2024-03-28 18:17:56, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001089974 2388 bp mRNA linear VRT 24-MAY-2021 DEFINITION Xenopus laevis claudin 18 L homeolog (cldn18.L), mRNA. ACCESSION NM_001089974 NM_001089975 VERSION NM_001089974.1 KEYWORDS RefSeq. SOURCE Xenopus laevis (African clawed frog) ORGANISM Xenopus laevis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus. REFERENCE 1 (bases 1 to 2388) AUTHORS Klein SL, Strausberg RL, Wagner L, Pontius J, Clifton SW and Richardson P. TITLE Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative JOURNAL Dev. Dyn. 225 (4), 384-391 (2002) PUBMED 12454917 COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC060425.1. On Jul 25, 2007 this sequence version replaced NM_001089975.1. ##Evidence-Data-START## Transcript exon combination :: BC060425.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMN13737719 [ECO:0000348] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..2388 /organism="Xenopus laevis" /mol_type="mRNA" /db_xref="taxon:8355" /chromosome="5L" gene 1..2388 /gene="cldn18.L" /gene_synonym="claudin-18; cldn18" /note="claudin 18 L homeolog" /db_xref="GeneID:398928" /db_xref="Xenbase:XB-GENE-991174" CDS 84..866 /gene="cldn18.L" /gene_synonym="claudin-18; cldn18" /codon_start=1 /product="claudin 18 L homeolog" /protein_id="NP_001083443.1" /db_xref="GeneID:398928" /db_xref="Xenbase:XB-GENE-991174" /translation="
MSVTMCQTMGFLVSALGFAGIIAATALDPWSTQDLYDNPVTAVFQYQGLWKSCVQQSSGFTECRPYYTILGLPAMFQAVRALMIVGIVLGAIGLLVAIFSLKCIRIGNMEDSAKANITLTSGIMFILAGLCSIIGVSVFANMLITNFWMTTANMYTGGAISGMGGMGGLQTLQTRYTFGAALFVGWVAGGLTLIGGVMMCIACRGLMPEESNYKAVSYHVSTKTPGYKTSAYEDKSKKSIYNESRRSEDGKSYPSKYDYV"
misc_feature 102..677 /gene="cldn18.L" /gene_synonym="claudin-18; cldn18" /note="PMP-22/EMP/MP20/Claudin family; Region: PMP22_Claudin; cl21598" /db_xref="CDD:451326" misc_feature 102..677 /gene="cldn18.L" /gene_synonym="claudin-18; cldn18" /note="PMP22_Claudin; Region: PMP-22/EMP/MP20/Claudin family" ORIGIN
gtgatagctgtccttgtgaatggtactcctgtaagtcaaaagaaggaaggaaattgtgcttggacactacacaactcgccaccatgtcggtaacaatgtgtcaaaccatgggctttcttgtatcagccctgggctttgctgggattatagcagcaactgctttggatccatggagcacgcaagatttatacgataatccagttactgctgtgttccagtaccagggactctggaagagttgtgtccaacagagttccggattcaccgagtgtcgaccctactacactatccttgggttaccagctatgttccaggcagtcagagccctgatgattgtgggcatagtgttgggagccattggcttacttgtggccattttttccctgaagtgtattcgcattggtaacatggaggattctgccaaggccaacattaccttgacatctggtatcatgttcattctggcaggactctgttcaataatcggagtatctgtctttgccaacatgttgattacaaacttctggatgactacagctaatatgtacacaggtggtgctatcagtggaatgggaggaatgggcggattgcagactctacaaacaagatatacttttggggcagccctttttgttggatgggtcgctggaggcttgacgttgattggaggtgttatgatgtgcatagcatgccgtggactcatgccagaagaaagcaactacaaggcagtttcctaccatgtttccacaaaaaccccaggctacaagacatccgcctacgaggataagagtaaaaaatccatttacaacgaatccagacgcagcgaggatgggaagagctacccttcaaaatatgattatgtgtagccgcttaagtacctggcatctacctacagttatatacagttgtactgtttattataaggggatggctgtattaatcagtgcaacccatcaagataatttattgctaatcagcaacatggtacagctaatgagtaagtttgttaacctgcatctcatggctaagcactgtttattaagccaaatcctttttttttttttttgttttatagtatattttaaaatgatttttacataaatctgtttgtatctatacacttatagtttagcttatagttatgtttatagttaaagttgctttttaaagatataatagccaaacatttctaaaaatgtaaccaagggactacaaccgaaccctgtgctgctgctctattggtttccaggccgatacaaggttctgtctgtgttttgggctgggaacatttttcttgagcagtgcctcctctttgggcaggcccttggagattaaactgctgatgtatttctatgataaggattagttacacatggacaggacctttctaaaatggcctcttagatgttacctacaaagtagtgcagtaagccaaagcaaccataagtctatatatactaggtaattgttgctggttcctagagaccattgcaatgatccaaaattgtacttatatcagtatatatatatatatatatatatatatatatagacctccacgcatagatatgttgagctttgtttatccatttccagttattttgttatcaactgtaatttgttaaaactaatcttgtatatagaacaatacccaacaccttatagggtttctactgagatatgagcatctggctgtctatagtaaagaaacctgagtgccaacaatgctctgacctcaggatgtgttcctttgatccatgtagtatcctggcatgatgctctgcggttagaatcaaatactaaggttattacatgatatgagattttactatctcctccgttacaacatctttattcctggaaacttttctttcttgtgagagatttccaagtccataaaaagttctaagtacgccatcggaaaacttccttcgcagctggtcggccctataaacatggaaatgttgcaataccattttgtgagaaggaaagggaattttaagagctttcaagagtctttcaaagtgtattgagtgaagcaattgctattcatagggattatgcatttcacgtccgagcgaattccttttctggcgctgtatctgcaaacggctcaccgatatttcgacaaagttataaaatacataaatcttgggtttttacaccagagttctataatgccgcacactaaagaaagatagaagcattgagaaaacatttctattgcattttgaaggctgaacgcaggcctttcccgagttttattgtcgccaacaatcactgaggtacagcggtttaagggtctatggaatattacatctattcaatttgcaattctgctcttcttctgtaaataaagatggatttcatttaaaaaaaaaaaaaaaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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