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Previous release (v1)
2026-04-24 22:13:18, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XM_073926974 9831 bp mRNA linear VRT 12-MAY-2025
DEFINITION PREDICTED: Danio rerio dicer 1, ribonuclease type III (dicer1),
transcript variant X6, mRNA.
ACCESSION XM_073926974
VERSION XM_073926974.1
DBLINK BioProject: PRJNA1248012
KEYWORDS RefSeq.
SOURCE Danio rerio (zebrafish)
ORGANISM Danio rerio
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
Cypriniformes; Danionidae; Danioninae; Danio.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_133192) annotated using gene prediction method: Gnomon,
supported by mRNA and EST evidence.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_049306965.1-RS_2025_04
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.3
Annotation Method :: Best-placed RefSeq; Gnomon;
cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 04/11/2025
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..9831
/organism="Danio rerio"
/mol_type="mRNA"
/strain="Tuebingen"
/isolation_source="Zebrafish international resource
center"
/db_xref="taxon:7955"
/chromosome="17"
/sex="male"
/tissue_type="Fibroblasts and whole tissue"
/dev_stage="adult"
/ecotype="United States"
/geo_loc_name="USA"
/collection_date="2022-07-19"
/collected_by="National Human Genome Research Institute"
/genotype="Double heterozygous"
gene 1..9831
/gene="dicer1"
/gene_synonym="fc39d11; fc74b05; wu:fc39d11; wu:fc74b05"
/note="dicer 1, ribonuclease type III; Derived by
automated computational analysis using gene prediction
method: Gnomon. Supporting evidence includes similarity
to: 2 mRNAs, 12 ESTs, 6056 long SRA reads, 18 Proteins"
/db_xref="GeneID:324724"
/db_xref="ZFIN:ZDB-GENE-030131-3445"
misc_feature 1
/gene="dicer1"
/gene_synonym="fc39d11; fc74b05; wu:fc39d11; wu:fc74b05"
/experiment="COORDINATES: cap analysis [ECO:0007248]"
/note="transcription start site"
CDS 415..6012
/gene="dicer1"
/gene_synonym="fc39d11; fc74b05; wu:fc39d11; wu:fc74b05"
/codon_start=1
/product="endoribonuclease Dicer isoform X1"
/protein_id="XP_073783075.1"
/db_xref="GeneID:324724"
/db_xref="ZFIN:ZDB-GENE-030131-3445"
/translation="
MAGLQLVTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALEHNTIVCLNTGSGKTFIAVLLIKELSHQIRGENGKRTVFLVNAASSVAQQASTVRTHSDLQVGDYMSEDMTSWPEEMWNREMIENQVLVMTCHIFLHVLKNGVLPLSKINLLVFDECHLAITGHPYREIMKICEGCPSCPRILGLTASILNGKCDPCDLEEKIQNLEKILQSNAETATDLVVLDRYASQPREEVLDCGQYQDQSGLSERLLNELDEALSFLNDCNLSVHREDRDPTFISKQVLNDCRAVLTVLGPWCADKAAGIMVRELQKYIKHEQEELNRKFLLFTDTILRKIHALCEEHFSPASLDLKFVTPKVIRLLEILHEYKPFERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEAEAKEKTEANFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIGKNQPRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPVSNYIMLADSERTKTFQEDLKTYKAIEKILRNKCSKSAECNDFELEPVTDDDNVLPPYVLRSEDGGPRVTMNTAIGHVNRYCARLPSDPFTHLAPKCKTVEMNTGGYRSTLFLPINSPLRVPVTGPVMNCARLAEKAVALLCCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRGCYPVPEQPCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTTRCFGILTAKPIPRIPHFPVYTRSGEVTISIELQKSGFSLSAEQLELITRLHQYIFSHILRLEKPALEFKPVEADSAYCVLPLNIVEDSNTLDLDFKFMEDIEKSEARIGIPNTQYTKQNPFIFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAEYYKTKYNLDLSNVNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRSQTAIDAGVGAQTLPPDFRYPNLDFGWKKSIDSKSFISCPSACMEEDDDHCKLGTSSDSNHTAPESCSMEVSQPPDGALNTPDEKLETLALPVTDLNKDCFPNLPNGTQADSDDLPHRSDVCQCSQLGPLERDLSTQTTTSVSVRPSPAGEPQPWPSDECTGRSSDLCDPHVKKPTSKHCPKSETATSTAAPSETSSEDCRSACAGPAWDSPKTLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSSTDKWDSDENKDLANGKASDDEDEDDDDEPEEAEVEPSKEDVNVEDDLEYYYEHIRFIDSMLIGSGAFGKKISLQPTDPGYEWKAPKKAHNSHFSPDGGADEFDYSSWDAMCYLDPSKAGEEDDFVVGFWNPSEENCGTDIGKQSISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPPEKQSSGGSAELQYGWLKIPPRCMFEHPDAERTLNHLISGFLNFESKINYTFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLETVWQVYYPMMRPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVQNN"
misc_feature 508..1089
/gene="dicer1"
/gene_synonym="fc39d11; fc74b05; wu:fc39d11; wu:fc74b05"
/note="DEXH-box helicase domain of endoribonuclease Dicer;
Region: DEXHc_dicer; cd18034"
/db_xref="CDD:350792"
misc_feature order(508..519,526..528,577..600,712..714,898..900,
991..993)
/gene="dicer1"
/gene_synonym="fc39d11; fc74b05; wu:fc39d11; wu:fc74b05"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:350792"
misc_feature order(676..681,748..753,823..825,829..834,841..843,
916..924)
/gene="dicer1"
/gene_synonym="fc39d11; fc74b05; wu:fc39d11; wu:fc74b05"
/note="nucleic acid binding site [nucleotide binding];
other site"
/db_xref="CDD:350792"
misc_feature 1183..1467
/gene="dicer1"
/gene_synonym="fc39d11; fc74b05; wu:fc39d11; wu:fc74b05"
/note="Partner-binding domain of the endoribonuclease
Dicer; Region: Dicer_PBD; cd15903"
/db_xref="CDD:277191"
misc_feature order(1198..1203,1210..1212,1216..1221,1396..1401,
1408..1413,1420..1422,1429..1434,1441..1443)
/gene="dicer1"
/gene_synonym="fc39d11; fc74b05; wu:fc39d11; wu:fc74b05"
/note="Trbp binding interface [polypeptide binding]; other
site"
/db_xref="CDD:277191"
misc_feature 1486..2064
/gene="dicer1"
/gene_synonym="fc39d11; fc74b05; wu:fc39d11; wu:fc74b05"
/note="C-terminal helicase domain of the endoribonuclease
Dicer; Region: SF2_C_dicer; cd18802"
/db_xref="CDD:350189"
misc_feature order(1717..1725,1933..1935,1990..1992,1996..1998)
/gene="dicer1"
/gene_synonym="fc39d11; fc74b05; wu:fc39d11; wu:fc74b05"
/note="DNA binding site [nucleotide binding]"
/db_xref="CDD:350189"
misc_feature order(1945..1947,1951..1953,2026..2028,2032..2034)
/gene="dicer1"
/gene_synonym="fc39d11; fc74b05; wu:fc39d11; wu:fc74b05"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:350189"
misc_feature 2260..2526
/gene="dicer1"
/gene_synonym="fc39d11; fc74b05; wu:fc39d11; wu:fc74b05"
/note="Dicer dimerization domain; Region: Dicer_dimer;
pfam03368"
/db_xref="CDD:460900"
misc_feature 3028..3396
/gene="dicer1"
/gene_synonym="fc39d11; fc74b05; wu:fc39d11; wu:fc74b05"
/note="PAZ domain, dicer_like subfamily. Dicer is an RNAse
involved in cleaving dsRNA in the RNA interference
pathway. It generates dsRNAs which are approximately 20 bp
long (siRNAs), which in turn target hydrolysis of
homologous RNAs. PAZ domains are named...; Region:
