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2024-11-23 18:28:17, GGRNA : RefSeq release 226 (Sep, 2024)

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Results:

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Danio rerio paralemmin 1b (palm1b), mRNA. (2142 bp)
E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W and Hertzano R. TITLE RFX transcription factors are essential for hearing in mice JOURNAL Nat Commun 6, 8549 (2015) PUBMED 26469318 REMARK Publication Status: Online-Only REFERENCE 3 (bases 1 to 2142) AUTHORS Aoki M, Segawa H, Naito M and Okamoto H. TITLE Identification of possible downstream genes required for the extension of peripheral axons in primary sensory neurons JOURNAL Biochem. Biophys. Res. Commun. 445 (2), 357-362 (2014) PUBMED 24513284 REFERENCE 4 (bases 1 to 2142) AUTHORS Konzer A, Ruhs A, Braun H, Jungblut B,...
Synonym: zgc:63523
NM_200601.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio tubulin polymerization-promoting protein family member 2 (tppp2), mRNA. (3088 bp)
REMARK Publication Status: Online-Only REFERENCE 4 (bases 1 to 3088) AUTHORS Orosz F. TITLE On the tubulin polymerization promoting proteins of zebrafish JOURNAL Biochem Biophys Res Commun 457 (3), 267-272 (2015) PUBMED 25576359 REFERENCE 5 (bases 1 to 3088) AUTHORS Aoki M, Segawa H, Naito M and Okamoto H. TITLE Identification of possible downstream genes required for the extension of peripheral axons in primary sensory neurons JOURNAL Biochem Biophys Res Commun 445 (2), 357-362 (2014) PUBMED 24513284...
NM_001326439.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio NELL2 interacting cell ontogeny regulator 1 (nicol1), mRNA. (1098 bp)
E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W and Hertzano R. TITLE RFX transcription factors are essential for hearing in mice JOURNAL Nat Commun 6, 8549 (2015) PUBMED 26469318 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 1098) AUTHORS Aoki M, Segawa H, Naito M and Okamoto H. TITLE Identification of possible downstream genes required for the extension of peripheral axons in primary sensory neurons JOURNAL Biochem Biophys Res Commun 445 (2), 357-362 (2014) PUBMED 24513284...
Synonym: fj40g07; si:dkeyp-75h12.5; wu:fj40g07
NM_001386636.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio taste receptor, type 1, member 3 (tas1r3), mRNA. (2553 bp)
Oike,H., Nagai,T., Furuyama,A., Okada,S., Aihara,Y., Ishimaru,Y., Marui,T., Matsumoto,I., Misaka,T. and Abe,K. TITLE Characterization of ligands for fish taste receptors JOURNAL J Neurosci 27 (21), 5584-5592 (2007) PUBMED 17522303 REFERENCE 9 (bases 1 to 2553) AUTHORS Ishimaru,Y., Okada,S., Naito,H., Nagai,T., Yasuoka,A., Matsumoto,I. and Abe,K. TITLE Two families of candidate taste receptors in fishes JOURNAL Mech Dev 122 (12), 1310-1321 (2005) PUBMED 16274966...
Synonym: t1rc1
NM_001039628.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio taste receptor, type 2, member 201, tandem duplicate 1 (tas2r201.1), mRNA. (942 bp)
of the SMBE Tri-National Young Investigators' Workshop 2005. Lineage-specific expansions and contractions of the bitter taste receptor gene repertoire in vertebrates JOURNAL Mol Biol Evol 23 (5), 964-972 (2006) PUBMED 16484289 REFERENCE 6 (bases 1 to 942) AUTHORS Ishimaru,Y., Okada,S., Naito,H., Nagai,T., Yasuoka,A., Matsumoto,I. and Abe,K. TITLE Two families of candidate taste receptors in fishes JOURNAL Mech Dev 122 (12), 1310-1321 (2005) PUBMED 16274966...
Synonym: T2R3a; tas2r2a
NM_001083864.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio serpin peptidase inhibitor, clade I (neuroserpin), member 1 (serpini1), mRNA. (1974 bp)
AUTHORS Kalka M, Markiewicz N, Ptak M, Sone ED, Ozyhar A, Dobryszycki P and Wojtas M. TITLE In vivo and in vitro analysis of starmaker activity in zebrafish otolith biomineralization JOURNAL FASEB J 33 (6), 6877-6886 (2019) PUBMED 30840836 REFERENCE 5 (bases 1 to 1974) AUTHORS Aoki M, Segawa H, Naito M and Okamoto H. TITLE Identification of possible downstream genes required for the extension of peripheral axons in primary sensory neurons JOURNAL Biochem Biophys Res Commun 445 (2), 357-362 (2014) PUBMED 24513284 REFERENCE 6 (bases 1 to 1974) AUTHORS Toro S, Wegner J, Muller M, Westerfield M...
