LOCUS       NM_001098745            2565 bp    mRNA    linear   VRT 16-SEP-2024
DEFINITION  Danio rerio protein O-glucosyltransferase 3 (poglut3), mRNA.
ACCESSION   NM_001098745 XM_689328
VERSION     NM_001098745.1
KEYWORDS    RefSeq.
SOURCE      Danio rerio (zebrafish)
  ORGANISM  Danio rerio
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Danionidae; Danioninae; Danio.
REFERENCE   1  (bases 1 to 2565)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 2565)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC142839.1.
            
            On Jun 20, 2007 this sequence version replaced XM_689328.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC142839.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA3505373, SAMEA3505376
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..2565
                     /organism="Danio rerio"
                     /mol_type="mRNA"
                     /db_xref="taxon:7955"
                     /chromosome="21"
                     /map="21"
     gene            1..2565
                     /gene="poglut3"
                     /gene_synonym="im:7159505; kdelc2; zgc:165521"
                     /note="protein O-glucosyltransferase 3"
                     /db_xref="GeneID:566063"
                     /db_xref="ZFIN:ZDB-GENE-060810-142"
     exon            1..449
                     /gene="poglut3"
                     /gene_synonym="im:7159505; kdelc2; zgc:165521"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    170..172
                     /gene="poglut3"
                     /gene_synonym="im:7159505; kdelc2; zgc:165521"
                     /note="upstream in-frame stop codon"
     CDS             221..1777
                     /gene="poglut3"
                     /gene_synonym="im:7159505; kdelc2; zgc:165521"
                     /EC_number="2.4.2.26"
                     /note="KDEL (Lys-Asp-Glu-Leu) containing 2"
                     /codon_start=1
                     /product="protein O-glucosyltransferase 3"
                     /protein_id="NP_001092215.1"
                     /db_xref="GeneID:566063"
                     /db_xref="ZFIN:ZDB-GENE-060810-142"
                     /translation="

MILHINKRKTFAPVPNVAFPLVITIALSVGFGQTIEINPGKCLVWGPGLNPDVVLPVRYFYIQTVDSQGENITLSPDKDSFKVKISSLEKEYLRIHVPAPLDRGDGSLLVRYRLYGSTLKGLKIEVLYQDKQVAKSPYTLNGPIYHEYCDCPESDVAAWQRVMQCPQEDPQIQKDFSSFPSIDLQQLLQEVPTRFAKRGGLIHYTILNNQVHRRSLGRYTDFKMFSDEILLSLARKVKLPDVEFYINVGDWPMENRKVNDNPGPVPVISWCGSTETRDIILPTYDITHSSLEAMRGVTNDLLSVQGNTGPTWSDKMNKAFFRGRDSREERLRLVTMSKENPELLDAGITAYFFFRDREKDLGKAPLVGFFDFFKYKYQVNVDGTVAAYRFPYLMLGNSLVLKQDSPYYEHFYTHLKPGVHYIPVKRDLSDLIEKIKWAKSNDTEAEAIARRGQSLVRDLLQPHRLYCYYYKVFQTYADRQSSRPAVHPDMEIVPQPTDQTALCNCKRAENQKPQKDEL"

     misc_feature    332..637
                     /gene="poglut3"
                     /gene_synonym="im:7159505; kdelc2; zgc:165521"
                     /note="Filamin/ABP280 repeat; Region: Filamin; pfam00630"
                     /db_xref="CDD:395505"
     misc_feature    698..1705
                     /gene="poglut3"
                     /gene_synonym="im:7159505; kdelc2; zgc:165521"
                     /note="Glycosyl transferase family 90; Region:
                     Glyco_transf_90; cl23835"
                     /db_xref="CDD:329112"
     exon            450..644
                     /gene="poglut3"
                     /gene_synonym="im:7159505; kdelc2; zgc:165521"
                     /inference="alignment:Splign:2.1.0"
     exon            645..928
                     /gene="poglut3"
                     /gene_synonym="im:7159505; kdelc2; zgc:165521"
                     /inference="alignment:Splign:2.1.0"
     exon            929..1145
                     /gene="poglut3"
                     /gene_synonym="im:7159505; kdelc2; zgc:165521"
                     /inference="alignment:Splign:2.1.0"
     exon            1146..1342
                     /gene="poglut3"
                     /gene_synonym="im:7159505; kdelc2; zgc:165521"
                     /inference="alignment:Splign:2.1.0"
     exon            1343..1537
                     /gene="poglut3"
                     /gene_synonym="im:7159505; kdelc2; zgc:165521"
                     /inference="alignment:Splign:2.1.0"
     exon            1538..1642
                     /gene="poglut3"
                     /gene_synonym="im:7159505; kdelc2; zgc:165521"
                     /inference="alignment:Splign:2.1.0"
     exon            1643..2547
                     /gene="poglut3"
                     /gene_synonym="im:7159505; kdelc2; zgc:165521"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

