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2020-11-27 02:48:48, GGRNA : RefSeq release 202 (Sep, 2020)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Xenopus laevis argonaute 4, RISC catalytic component L homeolog (ago4.L), mRNA. (4129 bp)
mixed/partial sample support SAMN02777034, SAMN02851412 [ECO:0000350] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..4129 /organism="Xenopus laevis" /mol_type="mRNA" /db_xref="taxon:8355" /chromosome="2L" /map="2L" gene 1..4129 /gene="ago4.L" /gene_synonym="ago4; argonaute-4; Argonaute4; eif2c4" /note="argonaute 4, RISC catalytic component L homeolog" /db_xref="GeneID:734630" /db_xref="Xenbase:XB-GENE-1006885" CDS 21..2675 /gene="ago4.L" /gene_synonym="ago4; argonaute-4; Argonaute4; eif2c4" /note="argonaute RISC catalytic component 4" /codon_start=1 /product="protein argonaute...
Synonym: ago4; argonaute-4; Argonaute4; eif2c4
NM_001096105.1 - Xenopus laevis (African clawed frog) - NCBI
Xenopus tropicalis argonaute 2, RISC catalytic component (ago2), mRNA. (3687 bp)
single sample supports all introns SAMD00028290, SAMD00028291 [ECO:0000348] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..3687 /organism="Xenopus tropicalis" /mol_type="mRNA" /db_xref="taxon:8364" /chromosome="6" /map="6" gene 1..3687 /gene="ago2" /gene_synonym="Argonaute2; eif2c2" /note="argonaute 2, RISC catalytic component" /db_xref="GeneID:448205" /db_xref="Xenbase:XB-GENE-1001916" exon 1..260 /gene="ago2" /gene_synonym="Argonaute2; eif2c2" /inference="alignment:Splign:2.1.0" misc_feature 122..124 /gene="ago2" /gene_synonym="Argonaute2; eif2c2" /note="upstream in-frame stop...
Synonym: Argonaute2; eif2c2
NM_001004877.1 - Xenopus tropicalis (tropical clawed frog) - NCBI
Xenopus laevis argonaute 2, RISC catalytic component L homeolog (ago2.L), mRNA. (3298 bp)
sample support SAMD00012418, SAMD00012419 [ECO:0000350] ##Evidence-Data-END## FEATURES Location/Qualifiers source 1..3298 /organism="Xenopus laevis" /mol_type="mRNA" /db_xref="taxon:8355" /chromosome="6L" /map="6L" gene 1..3298 /gene="ago2.L" /gene_synonym="ago2; ago2.S; Argonaute2; eif2c1; eif2c2" /note="argonaute 2, RISC catalytic component L homeolog" /db_xref="GeneID:446823" /db_xref="Xenbase:XB-GENE-1001922" misc_feature 140..142 /gene="ago2.L" /gene_synonym="ago2; ago2.S; Argonaute2; eif2c1; eif2c2" /note="upstream in-frame stop codon" CDS 263..2851 /gene="ago2.L" /gene_synonym="ago2;...
Synonym: ago2; ago2.S; Argonaute2; eif2c1; eif2c2
NM_001093519.1 - Xenopus laevis (African clawed frog) - NCBI
Danio rerio argonaute RISC catalytic component 3b (ago3b), mRNA. (3062 bp)
c 2954-3062 BX005424.10 157442-157550 c FEATURES Location/Qualifiers source 1..3062 /organism="Danio rerio" /mol_type="mRNA" /strain="Tuebingen" /db_xref="taxon:7955" /chromosome="19" /map="19" gene 1..3062 /gene="ago3b" /gene_synonym="Ago; ago3; Argonaute3; eif2c; eif2c3; eif2c3b; sb:eu33; sb:eu332; si:dkey-3n22.3" /note="argonaute RISC catalytic component 3b" /db_xref="GeneID:568159" /db_xref="ZFIN:ZDB-GENE-060503-452" exon 1..498 /gene="ago3b" /gene_synonym="Ago; ago3; Argonaute3; eif2c; eif2c3; eif2c3b; sb:eu33; sb:eu332; si:dkey-3n22.3" /inference="alignment:Splign:2.1.0" misc_feature...