Synonym: serpini1l; si:ch211-167c22.4
NM_001128692.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio neuritin 1a (nrn1a), mRNA. (659 bp)
Spaink,H.P., Levraud,J.P. and Boudinot,P. TITLE Contrasted innate responses to two viruses in zebrafish: insights into the ancestral repertoire of vertebrate IFN-stimulated genes JOURNAL J Immunol 192 (9), 4328-4341 (2014) PUBMED 24683187 REFERENCE 4 (bases 1 to 659) AUTHORS Aoki,M., Segawa,H., Naito,M. and Okamoto,H. TITLE Identification of possible downstream genes required for the extension of peripheral axons in primary sensory neurons JOURNAL Biochem Biophys Res Commun 445 (2), 357-362 (2014) PUBMED 24513284 REFERENCE 5 (bases 1 to 659) AUTHORS Akten,B., Kye,M.J., Hao le,T., Wertz,M.H.,...
Synonym: nrn1; zgc:92828
NM_001002507.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio taste receptor, type 2, member 200, tandem duplicate 1 (tas2r200.1), mRNA. (963 bp)
of the SMBE Tri-National Young Investigators' Workshop 2005. Lineage-specific expansions and contractions of the bitter taste receptor gene repertoire in vertebrates JOURNAL Mol Biol Evol 23 (5), 964-972 (2006) PUBMED 16484289 REFERENCE 5 (bases 1 to 963) AUTHORS Ishimaru,Y., Okada,S., Naito,H., Nagai,T., Yasuoka,A., Matsumoto,I. and Abe,K. TITLE Two families of candidate taste receptors in fishes JOURNAL Mech Dev 122 (12), 1310-1321 (2005) PUBMED 16274966...
Synonym: T2R5; tas2r1a
NM_001039830.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio taste receptor, type 2, member 202 (tas2r202), mRNA. (975 bp)
Oike,H., Nagai,T., Furuyama,A., Okada,S., Aihara,Y., Ishimaru,Y., Marui,T., Matsumoto,I., Misaka,T. and Abe,K. TITLE Characterization of ligands for fish taste receptors JOURNAL J Neurosci 27 (21), 5584-5592 (2007) PUBMED 17522303 REFERENCE 7 (bases 1 to 975) AUTHORS Ishimaru,Y., Okada,S., Naito,H., Nagai,T., Yasuoka,A., Matsumoto,I. and Abe,K. TITLE Two families of candidate taste receptors in fishes JOURNAL Mech Dev 122 (12), 1310-1321 (2005) PUBMED 16274966...
Synonym: drT2R1; tas2r5
NM_001100629.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio transmembrane protein 59-like (tmem59l), mRNA. (2667 bp)
E, Frolenkov GI, Strome SE, Durand B, Zaghloul NA, Jones SM, Reith W and Hertzano R. TITLE RFX transcription factors are essential for hearing in mice JOURNAL Nat Commun 6, 8549 (2015) PUBMED 26469318 REMARK Publication Status: Online-Only REFERENCE 4 (bases 1 to 2667) AUTHORS Aoki M, Segawa H, Naito M and Okamoto H. TITLE Identification of possible downstream genes required for the extension of peripheral axons in primary sensory neurons JOURNAL Biochem Biophys Res Commun 445 (2), 357-362 (2014) PUBMED 24513284...
Synonym: wu:fi68e12; zgc:63977
NM_213337.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio RNA binding fox-1 homolog 1 (rbfox1), mRNA. (1177 bp)
GeneRIF: This study underlines that tightly regulated splicing is necessary for unconstrained cardiac function and renders the splicing regulator rbfox1 an interesting target for investigation in human heart failure and cardiomyopathy. REFERENCE 7 (bases 1 to 1177) AUTHORS Aoki,M., Segawa,H., Naito,M. and Okamoto,H. TITLE Identification of possible downstream genes required for the extension of peripheral axons in primary sensory neurons JOURNAL Biochem Biophys Res Commun 445 (2), 357-362 (2014) PUBMED 24513284 REFERENCE 8 (bases 1 to 1177) AUTHORS Amir-Zilberstein,L., Blechman,J., Sztainberg,...