attttttaggcgcaccgcaacacaagcgccacgctcaaaatctaccctaattatttttaagcgtgttattttcagtgttaatgcaacaacttcgggtctacaaaaggagaaaaagcaaaaaggtgtattaacaatgccaataaattcttagcagcgttttctgtaattttaagttacctttactctcctgctactccgaacgactgaaccaactgataaaatgattctgcatataaacaaaagaaaaacttttgcacctgtaccaaatgttgccttccccctagtcattactatagctttaagtgtagggtttggtcagactattgagattaatccgggtaaatgtctcgtttggggtcctggattgaatcctgatgttgtgcttcctgtccggtacttttacatacaaactgttgattcacaaggggaaaacatcaccctctctccagataaagactcttttaaagtgaagatttcctcactggaaaaggagtatcttcgaatacatgtcccagcacccttggatcggggcgacggctcccttcttgtcagataccgcctctatggaagtactttgaagggattaaagattgaagttttgtaccaggacaagcaagtggcaaagtcaccatacactcttaacggtcccatttatcatgaatactgtgactgtccagagtctgatgtggcagcctggcagagggttatgcagtgtccacaggaagacccacaaattcaaaaggatttcagttcatttccatctattgacctgcagcagctcctgcaggaggttccaacacgctttgcaaagcgaggaggactcattcactacaccattttaaacaatcaggtgcatcggcggtcactcgggaggtacactgatttcaagatgttctctgatgagatactgctgtccctcgctcgaaaagtaaaattgcctgacgtggagttttatattaatgtaggagactggccaatggagaaccgaaaagtgaatgacaatcctggaccagtgcctgttatttcatggtgcggctccactgaaacgcgggatatcatacttcccacatacgacatcacacattcatccttagaggcaatgagaggggtaacaaatgacctgctgtcggtgcaggggaacacaggtcccacatggtcagacaaaatgaacaaagcgttctttagaggcagggacagccgtgaagaacgtttgcgtctggtcaccatgtctaaagaaaatccagagctgctcgatgcaggaataacagcttactttttctttcgcgatcgggagaaggatcttggaaaagcacctctggttggcttctttgacttttttaagtacaagtaccaagtgaatgtggatgggactgtggcggcctacagatttccatacttgatgctgggcaacagtttggtcttaaaacaggactcaccatactacgagcacttttacacacatctgaaaccaggtgtacactacattcctgtgaagagggacctttctgacctcatcgagaagattaaatgggccaagagcaacgacacagaggcagaagccatagccaggagaggacagtcattggtgagagatctgcttcaacctcatagactttactgctactactacaaagtgtttcagacctatgcagatcgtcagagcagtcggcctgctgttcatcctgatatggaaatagtgcctcagccaacagatcaaactgctttgtgtaactgtaagagagcagaaaatcagaaaccacagaaagatgagctctgaggtcagtccaaaccctcacagttccttttccaccaaagattaacttacaaaatgatgccacaagcgacacaaaagtctaatagatctgaaaggaaaatcaaacactcagtgacactgaatcagaatagtttgtgttcgatgtactttcaaaggataagggatggactgtttcatttgaagcgaaaagataaaaaaaaatatctgtacccatgcattacacacttttttttgttttatttacattttgcacattatttacttaagaatccattcacattgcatatatgagttgaattgagcaatcaaatacttatcttttaatcccttgtttatccttactaggcttcatcagtatggaaaccaaggttaatgaatatatattttgaaacattgcacaaaaaaagtctgtgaaacctgtgaataggctacatttagtttaccagtggaagctaagcattatactcatttcctaacactacactcataaacttaaacatgcttgaaaatattgcattctatgaccgctcagagtggactgctgaattatggtgatgtgatatatgtgtgtgtttgacttgtggagatcttttagaaatataaacaatcattgtgaagttgccttaattctatacacattccatttgtttgcaatctccatttgtgtcaaacaggtgtttttgtggtagtgtgacattgttatgccaacaaacttgttttaatgaaaaagaataacaatgctgtttcttaataaacgctcttcagtcatttaaaaaaaaaaaaaaaaaaaa

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