Synonym: Ago; ago3; Argonaute3; eif2c; eif2c3; eif2c3b; sb:eu33; sb:eu332; si:dkey-3n22.3
NM_001160028.1 - Danio rerio (zebrafish) - NCBI - UCSC
Zea mays uncharacterized LOC100382704 (LOC100382704), mRNA. (3115 bp)
LPUQ01001382.1 884682-884847 1869-1937 LPUQ01001382.1 884921-884989 1938-3115 BT065090.1 1-1178 FEATURES Location/Qualifiers source 1..3115 /organism="Zea mays" /mol_type="mRNA" /cultivar="B73" /db_xref="taxon:4577" /chromosome="7" /map="7" gene 1..3115 /gene="LOC100382704" /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075" /note="uncharacterized LOC100382704" /db_xref="GeneID:100382704" exon 1..215 /gene="LOC100382704" /gene_synonym="argonaute6; GRMZM2G347402; GRMZM2G432075" /inference="alignment:Splign:2.1.0" misc_feature 203..205 /gene="LOC100382704" /gene_synonym="argonaute6;...
Synonym: argonaute6; GRMZM2G347402; GRMZM2G432075
NM_001361678.1 - Zea mays - NCBI
Zea mays uncharacterized LOC100193970 (LOC100193970), mRNA. (3594 bp)
LPUQ01000717.1 629512-629634 2217-2270 LPUQ01000717.1 629722-629775 2271-3594 BT036371.1 1-1324 FEATURES Location/Qualifiers source 1..3594 /organism="Zea mays" /mol_type="mRNA" /cultivar="B73" /db_xref="taxon:4577" /chromosome="8" /map="8" gene 1..3594 /gene="LOC100193970" /gene_synonym="argonaute1; GRMZM2G162525" /note="uncharacterized LOC100193970" /db_xref="GeneID:100193970" exon 1..116 /gene="LOC100193970" /gene_synonym="argonaute1; GRMZM2G162525" /inference="alignment:Splign:2.1.0" misc_feature 75..77 /gene="LOC100193970" /gene_synonym="argonaute1; GRMZM2G162525" /note="upstream in-frame...
Synonym: argonaute1; GRMZM2G162525
NM_001350108.1 - Zea mays - NCBI
PREDICTED: Xenopus tropicalis argonaute 2, RISC catalytic component (ago2), transcript variant X1, mRNA. (5660 bp)
END## FEATURES Location/Qualifiers source 1..5660 /organism="Xenopus tropicalis" /mol_type="mRNA" /strain="Nigerian" /db_xref="taxon:8364" /chromosome="6" /sex="female" /tissue_type="liver and blood" /dev_stage="adult" /note="F17 inbred" gene 1..5660 /gene="ago2" /gene_synonym="Argonaute2; eif2c2" /note="argonaute 2, RISC catalytic component; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 68 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 102 samples with...
Synonym: Argonaute2; eif2c2
XM_012964517.3 - Xenopus tropicalis (tropical clawed frog) - NCBI
Sus scrofa argonaute RISC catalytic component 2 (AGO2), mRNA. (2583 bp)
misc_feature 76..2577 /gene="AGO2" /gene_synonym="EIF2C2" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 85..501 /gene="AGO2" /gene_synonym="EIF2C2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 532..681 /gene="AGO2" /gene_synonym="EIF2C2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 682..1044 /gene="AGO2" /gene_synonym="EIF2C2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an...
Synonym: EIF2C2
NM_001194975.1 - Sus scrofa (pig) - NCBI
PREDICTED: Aplysia californica protein argonaute-1 (LOC101846762), mRNA. (4660 bp)
misc_feature 248..2356 /gene="LOC101846762" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 353..769 /gene="LOC101846762" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 800..949 /gene="LOC101846762" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 950..1312 /gene="LOC101846762" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference...