Synonym: a2bp1; fox1; zgc:103635
NM_001005596.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio taste receptor, type 2, member 203 (tas2r203), mRNA. (918 bp)
Proceedings of the SMBE Tri-National Young Investigators' Workshop 2005. Lineage-specific expansions and contractions of the bitter taste receptor gene repertoire in vertebrates JOURNAL Mol Biol Evol 23 (5), 964-972 (2006) PUBMED 16484289 REFERENCE 6 (bases 1 to 918) AUTHORS Ishimaru Y, Okada S, Naito H, Nagai T, Yasuoka A, Matsumoto I and Abe K. TITLE Two families of candidate taste receptors in fishes JOURNAL Mech Dev 122 (12), 1310-1321 (2005) PUBMED 16274966 REFERENCE 7 (bases 1 to 918) AUTHORS Pfister P and Rodriguez I. TITLE Olfactory expression of a single and highly variable V1r...
Synonym: T2R1; tas2r1l; tas2r4
NM_001020506.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio taste receptor, type 2, member 200, tandem duplicate 2 (tas2r200.2), mRNA. (963 bp)
Proceedings of the SMBE Tri-National Young Investigators' Workshop 2005. Lineage-specific expansions and contractions of the bitter taste receptor gene repertoire in vertebrates JOURNAL Mol Biol Evol 23 (5), 964-972 (2006) PUBMED 16484289 REFERENCE 5 (bases 1 to 963) AUTHORS Ishimaru Y, Okada S, Naito H, Nagai T, Yasuoka A, Matsumoto I and Abe K. TITLE Two families of candidate taste receptors in fishes JOURNAL Mech Dev 122 (12), 1310-1321 (2005) PUBMED 16274966 REFERENCE 6 (bases 1 to 963) AUTHORS Pfister P and Rodriguez I. TITLE Olfactory expression of a single and highly variable V1r...
Synonym: T2R2; TAS2R1b; tas2r2l
NM_001020505.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio neurofilament medium chain b (nefmb), mRNA. (2713 bp)
analyses of zebrafish miRNA and mRNA expression profiles identify miR-29b and miR-223 as potential regulators of optic nerve regeneration JOURNAL BMC Genomics 16 (1), 591 (2015) PUBMED 26265132 REMARK Publication Status: Online-Only REFERENCE 7 (bases 1 to 2713) AUTHORS Aoki M, Segawa H, Naito M and Okamoto H. TITLE Identification of possible downstream genes required for the extension of peripheral axons in primary sensory neurons JOURNAL Biochem Biophys Res Commun 445 (2), 357-362 (2014) PUBMED 24513284 REFERENCE 8 (bases 1 to 2713) AUTHORS Dee CT, Hirst CS, Shih YH, Tripathi VB, Patient RK...
Synonym: nefm; zgc:158491
NM_001123280.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio dorsal root ganglia homeobox (drgx), mRNA. (864 bp)
AUTHORS Dyer C, Linker C, Graham A and Knight R. TITLE Specification of sensory neurons occurs through diverse developmental programs functioning in the brain and spinal cord JOURNAL Dev Dyn 243 (11), 1429-1439 (2014) PUBMED 25179866 REFERENCE 4 (bases 1 to 864) AUTHORS Aoki M, Segawa H, Naito M and Okamoto H. TITLE Identification of possible downstream genes required for the extension of peripheral axons in primary sensory neurons JOURNAL Biochem Biophys Res Commun 445 (2), 357-362 (2014) PUBMED 24513284 REFERENCE 5 (bases 1 to 864) AUTHORS Dyer C, Blanc E, Hanisch A, Roehl H, Otto GW...
Synonym: prrxl1
NM_001037105.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio T cell leukemia homeobox 3b (tlx3b), mRNA. (2281 bp)
Postlethwait,J.H., Guiguen,Y. and Bobe,J. TITLE Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database JOURNAL BMC Genomics 17, 368 (2016) PUBMED 27189481 REMARK Publication Status: Online-Only REFERENCE 5 (bases 1 to 2281) AUTHORS Aoki,M., Segawa,H., Naito,M. and Okamoto,H. TITLE Identification of possible downstream genes required for the extension of peripheral axons in primary sensory neurons JOURNAL Biochem Biophys Res Commun 445 (2), 357-362 (2014) PUBMED 24513284 REFERENCE 6 (bases 1 to 2281) AUTHORS Wotton,K.R., Weierud,F.K., Dietrich,S. and...