PAZ_dicer_like; cd02843"
/db_xref="CDD:239209"
misc_feature order(3217..3219,3256..3258,3274..3276,3286..3288,
3340..3342,3364..3366,3370..3372)
/gene="dicer1"
/gene_synonym="fc39d11; fc74b05; wu:fc39d11; wu:fc74b05"
/note="nucleic acid-binding interface [nucleotide
binding]; other site"
/db_xref="CDD:239209"
misc_feature 4246..>4521
/gene="dicer1"
/gene_synonym="fc39d11; fc74b05; wu:fc39d11; wu:fc74b05"
/note="Ribonuclease III family; Region: RIBOc; smart00535"
/db_xref="CDD:197778"
misc_feature order(4297..4302,4309..4314,4321..4323,4330..4335,
4342..4347,4351..4359,4387..4389)
/gene="dicer1"
/gene_synonym="fc39d11; fc74b05; wu:fc39d11; wu:fc74b05"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238333"
misc_feature 5287..5781
/gene="dicer1"
/gene_synonym="fc39d11; fc74b05; wu:fc39d11; wu:fc74b05"
/note="Ribonuclease III C terminal domain. This group
consists of eukaryotic, bacterial and archeal ribonuclease
III (RNAse III) proteins. RNAse III is a double stranded
RNA-specific endonuclease. Prokaryotic RNAse III is
important in post-transcriptional...; Region: RIBOc;
cd00593"
/db_xref="CDD:238333"
misc_feature order(5347..5352,5359..5364,5371..5373,5380..5385,
5392..5397,5401..5409,5437..5439,5701..5703,5734..5736)
/gene="dicer1"
/gene_synonym="fc39d11; fc74b05; wu:fc39d11; wu:fc74b05"
/note="dimerization interface [polypeptide binding]; other
site"
/db_xref="CDD:238333"
misc_feature order(5347..5349,5356..5358,5368..5370,5671..5673,
5680..5682)
/gene="dicer1"
/gene_synonym="fc39d11; fc74b05; wu:fc39d11; wu:fc74b05"
/note="active site"
/db_xref="CDD:238333"
misc_feature order(5356..5358,5671..5673,5680..5682)
/gene="dicer1"
/gene_synonym="fc39d11; fc74b05; wu:fc39d11; wu:fc74b05"
/note="metal binding site [ion binding]; metal-binding
site"
/db_xref="CDD:238333"
misc_feature 5794..5982
/gene="dicer1"
/gene_synonym="fc39d11; fc74b05; wu:fc39d11; wu:fc74b05"
/note="double-stranded RNA binding motif of
endoribonuclease Dicer and similar proteins; Region:
DSRM_DICER; cd10843"
/db_xref="CDD:380680"
misc_feature order(5794..5799,5803..5808,5815..5820,5827..5832,
5842..5844,5857..5865,5869..5871,5875..5877,5926..5937,
5944..5946)
/gene="dicer1"
/gene_synonym="fc39d11; fc74b05; wu:fc39d11; wu:fc74b05"
/note="putative RNA binding site [nucleotide binding];
other site"
/db_xref="CDD:380680"
polyA_site 9831
/gene="dicer1"
/gene_synonym="fc39d11; fc74b05; wu:fc39d11; wu:fc74b05"
/experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN
caacagcagcagcagcaggagggaatggggagagaggggctccgcaccgtttaacaagacactcttcagcacaacacgaccattaaaacaattcaccatcgaacatcgaaggaatactgtctcaggccccctcccccatctgcagctttgagcagagtaactcaaggggagaaaagaatgagctgattttaagagctcagataatgatgcccagaataagtgcggcctggtcacagagcaaagtggggaacgcacacgctgacacaatagcattgtgacacgcttgctgatttcactcacatcctactgatctgatgttacgtggtctgtctccggcagtgagcattagatggccatgatgcaatgagataaacactggatgactggaggtctcctgcttatcagtctctaagcatggctggcctacagctggtgacccctgcctcctcacccatggggcccttctttggtctcccgtggcaacaggaagctatccatgacaacatatatacaccaaggaaatatcaggttgaacttcttgaagcagctcttgaacataatactatagtctgcttaaatactggctcagggaagacctttatcgcagtgctcctaatcaaagaactctcccaccaaattcgtggcgagaatgggaagaggacagttttcctggtgaatgcagcgtcatctgtggctcagcaagcatctactgtaagaacacactctgatctccaagtaggcgactatatgtcagaggacatgacatcatggcccgaggagatgtggaacagagagatgatagagaatcaggtgctggtgatgacgtgccacatcttcctgcatgttttaaagaatggagtcttgccactatcaaagatcaacctgctagtttttgacgaatgccaccttgcaatcactggccatccttatcgggaaataatgaagatttgtgaaggttgccccagctgtcctcgcattttgggtctcactgcttccattttaaatggcaaatgtgacccttgtgatttggaggagaaaattcagaacctggagaagattcttcagagcaatgcagaaactgccactgatcttgtggtgctggataggtatgcgtcgcagccgcgtgaggaggtgctggattgtggacagtaccaagatcagagtgggctctcggagaggcttttaaatgagctggacgaagccctcagctttctaaacgattgcaacttgtctgtacatagagaagatagagaccccacgtttatctccaaacaggtgctgaatgactgtcgtgctgtgctgactgtgctgggcccttggtgtgcagataaagctgcaggaatcatggttcgggagctgcagaaatatattaaacatgaacaggaagagctaaaccgcaagttcctgttgttcactgacaccatcctgaggaaaatccatgccttatgtgaggagcatttttccccagcttccctcgacctgaagtttgtcactcccaaggtcatcagactcttggaaattctccacgagtacaagcctttcgaacggcagcagtttgagagtgtggagtggtacaacaatcgcaatcaggacaattatgtttcttggagcgattctgaagatgatgatgaggacgaagaggcggaggcaaaggagaaaaccgaagcaaattttccctcgccgttcacaaatatcctctgtggaatcatctttgtggaaaggcgatatacagcggttgttttaaacagacttattaaggaggcaggaaagcaagacccagagctggcttacatcagtagcaacttcatcacagggcacagcatcggcaagaaccagcctcgcaacaagcagatggaggtggagttcagaaaacaagaggaagtcttgaggaaattcagagcccatgaaaccaacttgctcattgcaaccagcattgtggaggaaggcgtcgatatcccaaagtgcaatttggtcgttcggtttgacctgccgacagagtaccggtcgtacgtgcaatccaaaggtcgagcccgtgctccagtctccaactacatcatgctagcagacagcgaacggactaaaaccttccaagaagacctcaagacctacaaggccatagagaagatcctccgaaataagtgctcgaagtcggctgaatgcaatgattttgagctggagcctgtgaccgatgatgacaatgttctcccaccgtacgtcctgcgctcagaggacggcgggcctcgtgtcaccatgaacactgccattgggcacgtcaaccgatattgtgcgcgcttgcccagtgatccgttcactcatctcgctccgaagtgtaaaactgtagagatgaacaccggagggtatcgatccacactcttcctacctatcaactcaccactcagagttcctgtcaccgggccagtaatgaattgtgcaagactggctgagaaagctgtcgctcttctctgttgtgaaaaactccacaaaattggtgaactggatgatcatctgatgcctgtgggaaaggaaactgtgaagtatgaggaggagctggacctgcatgatgaagaggagacaagcgtgccaggaagaccaggctccactaaacggagacagtgctacccaaaagccataccagagtgtctgcggggttgttaccctgtgccagagcagccttgctatctttacgttattgggatggtcctcaccacccctctacctgacgaactcaacttccggcggaggaagctgtatccaccagaggacacaacccgatgttttggcattctgacagctaaaccaatacctcggatccctcatttccctgtgtacactcgttctggtgaggtgaccatctccattgagctgcagaagtcgggctttagtctaagtgcggagcagctggagctgatcacacgtctgcatcagtacatcttctcccacatcctccgtctggaaaagccagcactagagtttaagcctgtagaggcagattctgcctactgtgttctacctctcaacatcgttgaggattccaatactttggatctggatttcaagttcatggaggatattgaaaagtctgaagcacgcattggcattccaaacactcagtacaccaagcaaaacccattcatcttcaaattggaggactaccaggatgctgtcatcattccaaggtatcgtaattttgaccagccgcatcggttctacgtggctgacgtttacacagacctcaccccgctcagtaaattcccctctccagagtacgagacttttgccgaatactataaaaccaagtacaacctggacctgtcaaatgttaatcagcccctactggatgtggaccacacatcttcaagattgaatcttttaactccccggcaccttaatcaaaaggggaaagcccttcctctcagcagtgcggagaagagaaaggccaagtgggaaagcctacaaaacaaacagattttagttccggagctctgtgccattcaccccatcccagcctctttgtggaggaaagccgtctgccttcccagcattctctacagacttcactgccttctgacggccgaagagctgcggtctcagacagccatcgatgctggcgtaggggctcagaccttgcctcctgatttcaggtatcctaatttggatttcggatggaagaaatccatcgacagcaagtctttcatctcctgccccagtgcatgtatggaagaagacgacgatcactgtaaactcggcacaagctccgattcaaaccacactgcccccgagagctgcagtatggaggtctcccagcctccagacggcgctctcaacacaccagatgaaaagctagaaaccctcgctctccctgtgactgatctaaacaaagactgtttcccaaacctcccaaacggcactcaggccgacagcgacgacctccctcacagaagtgacgtttgccaatgctctcagctgggccctctggagagagacctatcaacacaaaccactacctcagtttcagtgcggccctctccagctggagaaccacagccatggcccagcgatgaatgtacaggcaggagctcagatctctgcgacccacatgtgaagaaacctacctcaaagcattgccctaaatcggagacggcgactagcaccgcagcaccttcagaaacgtcatcagaggactgtagatcagcctgcgctggtccagcctgggattcgcccaaaaccctgggcccgaaccccgggctcatcctgcaggccctgactctctccaacgccagtgacggcttcaatctggaacgcctggagatgctgggcgactctttcctgaaacacgccatcaccacatacctgttctgcacttaccctgacgcccacgagggcagactgtcctacatgagaagcaagaaggtcagcaactgtaacctgtatcggctggggaagaagaagggtcttccgagtcgaatggtggtgtccatctttgacccgccggtaaactggcttcctccaggctacgtcgtgaatcaggacaaaagcagcacagacaagtgggactcagatgagaataaagatttagcgaatggaaaagccagcgatgacgaagacgaggatgacgatgatgagccggaagaagcagaggtcgagccatctaaagaagatgtaaatgttgaagatgacctggagtattattacgaacacatccgcttcatcgacagcatgttaatcggctctggcgctttcggcaagaagatctccctccagcccacagaccccggctacgaatggaaagctcccaaaaaagcccacaactcccacttctcgccagacgggggtgctgacgagttcgattacagctcctgggacgccatgtgttacctggaccccagtaaagcaggtgaggaggacgattttgtggtgggcttctggaatccctctgaggaaaactgcggcacagacatcgggaaacagtccatctcttatgaccttcacacggagcagtgcatcgcagataagagcatagcggactgtgtggaggctctgctgggctgctatctgaccagctgtggtgagcgagcggctcagctgtttctctgctctctgggcctgaaggtgctgccaccggagaagcagagttcgggaggctctgccgagctccagtacggctggctgaagatcccaccacgctgcatgttcgaacatcctgacgctgaacgcactctcaaccacctcatctctggcttcctgaacttcgagagcaagatcaactacacgtttaagaacaaggcgtacctgctgcaggccttcacacacgcctcgtatcattacaacaccattacagattgttatcagcggttggagtttcttggtgatgcaattctagactacctcataaccaagcacctttatgaagacccccggcagcactcgcccggcgtgctgaccgacctgcgctctgcacttgtcaacaacaccatattcgcttccctggctgtcaagtatgattaccacaagtacttcaaagctgtctcgccagaactcttccacgtgatcgacgattttgtgcaatttcaactggagaagaatgaaatgcaaggaatggattcggagcttcgccgatcggaggaagatgaagagaaagaggaagacattgaagtccccaaagcaatgggagacatctttgaatcgctagctggtgcaatttacatggatagcgggatgtcacttgagacagtttggcaagtgtattatccaatgatgaggccgctcatagaaaaattctccgctaatgtccctcgatccccagtgcgtgaactcctggagatggagccagagacagctaagttcagccctgcggaaagaacttatgatggaaaggtacgggtgacggtggaagtcgtgggcaaaggcaagttcaaaggcgtaggacgcagctaccggatagccaagtcagcagccgcccgccgagccctgcgcagtctcaaagccaaccaacctcaggtccaaaacaactgagacacccggtcaaatacgccgcaatgaaccaatccagtcacgggatttcagctcaattcacatggggttcatatttcatgttattctttacgtgcgcaaacacaatctttttttctccccagctttgttggatcacgagtgcttttcatgtatcgcaagtgttaagaaaaaggtcaggtcttcttacacccacaatttccctatttttattaacatttaaaaaaagaaagatatatgctctgcttcgtagtagtggttaaaatagctaaagcttataggtagtattacagtgtacatagttcataactccaagctatcaactaagtaagagaaaaaaaaaaagtgacatacaaacacaaaattcctcaatctgtgcactagtgccaggaagggcacgtaagatggtgttggtattggaagtgttttaatcttgagatgactttattctcaatcaaacttgcacttctgtagggtccgttttattagatagtttttttttccgccagatcacagcggaatcgttttagatctatattgtattgaaagtgaaaggcccttgcatccttgagacagataggaatttgacattcccgattactgtaatcagcatagttgtgaacggcacttgaggatgcatgttcgtgtagccaaccgaatgggttgtatagacgtcataaagctacgttattaaaaaacaaaaaagaattacgctattaaatgtttattacgacatatatatgttgatacttgggtttcagtaatgtcttttgatactgatattgatgatatttagttgacagtctttatgaacattagatgtctccatagactgacttagttttgatataacgacacgaacgataaacaggaggacatatcacctgggaaaatatgctgcagattttatatttaaaaaaaagaaaaaaacaacaacggaaagagaaaaatagcatcggataattctgtaagacacaaagcacctttacgtacgtctttaggatatttcgctagatgacttcacgcgcatcgcttaccaaagtcgatattgatgcagcgttgtgaggtcgcacctgtaaaaatcgatccctcaacattcacacatttggagatgtggtaaccagcctttaatttagcgtaaatgtgttgtagcctctcgtctagcctaaatgttttcatattaataggcattcttcacttgaatacctcagttaattgcatgcatgttttttttttttttggtgctatgtttaagcttgaatttctcatcttttttgcactgtaactgtattacctcttaattttgtctttttgaaatctgttggattggtttttctgttctgtcagctcgtcaggctgtagaaatcatttccctgttgtgtattcttttagtttttatgcttgaaggggaaatgctgaggaaaaaaaaaaacagttctccgcacataagcttgatgcatttctgatgagctcggattttccttcacgtgaaaactgttgtgtatcctattagatggggttgcttgacacttgaaaaaaatcgatggattgcactcttataagccatgtgtctcactttttattctctctttcagtcttaccaagtctaatctgttaaaaaacagttaactaatcattgataccccatatataagggtgcaaattttaataaaaaatgtgtgaaattgaatttttacatcttaaaggctacctaatttccccctatctcattctgtctgtttagttattatgttatggacaaactattcctgaagttacattatcccagccattgctacctcagaagatccttgcgaatagtttggccttatcataagatcttgatgtgctgatatgccttctaacaaatctgaatggcattaaggcacagtattgcttgaaaaaaaaaaacgcttatcagcaccttaacagggggataaatatatactcatgactatttgcactagaatacattcccactgacattaagtttgcatcttttaaatggagtttgctaaaaaagcggtgcctttcaactctgtaacatcgaaactctcgtcttatgctactgtagcaagttttcgcattttggtgccatgctttatactggatattgccttccaattgatttgtttatcatttcgtaaaccatctaaaatttgacgtcggtcctgtcttgagaatgagtgcaatctgtttcaattttcgcaagagttgagcgaccctctttacatgatctcagtcgcaaccccagaatttagtattgatagttattggaattgagcgggattcacatatttgctcagccaatggcgtgaatttgtgcatcagggtcaatgtgcgccagccctgcaatatgacactgtttctgtaacccttaaccttcagactattgcaactttattttgtttgtttgtgtgtgttcatatttttctagcttgttacgtatccccccctcccctcctcaagcctctaaaaggcacacacttatttacctttcacaagctttcttctcactgttggttttgaactttcagagaatgtgaaatcacacatatggtgccaccgcatggatatgaactttttgttttcttttctttttttcccggacttattttttttgcaatctaataatcaatgatcggttcccacagaactgataacaccttaaaaaaaggaaagaattggagtcttttatcatctgtgggagcgttttgttaaagtggtcctccatcgtatcatatgctgcagattgtattttccttcatggtggagaataattctttgtgtgttgtttattattactttctttcttttctttttaaacatgtagcacaaataagcattgcactcgggcgccatactttacctcatgtcagaatgataaaaaaataaaataagataaaatacaaaacgtgtatatatgatgccgtaacgtttaaaggaataacttgtggtttcggccttgctgctgtttgcaacgctggttattgtaccaatgtatttaaaaaaaaaaaaaaaaagtgatcggagagatacaatgtgcctgcaggatatcatcagagaaaatacactgtagaaaagtagtttcaaatctctacaatctggggctaaatatgtgtcctatgtgtacattcatgtcctgccttaatgtaattctttgaatatggaattgtaatgtaacccgtcaagtctttggactggcatgattttaatatgttggggccgcgtcgtccctttccccatcatcccctttctcccatattagttggagtatatacatcctgatgtattagtgcatgtcagtgaagactttcccttctcaccaacctgtatttcctttttagactaaatacattgtatagatctgattacgtcagccctagatttatttacaagggctttatttcataacaaagtgtcatatttgttttttttaaagacaaaaaaaaatattgtaattgcctgatttaaaagtcaaatgcactcttagcagcagcaaggtgtttaaagacaacataacaggactggaatgtgtggcgagctccttttgcggggagtttatgggattgttgagcaccgtggagcactaaaagttttgaacgggaattatgggccacaaactgcagctcaatttctgtatttttaagggacgtgtatttaaatgactctttctcattcatactgtatcagtgctgcagtggtatgcattctgcaccttatggatcacaaaaacctttacaaagtctgcccccctcccccctcttttttaagtaattgtagctgagtatatctacaataaagttatggtatggtcgttca
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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