XM_013087288.2 - Aplysia californica (California sea hare) - NCBI
PREDICTED: Zea mays protein argonaute PNH1 (LOC103629795), transcript variant X2, mRNA. (3884 bp)
misc_feature 930..3347 /gene="LOC103629795" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 993..1424 /gene="LOC103629795" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 1455..1604 /gene="LOC103629795" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1605..1949 /gene="LOC103629795" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_008650906.4 - Zea mays - NCBI
PREDICTED: Pan paniscus argonaute RISC component 4 (AGO4), transcript variant X1, mRNA. (5549 bp)
misc_feature 80..2617 /gene="AGO4" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 89..502 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 536..685 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 686..1048 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been...
XM_008965040.3 - Pan paniscus (pygmy chimpanzee) - NCBI
Tribolium castaneum Argonaute-2a (Ago-2a), mRNA. (2571 bp)
misc_feature 148..2454 /gene="Ago-2a" /gene_synonym="Ago2A" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 148..534 /gene="Ago-2a" /gene_synonym="Ago2A" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 565..717 /gene="Ago-2a" /gene_synonym="Ago2A" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 718..1083 /gene="Ago-2a" /gene_synonym="Ago2A" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and...
Synonym: Ago2A
NM_001114370.1 - Tribolium castaneum (red flour beetle) - NCBI
PREDICTED: Crassostrea gigas protein argonaute-2 (LOC105321320), transcript variant X5, mRNA. (5852 bp)
misc_feature 274..2637 /gene="LOC105321320" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 274..690 /gene="LOC105321320" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 721..870 /gene="LOC105321320" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 871..1233 /gene="LOC105321320" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference...
XM_011419586.3 - Crassostrea gigas (Pacific oyster) - NCBI
PREDICTED: Crassostrea gigas protein argonaute-2 (LOC105321320), transcript variant X4, mRNA. (5864 bp)
misc_feature 286..2649 /gene="LOC105321320" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 286..702 /gene="LOC105321320" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 733..882 /gene="LOC105321320" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 883..1245 /gene="LOC105321320" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference...
XM_011419585.3 - Crassostrea gigas (Pacific oyster) - NCBI
PREDICTED: Ailuropoda melanoleuca argonaute RISC catalytic component 2 (AGO2), transcript variant X2, mRNA. (14547 bp)
misc_feature 262..2694 /gene="AGO2" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 271..687 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 718..867 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 868..1230 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been...
XM_011226774.3 - Ailuropoda melanoleuca (giant panda) - NCBI
PREDICTED: Crassostrea gigas protein argonaute-2 (LOC105321320), transcript variant X3, mRNA. (5950 bp)
misc_feature 387..2735 /gene="LOC105321320" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 387..803 /gene="LOC105321320" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 834..983 /gene="LOC105321320" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 984..1346 /gene="LOC105321320" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference...
XM_011419584.3 - Crassostrea gigas (Pacific oyster) - NCBI
PREDICTED: Crassostrea gigas protein argonaute-2 (LOC105321320), transcript variant X2, mRNA. (5953 bp)
misc_feature 375..2738 /gene="LOC105321320" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 375..791 /gene="LOC105321320" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 822..971 /gene="LOC105321320" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 972..1334 /gene="LOC105321320" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference...
XM_011419583.3 - Crassostrea gigas (Pacific oyster) - NCBI
PREDICTED: Crassostrea gigas protein argonaute-2 (LOC105321320), transcript variant X1, mRNA. (5965 bp)
misc_feature 387..2750 /gene="LOC105321320" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 387..803 /gene="LOC105321320" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 834..983 /gene="LOC105321320" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 984..1346 /gene="LOC105321320" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference...
XM_011419582.3 - Crassostrea gigas (Pacific oyster) - NCBI
PREDICTED: Cricetulus griseus protein argonaute-3 (LOC100769090), transcript variant X1, mRNA. (3850 bp)
misc_feature 246..2765 /gene="LOC100769090" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 246..689 /gene="LOC100769090" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 720..869 /gene="LOC100769090" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 870..1232 /gene="LOC100769090" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference...
XM_003500893.4 - Cricetulus griseus (Chinese hamster) - NCBI
PREDICTED: Neolamprologus brichardi argonaute RISC catalytic component 3b (ago3b), transcript variant X2, mRNA. (7033 bp)
misc_feature 358..2898 /gene="ago3b" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 358..801 /gene="ago3b" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 832..981 /gene="ago3b" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 982..1344 /gene="ago3b" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has...