Synonym: Tlx-3b; ztlx-3b
NM_170766.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio family with sequence similarity 53 member B (fam53b), mRNA. (1740 bp)
G., Moro,E., Argenton,F., Brand,M., Weidinger,G. and Antos,C.L. TITLE Simplet/Fam53b is required for Wnt signal transduction by regulating beta-catenin nuclear localization JOURNAL Development 141 (18), 3529-3539 (2014) PUBMED 25183871 REFERENCE 4 (bases 1 to 1740) AUTHORS Aoki,M., Segawa,H., Naito,M. and Okamoto,H. TITLE Identification of possible downstream genes required for the extension of peripheral axons in primary sensory neurons JOURNAL Biochem Biophys Res Commun 445 (2), 357-362 (2014) PUBMED 24513284 REFERENCE 5 (bases 1 to 1740) AUTHORS Aanes,H., Winata,C.L., Lin,C.H., Chen,J.P.,...
Synonym: wu:fo86c04; zgc:55329; zgc:77156
NM_001007187.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio fasciculation and elongation protein zeta 1 (zygin I) (fez1), mRNA. (2176 bp)
G.I., Strome,S.E., Durand,B., Zaghloul,N.A., Jones,S.M., Reith,W. and Hertzano,R. TITLE RFX transcription factors are essential for hearing in mice JOURNAL Nat Commun 6, 8549 (2015) PUBMED 26469318 REMARK Publication Status: Online-Only REFERENCE 6 (bases 1 to 2176) AUTHORS Aoki,M., Segawa,H., Naito,M. and Okamoto,H. TITLE Identification of possible downstream genes required for the extension of peripheral axons in primary sensory neurons JOURNAL Biochem Biophys Res Commun 445 (2), 357-362 (2014) PUBMED 24513284 REFERENCE 7 (bases 1 to 2176) AUTHORS Andersen,I.S., Reiner,A.H., Aanes,H.,...
Synonym: wu:fj14c12; zgc:73258
NM_213396.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio taste receptor, type 1, member 2, tandem duplicate 2 (tas1r2.2), mRNA. (2472 bp)
AUTHORS Oike H, Nagai T, Furuyama A, Okada S, Aihara Y, Ishimaru Y, Marui T, Matsumoto I, Misaka T and Abe K. TITLE Characterization of ligands for fish taste receptors JOURNAL J Neurosci 27 (21), 5584-5592 (2007) PUBMED 17522303 REFERENCE 5 (bases 1 to 2472) AUTHORS Ishimaru Y, Okada S, Naito H, Nagai T, Yasuoka A, Matsumoto I and Abe K. TITLE Two families of candidate taste receptors in fishes JOURNAL Mech Dev 122 (12), 1310-1321 (2005) PUBMED 16274966...
Synonym: tas1r2b
NM_001083856.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio protein tyrosine kinase 7a (ptk7a), mRNA. (1316 bp)
AUTHORS Challa AK and Chatti K. TITLE Conservation and early expression of zebrafish tyrosine kinases support the utility of zebrafish as a model for tyrosine kinase biology JOURNAL Zebrafish 10 (3), 264-274 (2013) PUBMED 23234507 REFERENCE 10 (bases 1 to 1316) AUTHORS Hayes M, Naito M, Daulat A, Angers S and Ciruna B. TITLE Ptk7 promotes non-canonical Wnt/PCP-mediated morphogenesis and inhibits Wnt/beta-catenin-dependent cell fate decisions during vertebrate development JOURNAL Development 140 (8), 1807-1818 (2013) PUBMED 23533179 REMARK Erratum:...
Synonym: zgc:112211
NM_001020665.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio endoplasmic reticulum protein 44 (erp44), mRNA. (2090 bp)
Li X, Li X, Li Q and Cui Z. TITLE Transcriptional events co-regulated by hypoxia and cold stresses in Zebrafish larvae JOURNAL BMC Genomics 16, 385 (2015) PUBMED 25975375 REMARK Publication Status: Online-Only REFERENCE 5 (bases 1 to 2090) AUTHORS Wang DY, Abbasi C, El-Rass S, Li JY, Dawood F, Naito K, Sharma P, Bousette N, Singh S, Backx PH, Cox B, Wen XY, Liu PP and Gramolini AO. TITLE Endoplasmic reticulum resident protein 44 (ERp44) deficiency in mice and zebrafish leads to cardiac developmental and functional defects JOURNAL J Am Heart Assoc 3 (5), e001018 (2014) PUBMED 25332179 REMARK...
