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2024-04-20 07:02:47, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       NM_001142750            1032 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus TGFB-induced factor homeobox 2-like, X-linked 2
            (Tgif2lx2), mRNA.
ACCESSION   NM_001142750 XM_001472895
VERSION     NM_001142750.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1032)
  AUTHORS   Lai YL, Li H, Chiang HS and Hsieh-Li HM.
  TITLE     Expression of a novel TGIF subclass homeobox gene, Tex1, in the
            spermatids of mouse testis during spermatogenesis
  JOURNAL   Mech Dev 113 (2), 185-187 (2002)
   PUBMED   11960710
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AC123953.4.
            
            On Dec 19, 2008 this sequence version replaced XM_001472895.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR5189673.76916.1, SRR5189670.166940.1
                                        [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1032              AC123953.4         89572-90603
FEATURES             Location/Qualifiers
     source          1..1032
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 49.58 cM"
     gene            1..1032
                     /gene="Tgif2lx2"
                     /note="TGFB-induced factor homeobox 2-like, X-linked 2"
                     /db_xref="GeneID:100039551"
                     /db_xref="MGI:MGI:3800824"
     exon            1..1032
                     /gene="Tgif2lx2"
                     /inference="alignment:Splign:2.1.0"
     CDS             116..811
                     /gene="Tgif2lx2"
                     /codon_start=1
                     /product="TGFB-induced factor homeobox 2-like, X-linked 2"
                     /protein_id="NP_001136222.1"
                     /db_xref="CCDS:CCDS53177.1"
                     /db_xref="GeneID:100039551"
                     /db_xref="MGI:MGI:3800824"
                     /translation="
MEEAEGSPEETQDFMKYYSSFGIRLERTCKMKFHDSRELPRGNMLPLKSVKILRDWLCEHQFNAYPTVADKRMLSKNTDLSYLQVSNWFVNIRKHLRWEIRYKPYSLSHEGQAANAAQKQHSNPSEEVKTQFNENADMQDLPLPIRQDSEEKVPYLESSPNQKVIAEDNIEKEEKISITEPWSSPEVAWPEEKPDFSSFYMLVDVAVQKAKEMEEQKKQNPNPQGPQQQFM"
     misc_feature    290..397
                     /gene="Tgif2lx2"
                     /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920"
                     /db_xref="CDD:428673"
ORIGIN      
agatgagaatccaattcagacagcagtgaaagtcttccctgactctctctgggcagctttagtcctacttcgttcatccctggtttctaagccactgaaagcagtcttccagaacatggaggaggctgaaggtagtccggaagaaacccaggactttatgaaatactacagctctttcgggataagacttgagagaacctgtaagatgaagtttcatgacagtcgggagcttccgagaggaaacatgttgccattgaagtctgtgaagatcctccgtgactggctctgtgagcaccagtttaacgcctaccctactgtagcagacaaacgaatgctgtccaagaataccgatttatcttacctgcaggtatccaactggtttgtaaatatccgcaaacaccttcgctgggaaattcgttacaaaccatacagcttgagtcacgaaggccaggctgccaatgcagcccagaagcagcactccaatccatccgaggaggtcaagacacagtttaacgaaaacgccgatatgcaggatctgcccctgccaatacgtcaagattccgaagagaaagtgccatatctggagtcttctccaaaccagaaggttatcgctgaagacaacatagagaaagaagagaagatttcaatcactgagccttggtcttctcctgaagttgcatggccagaggaaaagcctgattttagcagcttctacatgttggttgatgttgctgtacagaaggcaaaagaaatggaggagcagaagaagcaaaaccccaacccacagggtccccaacaacagttcatgtagccagttctttgaactctgggaggttcatttatactcaacctgattagcttgtaatgccgtcttctgctccatattattctcctttagaagtcttttccatcaatgttttctgaagaaagttactatccatgatattcaactttaacaaattgctaactttattctcctcccctggactttagccctatatatttattattaaacatcatgcaagctacaga
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]