LOCUS       XM_009294577            2966 bp    mRNA    linear   VRT 15-JUN-2017
DEFINITION  PREDICTED: Danio rerio Meis homeobox 2b (meis2b), transcript
            variant X1, mRNA.
ACCESSION   XM_009294577
VERSION     XM_009294577.2
DBLINK      BioProject: PRJNA13922
KEYWORDS    RefSeq.
SOURCE      Danio rerio (zebrafish)
  ORGANISM  Danio rerio
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Danionidae; Danioninae; Danio.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_007131.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jun 15, 2017 this sequence version replaced XM_009294577.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Danio rerio Annotation Release 106
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2966
                     /organism="Danio rerio"
                     /mol_type="mRNA"
                     /strain="Tuebingen"
                     /db_xref="taxon:7955"
                     /chromosome="20"
     gene            1..2966
                     /gene="meis2b"
                     /gene_synonym="meis2; meis2.1"
                     /note="Meis homeobox 2b; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     mRNAs, 14 ESTs, 15 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     109 samples with support for all annotated introns"
                     /db_xref="GeneID:30066"
                     /db_xref="ZFIN:ZDB-GENE-000210-23"
     CDS             690..1871
                     /gene="meis2b"
                     /gene_synonym="meis2; meis2.1"
                     /codon_start=1
                     /product="meis homeobox 2b isoform X1"
                     /protein_id="XP_009292852.1"
                     /db_xref="GeneID:30066"
                     /db_xref="ZFIN:ZDB-GENE-000210-23"
                     /translation="

MLMAQRYEDLAHYGGGMDGVGVPTSMYGDPHAPRPLPQVHHLNHGPPPHANQHYGAHAPHSIMPSSMGSAVNDALKRDKDQIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQIRAEKPLFSSNPELDNLMIQSIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGCKSDFDDLSGSSTNLADHNPASWRDMDDAHSTPSVGTPGPSSGGHASQSGDNSSELGDGLDNSLASPGTGDEDDQDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQGTAYSPDGQPMGGFVLDGQQHMGLRPGGPMGGMGMNMGMDGQWHYM"

     misc_feature    1023..1277
                     /gene="meis2b"
                     /gene_synonym="meis2; meis2.1"
                     /note="N-terminal of Homeobox Meis and PKNOX1; Region:
                     Meis_PKNOX_N; pfam16493"
                     /db_xref="CDD:465140"
     misc_feature    order(1518..1529,1533..1535,1593..1595,1611..1613,
                     1650..1652,1656..1661,1668..1673,1677..1685)
                     /gene="meis2b"
                     /gene_synonym="meis2; meis2.1"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     misc_feature    order(1521..1523,1530..1532,1659..1661,1668..1673,
                     1680..1682)
                     /gene="meis2b"
                     /gene_synonym="meis2; meis2.1"
                     /note="specific DNA base contacts [nucleotide binding];
                     other site"
                     /db_xref="CDD:238039"
     misc_feature    1569..1685
                     /gene="meis2b"
                     /gene_synonym="meis2; meis2.1"
                     /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920"
                     /db_xref="CDD:428673"
ORIGIN      

