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2024-11-23 18:34:57, GGRNA : RefSeq release 226 (Sep, 2024)

Summary:

Results:

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Drosophila melanogaster brain-specific homeobox (bsh), transcript variant C, mRNA. (1503 bp)
LOCUS NM_058002 1503 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster brain-specific homeobox (bsh), transcript variant C, mRNA. ACCESSION NM_058002 VERSION NM_058002.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This...
Synonym: Bsh; BSH; bsk; CG10604; Dmel\CG10604; E86; Hox11-310; lambdaE86
NM_058002.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster brain-specific homeobox (bsh), transcript variant B, mRNA. (2012 bp)
LOCUS NM_206006 2012 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster brain-specific homeobox (bsh), transcript variant B, mRNA. ACCESSION NM_206006 VERSION NM_206006.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This...
Synonym: Bsh; BSH; bsk; CG10604; Dmel\CG10604; E86; Hox11-310; lambdaE86
NM_206006.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster visual system homeobox 1, transcript variant B (Vsx1), mRNA. (3633 bp)
LOCUS NM_001297969 3633 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster visual system homeobox 1, transcript variant B (Vsx1), mRNA. ACCESSION NM_001297969 VERSION NM_001297969.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase...
Synonym: CG4136; Chx1; dChx1; Dchx1; DChx1; Dmel\CG4136; dVsx1; DVSX1; lincRNA.S8688; Vsx; Vsx-1
NM_001297969.1 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster visual system homeobox 2, transcript variant A (Vsx2), mRNA. (2358 bp)
LOCUS NM_001038743 2358 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster visual system homeobox 2, transcript variant A (Vsx2), mRNA. ACCESSION NM_001038743 VERSION NM_001038743.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase...
Synonym: CG15781; CG15782; CG15783; CG33980; Chx2; dChx2; DChx2; Dmel\CG33980; dVsx2; Vsx; vsx2
NM_001038743.1 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster visual system homeobox 2, transcript variant B (Vsx2), mRNA. (2373 bp)
LOCUS NM_001297968 2373 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster visual system homeobox 2, transcript variant B (Vsx2), mRNA. ACCESSION NM_001297968 VERSION NM_001297968.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase...
Synonym: CG15781; CG15782; CG15783; CG33980; Chx2; dChx2; DChx2; Dmel\CG33980; dVsx2; Vsx; vsx2
NM_001297968.1 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster visual system homeobox 1, transcript variant A (Vsx1), mRNA. (2983 bp)
LOCUS NM_132004 2983 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster visual system homeobox 1, transcript variant A (Vsx1), mRNA. ACCESSION NM_132004 VERSION NM_132004.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This...
Synonym: CG4136; Chx1; dChx1; Dchx1; DChx1; Dmel\CG4136; dVsx1; DVSX1; lincRNA.S8688; Vsx; Vsx-1
NM_132004.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster Ods-site homeobox (OdsH), mRNA. (1289 bp)
LOCUS NM_078665 1289 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster Ods-site homeobox (OdsH), mRNA. ACCESSION NM_078665 VERSION NM_078665.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is derived from an...
Synonym: CG6352; Dmel\CG6352; odsh; odsH; Odsh; OdsH[mel]
NM_078665.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster hematopoietically expressed homeobox (HHEX), mRNA. (1267 bp)
LOCUS NM_142681 1267 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster hematopoietically expressed homeobox (HHEX), mRNA. ACCESSION NM_142681 VERSION NM_142681.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is...
Synonym: CG7056; dHHEX; Dmel\CG7056
NM_142681.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster LIM homeobox 1 (Lim1), transcript variant B, mRNA. (2708 bp)
LOCUS NM_001272429 2708 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster LIM homeobox 1 (Lim1), transcript variant B, mRNA. ACCESSION NM_001272429 VERSION NM_001272429.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This...
Synonym: BcDNA:GH04929; CG10760; CG11354; dlim-1; dlim1; dLim1; Dlim1; Dmel\CG11354; Lim; lim1; LIM1
NM_001272429.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster H6-like-homeobox (Hmx), transcript variant E, mRNA. (3384 bp)
LOCUS NM_001300447 3384 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster H6-like-homeobox (Hmx), transcript variant E, mRNA. ACCESSION NM_001300447 VERSION NM_001300447.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This...
Synonym: CG18139; CG34419; CG43748; CG5829; CG5832; DHmx; Dmel\CG43748; hmx
