LOCUS       NM_001441599            1953 bp    mRNA    linear   VRT 18-JUN-2025
DEFINITION  Danio rerio si:dkeyp-2e4.7 (si:dkeyp-2e4.7), transcript variant 2,
            mRNA.
ACCESSION   NM_001441599
VERSION     NM_001441599.1
KEYWORDS    RefSeq.
SOURCE      Danio rerio (zebrafish)
  ORGANISM  Danio rerio
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Danionidae; Danioninae; Danio.
REFERENCE   1  (bases 1 to 1953)
  AUTHORS   Pasquier,J., Cabau,C., Nguyen,T., Jouanno,E., Severac,D.,
            Braasch,I., Journot,L., Pontarotti,P., Klopp,C., Postlethwait,J.H.,
            Guiguen,Y. and Bobe,J.
  TITLE     Gene evolution and gene expression after whole genome duplication
            in fish: the PhyloFish database
  JOURNAL   BMC Genomics 17, 368 (2016)
   PUBMED   27189481
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JBMGRA010000013.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR32588729.38321754.1,
                                           SRR32588722.2114067.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA4476772, SAMEA4476784
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-78                JBMGRA010000013.1  48433431-48433508   c
            79-1953             JBMGRA010000013.1  48430270-48432144   c
FEATURES             Location/Qualifiers
     source          1..1953
                     /organism="Danio rerio"
                     /mol_type="mRNA"
                     /strain="Tuebingen"
                     /db_xref="taxon:7955"
                     /chromosome="13"
                     /map="13"
     gene            1..1953
                     /gene="si:dkeyp-2e4.7"
                     /note="si:dkeyp-2e4.7"
                     /db_xref="GeneID:108191950"
                     /db_xref="ZFIN:ZDB-GENE-061009-51"
     exon            1..78
                     /gene="si:dkeyp-2e4.7"
                     /inference="alignment:Splign:2.1.0"
     exon            79..1953
                     /gene="si:dkeyp-2e4.7"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    88..90
                     /gene="si:dkeyp-2e4.7"
                     /note="upstream in-frame stop codon"
     CDS             109..807
                     /gene="si:dkeyp-2e4.7"
                     /codon_start=1
                     /product="zinc finger protein-like"
                     /protein_id="NP_001428528.1"
                     /db_xref="GeneID:108191950"
                     /db_xref="ZFIN:ZDB-GENE-061009-51"
                     /translation="

MKPVIKNEESLQGDPESTNNDVETLVLSKTEGSAALFCRRLKYRVKTDETSDQSSSDTDTEDELPISTSPTPGEDFIMRIHTGEAPYVCELCGKAFKRKHWLKEHFYIHTGVKRKRKKRLSCDQCEMKFECSSVLQGHLNKHRGERPFACVQCDKTYFNQHDLKQHLRDCHSEKKHGCYLCGNEFSRRSLLQKHMRIHTGERPYSCPHCEKTFPYKYSFEMHVKSAVCRRDK"

ORIGIN      

agaagaagaagatgctcgtacaaaagaggacatgacccaacgatgttggcaaaataataattcttgattgattaatagatgtttgcttgaagtccggcctgcatcaatatgaagcctgtgatcaaaaatgaagagtctcttcagggagatccagagtccactaataatgatgtggaaactttggttctgagtaaaacagaaggatcggctgctctcttttgcagacggctgaaatatcgagtaaaaactgatgaaacatcagatcaaagttcatcagatactgacacagaagatgagcttcccatctccacatctccaactcctggtgaagacttcatcatgcgaatacacacaggagaagcgccctatgtctgtgaactctgtggtaaagcgttcaaacgtaaacactggcttaaagaacacttttacatccatactggtgtcaaacgcaagcgcaagaagagattgagctgtgatcagtgtgaaatgaagtttgagtgctcctctgttcttcaaggtcatttaaataagcacagaggcgagaggccgttcgcctgcgttcagtgcgacaaaacctacttcaatcaacatgatcttaaacaacacctcagagactgtcattcagaaaaaaagcacggctgctatttgtgtggaaatgaattttctcgccgctctttactgcagaaacacatgcggatccacacaggagagagaccttactcctgtccacactgtgagaagactttcccctataaatacagctttgaaatgcatgttaaaagtgctgtatgtaggagagataaatgagatattgtagtacaaatgaaaaatatggaaaaaatattcactttgtctctcctattatgactccatgcaagttgccagattgtcgacaatctagttttacactgtgaactgctcagctacttgctgtgtttgtaatatttatattgtttgctaattaaaaaccaccttgtggatttttacaactctgaatctgcatctcattactgtcctgtggaggtcacattttcagctgcaccagcatactatgaagcagccttcatgactgaaattaaatgcactggtttccaccaaagcaacacggggtgcaatataactggaaaaatttatgacaaaaagaggaaacacccaagaccctttcaaagactggtaacattttatggtgccagcacatgtcggtgttgaggaaaatgaagtagatattccagaaaagaaagcagtaaaacatcagcaaacagaaatgaatgcagcattcagaactcaaaagattaagtttaatggaaggaagaaatggcaaacatcatggatcaacgggtctaaaggaagacatctgtttcagatttaacagtgtgttggaaacgagaggaaaagatatggaggtaggaagaaagatatcaagattaagaatagctcatacaacactgaactacactgcacaaaatagtgaagcgtgaaactgggatacaagtgtgtggacattcagaaactgctaactattttagtttgtcaagcatataaaaggagatttcaattcatgacttaggtctcctggtttaaacatttctctttaaaagtgttgttgaaatggttcagtgcaatgtaaagtgcaaaacttatttaattacttgaaagacaggatttattgacagaatctagttttcaattaatgtttttttacgtaaatgttttagttttctttaaaactatccacactctaaatcagttggtggcgaaaatgcagcttctccttggtctgccaagactgcaataaagcactggaagaccctcttaaagacctgcggatggcagcaaagcgcctttatgagtcaagtctgcccaaatatcagaagaagaagaagatgatcgcacaaaagaggacaatcatgacccaacgatgttggcaaaataaatgattattcttgattgatt

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