XM_006794389.1 - Neolamprologus brichardi - NCBI
PREDICTED: Esox lucius argonaute RISC component 1 (ago1), transcript variant X9, mRNA. (5447 bp)
misc_feature 447..3011 /gene="ago1" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 519..935 /gene="ago1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 966..1115 /gene="ago1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1116..1478 /gene="ago1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has...
XM_010901063.4 - Esox lucius (northern pike) - NCBI
PREDICTED: Esox lucius argonaute RISC component 1 (ago1), transcript variant X8, mRNA. (5449 bp)
misc_feature 446..3013 /gene="ago1" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 518..934 /gene="ago1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 965..1114 /gene="ago1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1115..1477 /gene="ago1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has...
XM_010901061.5 - Esox lucius (northern pike) - NCBI
PREDICTED: Crassostrea gigas protein argonaute-2 (LOC105329532), transcript variant X3, mRNA. (4102 bp)
misc_feature 453..2801 /gene="LOC105329532" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 453..869 /gene="LOC105329532" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 900..1049 /gene="LOC105329532" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1050..1412 /gene="LOC105329532" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_011430814.3 - Crassostrea gigas (Pacific oyster) - NCBI
PREDICTED: Esox lucius argonaute RISC component 1 (ago1), transcript variant X7, mRNA. (5477 bp)
misc_feature 447..3041 /gene="ago1" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 519..935 /gene="ago1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 966..1115 /gene="ago1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1116..1478 /gene="ago1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has...
XM_010901060.5 - Esox lucius (northern pike) - NCBI
PREDICTED: Esox lucius argonaute RISC component 1 (ago1), transcript variant X6, mRNA. (5480 bp)
misc_feature 447..3044 /gene="ago1" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 519..935 /gene="ago1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 966..1115 /gene="ago1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1116..1478 /gene="ago1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has...
XM_010901059.4 - Esox lucius (northern pike) - NCBI
PREDICTED: Esox lucius argonaute RISC component 1 (ago1), transcript variant X5, mRNA. (5483 bp)
misc_feature 447..3047 /gene="ago1" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 519..935 /gene="ago1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 966..1115 /gene="ago1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1116..1514 /gene="ago1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has...
XM_010901058.4 - Esox lucius (northern pike) - NCBI
PREDICTED: Esox lucius argonaute RISC component 1 (ago1), transcript variant X4, mRNA. (5485 bp)
misc_feature 446..3049 /gene="ago1" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 518..934 /gene="ago1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 965..1114 /gene="ago1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1115..1513 /gene="ago1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has...
XM_010901057.5 - Esox lucius (northern pike) - NCBI
PREDICTED: Esox lucius argonaute RISC component 1 (ago1), transcript variant X3, mRNA. (5495 bp)
misc_feature 447..3059 /gene="ago1" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 519..935 /gene="ago1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 966..1115 /gene="ago1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1116..1493 /gene="ago1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has...
XM_010901056.4 - Esox lucius (northern pike) - NCBI
PREDICTED: Crassostrea gigas protein argonaute-2 (LOC105329532), transcript variant X1, mRNA. (4138 bp)
misc_feature 489..2837 /gene="LOC105329532" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 489..905 /gene="LOC105329532" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 936..1085 /gene="LOC105329532" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1086..1448 /gene="LOC105329532" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_011430813.3 - Crassostrea gigas (Pacific oyster) - NCBI
PREDICTED: Esox lucius argonaute RISC component 1 (ago1), transcript variant X2, mRNA. (5513 bp)
misc_feature 447..3077 /gene="ago1" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 519..935 /gene="ago1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 966..1115 /gene="ago1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1116..1514 /gene="ago1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has...
XM_010901055.5 - Esox lucius (northern pike) - NCBI
PREDICTED: Esox lucius argonaute RISC component 1 (ago1), transcript variant X1, mRNA. (5516 bp)
misc_feature 447..3080 /gene="ago1" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 519..935 /gene="ago1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 966..1115 /gene="ago1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1116..1514 /gene="ago1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has...
