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2024-03-29 19:15:17, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       NM_001161638             954 bp    mRNA    linear   MAM 19-FEB-2022
DEFINITION  Sus scrofa claudin 2 (CLDN2), mRNA.
ACCESSION   NM_001161638
VERSION     NM_001161638.1
KEYWORDS    RefSeq.
SOURCE      Sus scrofa (pig)
  ORGANISM  Sus scrofa
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae;
            Sus.
REFERENCE   1  (bases 1 to 954)
  AUTHORS   Uenishi H, Eguchi T, Suzuki K, Sawazaki T, Toki D, Shinkai H,
            Okumura N, Hamasima N and Awata T.
  TITLE     PEDE (Pig EST Data Explorer): construction of a database for ESTs
            derived from porcine full-length cDNA libraries
  JOURNAL   Nucleic Acids Res. 32 (Database issue), D484-D488 (2004)
   PUBMED   14681463
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from FJ873110.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: FJ873110.1, SRR5120059.471551.1
                                        [ECO:0000345]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..954
                     /organism="Sus scrofa"
                     /mol_type="mRNA"
                     /db_xref="taxon:9823"
                     /chromosome="X"
                     /map="X"
     gene            1..954
                     /gene="CLDN2"
                     /note="claudin 2"
                     /db_xref="GeneID:733684"
                     /db_xref="VGNC:VGNC:86737"
     exon            1..954
                     /gene="CLDN2"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    52..54
                     /gene="CLDN2"
                     /note="upstream in-frame stop codon"
     CDS             136..828
                     /gene="CLDN2"
                     /codon_start=1
                     /product="claudin-2"
                     /protein_id="NP_001155110.1"
                     /db_xref="GeneID:733684"
                     /db_xref="VGNC:VGNC:86737"
                     /translation="
MASLGLQLVGYILGLLGLLGTLVAMLLPSWRTSSYVGASIVTAVGFSKGLWMECATHSTGITQCDIYSTMLGLPADIQAAQAMMVTSSAISSLACIITVVGMRCTVFCQNSRAKDRVAVVGGVFFLLGGLLGFIPVAWNLHGILRDFYSPLVPDSMKFEIGEALYLGIISSLFSLIAGIILCFSCPLQGNRSNYYDAYQAQPLATRSSPRPGQPPKAKSEFNSYSLTGYV"
     misc_feature    202..678
                     /gene="CLDN2"
                     /note="PMP-22/EMP/MP20/Claudin family; Region:
                     PMP22_Claudin; cl21598"
                     /db_xref="CDD:451326"
ORIGIN      
ttgtaaggaggcgagaggtcggcctggcggagacactgtgcaatgagggattagaggccaggatccaaggagcaagtgctacagccgggagacgagggaacgggccctgaagacgcatctacggagaggtcggccatggcctctctcggcctccaacttgtaggctacatcctgggccttctggggctcttgggcaccctggttgccatgctgctccccagctggcgaacgagttcttacgtcggggccagcatcgtgacggcagtcggcttctccaagggcctctggatggagtgtgccacgcacagcactggcatcacccagtgtgacatctacagcaccatgctgggcctgcctgctgacatccaggctgcccaggccatgatggtgacatctagcgccatctcctcgttggcctgtatcatcaccgtggtgggcatgcggtgcaccgtcttctgccagaactctcgcgccaaagacagagtggcggtggtgggtggagtcttcttcctccttggaggcctcctgggcttcatccccgttgcgtggaatcttcatgggatcctgcgggacttctactcccccctggtgcctgacagcatgaaatttgagatcggagaggctctctacttgggcatcatttcctccctgttctccctgatagctgggatcatcctctgcttttcctgcccactgcaaggaaatcgctccaactactacgatgcctatcaggcccagcccctcgccacccggagctctccgaggcctggtcaaccacccaaagccaagagtgagtttaactcctacagcctgacagggtatgtgtgaagacccaggggccagcgctggcggttggggggggctgggtctgtgagagccagtggacagccttcccccagggccacaggtgagggacattgccactggattgcgccagaaggtgctgctgaggat
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]