Synonym: txndc4; zgc:77883
NM_200892.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio microtubule-associated protein 1B (map1b), mRNA. (9660 bp)
REFERENCE 5 (bases 1 to 9660) AUTHORS Dow E, Siletti K and Hudspeth AJ. TITLE Cellular projections from sensory hair cells form polarity-specific scaffolds during synaptogenesis JOURNAL Genes Dev. 29 (10), 1087-1094 (2015) PUBMED 25995190 REFERENCE 6 (bases 1 to 9660) AUTHORS Aoki M, Segawa H, Naito M and Okamoto H. TITLE Identification of possible downstream genes required for the extension of peripheral axons in primary sensory neurons JOURNAL Biochem. Biophys. Res. Commun. 445 (2), 357-362 (2014) PUBMED 24513284...
NM_001128201.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio taste receptor, type 1, member 2, tandem duplicate 1 (tas1r2.1), mRNA. (2478 bp)
and Ngai J. TITLE The repertoire of olfactory C family G protein-coupled receptors in zebrafish: candidate chemosensory receptors for amino acids JOURNAL BMC Genomics 7, 309 (2006) PUBMED 17156446 REMARK Publication Status: Online-Only REFERENCE 5 (bases 1 to 2478) AUTHORS Ishimaru Y, Okada S, Naito H, Nagai T, Yasuoka A, Matsumoto I and Abe K. TITLE Two families of candidate taste receptors in fishes JOURNAL Mech Dev 122 (12), 1310-1321 (2005) PUBMED 16274966...
Synonym: tas1r2a
NM_001039831.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio taste receptor, type 1, member 1 (tas1r1), mRNA. (2466 bp)
TK, Fredriksson R and Schioth HB. TITLE The gene repertoire and the common evolutionary history of glutamate, pheromone (V2R), taste(1) and other related G protein-coupled receptors JOURNAL Gene 362, 70-84 (2005) PUBMED 16229975 REFERENCE 5 (bases 1 to 2466) AUTHORS Ishimaru Y, Okada S, Naito H, Nagai T, Yasuoka A, Matsumoto I and Abe K. TITLE Two families of candidate taste receptors in fishes JOURNAL Mech Dev 122 (12), 1310-1321 (2005) PUBMED 16274966 REMARK GeneRIF: Two families of candidate taste receptors in zebrafish, T1Rs and T2Rs, show significant identity to mammalian T1Rs and T2Rs,...
NM_001039525.2 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio myosin light chain kinase 2 (mylk2), mRNA. (3948 bp)
activating Wnt signaling JOURNAL Mol Biosyst 5 (11), 1356-1360 (2009) PUBMED 19823752 REMARK Erratum:[Mol Biosyst. 2009 Nov;5(11):1369] REFERENCE 7 (bases 1 to 3948) AUTHORS Seguchi O, Takashima S, Yamazaki S, Asakura M, Asano Y, Shintani Y, Wakeno M, Minamino T, Kondo H, Furukawa H, Nakamaru K, Naito A, Takahashi T, Ohtsuka T, Kawakami K, Isomura T, Kitamura S, Tomoike H, Mochizuki N and Kitakaze M. TITLE A cardiac myosin light chain kinase regulates sarcomere assembly in the vertebrate heart JOURNAL J Clin Invest 117 (10), 2812-2824 (2007) PUBMED 17885681...
Synonym: mlck2
NM_001423712.1 - Danio rerio (zebrafish) - NCBI - UCSC
Danio rerio myosin light chain kinase 3 (mylk3), mRNA. (3210 bp)
novel transcripts mediating the behavioral effects of amphetamine JOURNAL Genome Biol 10 (7), R81 (2009) PUBMED 19646228 REFERENCE 8 (bases 1 to 3210) AUTHORS Seguchi,O., Takashima,S., Yamazaki,S., Asakura,M., Asano,Y., Shintani,Y., Wakeno,M., Minamino,T., Kondo,H., Furukawa,H., Nakamaru,K., Naito,A., Takahashi,T., Ohtsuka,T., Kawakami,K., Isomura,T., Kitamura,S., Tomoike,H., Mochizuki,N. and Kitakaze,M. TITLE A cardiac myosin light chain kinase regulates sarcomere assembly in the vertebrate heart JOURNAL J Clin Invest 117 (10), 2812-2824 (2007) PUBMED 17885681 REMARK GeneRIF: These results...
Synonym: bZ34G2.1; fc41h03; mlck; si:rp71-34g2.1; wu:fc41h03
NM_001105587.2 - Danio rerio (zebrafish) - NCBI - UCSC

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0.105 | 0.003 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]