XM_010901054.4 - Esox lucius (northern pike) - NCBI
Sus scrofa argonaute RISC catalytic component 3 (AGO3), mRNA. (2583 bp)
misc_feature 22..2577 /gene="AGO3" /gene_synonym="EIF2C3" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 58..501 /gene="AGO3" /gene_synonym="EIF2C3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 532..681 /gene="AGO3" /gene_synonym="EIF2C3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 682..1044 /gene="AGO3" /gene_synonym="EIF2C3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an...
Synonym: EIF2C3
NM_001194974.1 - Sus scrofa (pig) - NCBI
PREDICTED: Aplysia californica protein argonaute-2 (LOC101863465), transcript variant X6, mRNA. (3766 bp)
misc_feature 265..2715 /gene="LOC101863465" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 367..783 /gene="LOC101863465" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 814..963 /gene="LOC101863465" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 964..1326 /gene="LOC101863465" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference...
XM_013087614.2 - Aplysia californica (California sea hare) - NCBI
Tribolium castaneum Argonaute-2b (Ago-2b), mRNA. (2775 bp)
misc_feature 100..2568 /gene="Ago-2b" /gene_synonym="Ago2B" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 208..594 /gene="Ago-2b" /gene_synonym="Ago2B" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 625..774 /gene="Ago-2b" /gene_synonym="Ago2B" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 775..1146 /gene="Ago-2b" /gene_synonym="Ago2B" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and...
Synonym: Ago2B
NM_001114356.1 - Tribolium castaneum (red flour beetle) - NCBI
Phytophthora infestans T30-4 Argonaute5 (AGO5) (PITG_01444) mRNA, complete cds. (2496 bp)
misc_feature <103..459 /locus_tag="PITG_01444" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 124..2490 /locus_tag="PITG_01444" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 493..633 /locus_tag="PITG_01444" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 637..981 /locus_tag="PITG_01444" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_002908063.1 - Phytophthora infestans T30-4 - NCBI
PREDICTED: Cricetulus griseus protein argonaute-1 (LOC100768807), transcript variant X2, mRNA. (2541 bp)
misc_feature 235..459 /gene="LOC100768807" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:339747" misc_feature 493..639 /gene="LOC100768807" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:337161" misc_feature 640..1002 /gene="LOC100768807" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_016974868.3 - Cricetulus griseus (Chinese hamster) - NCBI
PREDICTED: Aplysia californica protein argonaute-2 (LOC101863465), transcript variant X5, mRNA. (3790 bp)
misc_feature 307..2757 /gene="LOC101863465" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 409..825 /gene="LOC101863465" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 856..1005 /gene="LOC101863465" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1006..1368 /gene="LOC101863465" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_005107532.3 - Aplysia californica (California sea hare) - NCBI
PREDICTED: Aplysia californica protein argonaute-2 (LOC101863465), transcript variant X4, mRNA. (3790 bp)
misc_feature 307..2757 /gene="LOC101863465" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 409..825 /gene="LOC101863465" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 856..1005 /gene="LOC101863465" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1006..1368 /gene="LOC101863465" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_005107531.3 - Aplysia californica (California sea hare) - NCBI
PREDICTED: Aplysia californica protein argonaute-2 (LOC101863465), transcript variant X3, mRNA. (3802 bp)
misc_feature 307..2757 /gene="LOC101863465" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 409..825 /gene="LOC101863465" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 856..1005 /gene="LOC101863465" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1006..1368 /gene="LOC101863465" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_013087613.2 - Aplysia californica (California sea hare) - NCBI
PREDICTED: Aplysia californica protein argonaute-2 (LOC101863465), transcript variant X1, mRNA. (3808 bp)
misc_feature 307..2757 /gene="LOC101863465" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 409..825 /gene="LOC101863465" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 856..1005 /gene="LOC101863465" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1006..1368 /gene="LOC101863465" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_005107529.3 - Aplysia californica (California sea hare) - NCBI
PREDICTED: Aplysia californica protein argonaute-2 (LOC101863465), transcript variant X2, mRNA. (3808 bp)
misc_feature 307..2757 /gene="LOC101863465" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 409..825 /gene="LOC101863465" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 856..1005 /gene="LOC101863465" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1006..1368 /gene="LOC101863465" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_005107530.3 - Aplysia californica (California sea hare) - NCBI
Phytophthora infestans T30-4 Argonaute4 (AGO4) (PITG_01443) mRNA, complete cds. (2580 bp)
misc_feature 100..2490 /locus_tag="PITG_01443" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 100..543 /locus_tag="PITG_01443" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 577..720 /locus_tag="PITG_01443" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 760..1065 /locus_tag="PITG_01443" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA...