tgaagctggaagcctaacggcaggtttgtgggactcgctggatccgaagaactagaagaaaagtatcgtgcggctcaaacacacatcatgacgggtcaagcaaaggtcaaaacttgaaattacagtggattatcggtttatcagcatgggcgacgaacactgacatttaaagaggtgtcgagctggtaacacccaccacgcttcccaggctcagtcatcagggcttcagtccttcaagaggaacctgcttcactcaccaacacaatcccagttgaggcaaagcctgggtcgcaaaaaagagaccatgagatccggatagtttttttttttctttttcatttcctttgcagcgtttgccatgccagacacgagcatcctataatttggaaagattcttctgacttcgggaagtctgataagcgtaaattgcattagacagtcaaatgattcaagtggaggcatatatttgacaggctgtatgaagtaaatgtgccggtcttttatttaagtgaactcgtgctaaaaaggaagcgatcagaaactcttcacaggacattctcttatcatcttaacggattaccgacagatcagtcctattaaaccggatacacaaaaggaattaaatcacccagattgtttcctcgttggattagatcgcagtttgctctaagcatcaacagaagtgtcatatgctgatggctcaacggtacgaagaccttgcccactatggtggcgggatggatggagttggggttccgacgtcgatgtacggggacccgcacgcgcctcggcccctgccgcaggttcatcatttgaatcacgggccgccaccacatgccaaccaacactacggggcccacgcaccacacagcatcatgcccagcagcatgggctcagctgtcaacgacgcacttaaaagagacaaggaccaaatttacgggcacccgttattcccgctgctggcgctggtgtttgagaagtgcgagctggccacatgcacaccgagagagccgggagtcgctggaggagatgtgtgttcatctgattcatttaacgaggacatcgctgtgtttgccaaacagattcgtgcagagaagccgttattttcctctaacccagagctggataatttgatgattcagtcaatacaagtattacgatttcatcttttagaactcgaaaaggtgcacgagctttgcgacaatttctgccatcggtatattagctgtttgaagggcaaaatgcctattgacctagtaattgatgaacgggatggatgcaaatctgacttcgacgacctctcaggatcatcaacaaatctcgcagatcacaatccagcatcctggagagacatggacgacgctcactccactccctcagttggcaccccgggaccctccagcggaggacatgcctcccagagcggagacaacagcagtgaactaggagatggcttggataacagcttggcatctccgggaactggggatgaggacgatcaggacaaaaaacggcagaagaaaagaggaatcttccccaaagtggcgaccaacatcatgcgggcatggctcttccaacatctcacgcacccctacccatctgaagagcagaagaagcagctagcacaagacacaggcctcaccatcttacaagtgaataactggtttatcaatgctcgaagaagaatcgtgcagcccatgattgatcagtctaacagagccgtaagtcaaggaaccgcttacagccctgatggtcagcctatgggcggctttgtgctagatggccaacaacacatgggtcttcggcctggcggtcccatgggaggaatggggatgaacatgggtatggatggacagtggcactacatgtaaacgcctccccgcttcccaaaccataaacgttttgatggtggcctcaggaatagtcccagtgctggccggaatcatgaggagtcacatcacattcatcctcacctgatcactgatcatcttcattcgtcacgagaaacctctcacagacccctcctcacctagccatcagaatctccagccaaaggacttcctgcaggaacaccaacagaacaaaatacagacttgaagcatttgtgccaaaagagagacttctgaaaagacaattggagatcttttccttttaaattatttatttattcttgttataacgtcaagaagcacgggggaccacaccatttgtgcactttgctcaaccatagagtggcggtcccagaagaaaatactccatacctccacatgcacaagcgcacacacactcatattaaatgcatttaacagtggaatatagtaaaagatgctaaaagccctcaagaactgaactgtgagtgtacaatgacattttgctttgtttttcttttgggaaatgttcgatgtttgagtttgtgtcattgactagttttagacctttgcatttatgattctacacagtttgaaggaaatgaaaccactggtgggatcactgtagcacacatctgacacaaattccagtatctgaaaccacaaagtcttccccacatgagatgctttaaaaagcatcgctgaagaaatgagctgtgcgtttatttgttgaattggagagcaacagtgctcttgtaaggctaagtatgcctggaggagtttttaaaaccactagagatgttccattgtacataattatgtaaatgttatttgtaaaacgcatcaatgtcaaatagacattcagtcgagatcctttaaaaaattaagatgggatatttgttgtacattttggtccgttttcactcttgcttttctctatggaaaaaaagtcgattatatgtttgttgatgtactggaacgtttgatcgattctcccgctctgtccattttttccttttaggagtcttttaaagcagtatttctacacagtcaaaagtcaaattcttgtaataaaggcttcattttcgaaacgttaaa

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