaggctggtgtgaatgaaaattgcatagatccaagagccaaagattgggatattagagctaagcttctgcaaaagtacggtggatctcttggcagtctcagccaggagttaaagaagaagaagaagaacggaaagttgcccaaggaagcccgggttcagttgcaagaatggtggagcagaaattacacatggccctatccatcggagcctcaaaagctagccctagcagcatctacaggtctgactgtgaagcagataaacaactggttcataaaccaaaggaaacgccattggaaaccgtctgcggagggtatgcaacttgctatggtggatcattccttccaaaaaatggtggatcatccccaattcttctacaattatatggaccatctcatatgtaatccatcacctatggattgcacgtctactcctatggtcgactga

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