XM_002908062.1 - Phytophthora infestans T30-4 - NCBI
Sus scrofa argonaute RISC component 4 (AGO4), mRNA. (2586 bp)
misc_feature 43..2580 /gene="AGO4" /gene_synonym="EIF2C4" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 52..465 /gene="AGO4" /gene_synonym="EIF2C4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 499..648 /gene="AGO4" /gene_synonym="EIF2C4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 649..1011 /gene="AGO4" /gene_synonym="EIF2C4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an...
Synonym: EIF2C4
NM_001194972.1 - Sus scrofa (pig) - NCBI
PREDICTED: Canis lupus dingo argonaute RISC catalytic component 2 (AGO2), transcript variant X3, mRNA. (14344 bp)
misc_feature 80..304 /gene="AGO2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 332..484 /gene="AGO2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 485..847 /gene="AGO2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_...
XM_025450841.2 - Canis lupus dingo (dingo) - NCBI
PREDICTED: Pan paniscus argonaute RISC component 4 (AGO4), transcript variant X4, mRNA. (5691 bp)
misc_feature 390..644 /gene="AGO4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:339747" misc_feature 681..827 /gene="AGO4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:337161" misc_feature 828..1190 /gene="AGO4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_008965041.3 - Pan paniscus (pygmy chimpanzee) - NCBI
Sus scrofa argonaute RISC component 1 (AGO1), mRNA. (2574 bp)
misc_feature 76..2568 /gene="AGO1" /gene_synonym="EIF2C1" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 76..492 /gene="AGO1" /gene_synonym="EIF2C1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 523..672 /gene="AGO1" /gene_synonym="EIF2C1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 673..1035 /gene="AGO1" /gene_synonym="EIF2C1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an...
Synonym: EIF2C1
NM_001194976.1 - Sus scrofa (pig) - NCBI
Rattus norvegicus argonaute RISC catalytic component 2 (Ago2), mRNA. (2626 bp)
misc_feature 28..2586 /gene="Ago2" /gene_synonym="Eif2c2" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 94..510 /gene="Ago2" /gene_synonym="Eif2c2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 541..690 /gene="Ago2" /gene_synonym="Eif2c2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 691..1053 /gene="Ago2" /gene_synonym="Eif2c2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an...
Synonym: Eif2c2
NM_021597.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Egretta garzetta argonaute RISC component 4 (LOC104123135), mRNA. (3708 bp)
misc_feature 190..444 /gene="LOC104123135" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:339747" misc_feature 481..627 /gene="LOC104123135" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:337161" misc_feature 628..990 /gene="LOC104123135" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /...
XM_009635352.2 - Egretta garzetta (little egret) - NCBI
PREDICTED: Neolamprologus brichardi argonaute RISC component 1 (ago1), mRNA. (5633 bp)
misc_feature 555..947 /gene="ago1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:318646" misc_feature 975..1127 /gene="ago1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:312283" misc_feature 1128..1490 /gene="ago1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212"...
XM_006791716.1 - Neolamprologus brichardi - NCBI
PREDICTED: Neolamprologus brichardi protein argonaute-3 (LOC102778312), mRNA. (11415 bp)
misc_feature 845..1288 /gene="LOC102778312" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:293095" misc_feature 1319..1468 /gene="LOC102778312" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:285861" misc_feature 1469..1831 /gene="LOC102778312" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like;...
XM_006791851.2 - Neolamprologus brichardi - NCBI

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : http://ggrna.dbcls.jp/en/Argonaute
lang : en | div : | spe : | query_string : Argonaute | format : html | download :

0.000 | 0.000 | search_start;
0.082 | 0.082 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?to=0&format=json
0.202 | 0.120 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.208 | 0.006 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]