NM_001300447.1 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster H6-like-homeobox (Hmx), transcript variant C, mRNA. (2691 bp)
LOCUS NM_169763 2691 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster H6-like-homeobox (Hmx), transcript variant C, mRNA. ACCESSION NM_169763 VERSION NM_169763.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is...
Synonym: CG18139; CG34419; CG43748; CG5829; CG5832; DHmx; Dmel\CG43748; hmx
NM_169763.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster retinal homeobox (Rx), mRNA. (3267 bp)
DRx; E97; PPH17; rx; W60; wom" /note="Retinal Homeobox" /map="57B4-57B4" /db_xref="FLYBASE:FBgn0020617" /db_xref="GeneID:37367" CDS 297..3010 /gene="Rx" /locus_tag="Dmel_CG10052" /gene_synonym="bk50; CG10052; Dmel\CG10052; drx; Drx; DRx; E97; PPH17; rx; W60; wom" /inference="similar to RNA sequence, mRNA (same species):INSD:AJ223300.1" /exception="annotated by transcript or proteomic data" /note="CG10052 gene product from transcript CG10052-RB; frameshift; CG10052-PB; Rx-PB; drosophila Rx; wombat" /codon_start=1 /product="retinal homeobox" /protein_id="NP_726006.3" /db_xref="FLYBASE:...
Synonym: bk50; CG10052; Dmel\CG10052; drx; Drx; DRx; E97; PPH17; rx; W60; wom
NM_166413.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster H6-like-homeobox (Hmx), transcript variant D, mRNA. (2691 bp)
LOCUS NM_001275745 2691 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster H6-like-homeobox (Hmx), transcript variant D, mRNA. ACCESSION NM_001275745 VERSION NM_001275745.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This...
Synonym: CG18139; CG34419; CG43748; CG5829; CG5832; DHmx; Dmel\CG43748; hmx
NM_001275745.1 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster dorsal root ganglia homeobox, transcript variant F (Drgx), mRNA. (2989 bp)
LOCUS NM_001298663 2989 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster dorsal root ganglia homeobox, transcript variant F (Drgx), mRNA. ACCESSION NM_001298663 VERSION NM_001298663.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE COMMENT REVIEWED REFSEQ: This record has been curated by...
Synonym: CG10017; CG2808; CG34340; Dmel\CG34340
NM_001298663.1 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster dorsal root ganglia homeobox, transcript variant E (Drgx), mRNA. (2612 bp)
LOCUS NM_001103605 2612 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster dorsal root ganglia homeobox, transcript variant E (Drgx), mRNA. ACCESSION NM_001103605 VERSION NM_001103605.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE COMMENT REVIEWED REFSEQ: This record has been curated by...
Synonym: CG10017; CG2808; CG34340; Dmel\CG34340
NM_001103605.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster LIM homeobox transcription factor 1 alpha (Lmx1a), transcript variant C, mRNA. (2640 bp)
LOCUS NM_001274825 2640 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster LIM homeobox transcription factor 1 alpha (Lmx1a), transcript variant C, mRNA. ACCESSION NM_001274825 VERSION NM_001274825.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE COMMENT REVIEWED REFSEQ: This record has been...
Synonym: CG10432; CG17615; CG32105; dLmx1a; Dmel\CG32105
NM_001274825.1 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster LIM homeobox 1 (Lim1), transcript variant A, mRNA. (3081 bp)
LOCUS NM_132277 3081 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster LIM homeobox 1 (Lim1), transcript variant A, mRNA. ACCESSION NM_132277 VERSION NM_132277.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE COMMENT REVIEWED REFSEQ: This record has been curated by FlyBase. This record is...
Synonym: BcDNA:GH04929; CG10760; CG11354; dlim-1; dlim1; dLim1; Dlim1; Dmel\CG11354; Lim; lim1; LIM1
NM_132277.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster LIM homeobox transcription factor 1 alpha (Lmx1a), transcript variant B, mRNA. (2643 bp)
LOCUS NM_168497 2643 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster LIM homeobox transcription factor 1 alpha (Lmx1a), transcript variant B, mRNA. ACCESSION NM_168497 VERSION NM_168497.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila melanogaster Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. REFERENCE COMMENT REVIEWED REFSEQ: This record has been curated...
Synonym: CG10432; CG17615; CG32105; dLmx1a; Dmel\CG32105
NM_168497.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster homothorax (hth), transcript variant A, mRNA. (4226 bp)
misc_feature 1656..1910 /gene="hth" /locus_tag="Dmel_CG17117" /gene_synonym="1323/07; 1422/04; anon-EST:Liang-2.13; CG17117; clone 2.13; Dm-HTH; Dmel\CG17117; dtl; Hth; HTH; hth1; hth2; l(3)05745; l(3)86Ca; Meis1; MEIS1; P53" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(2331..2342,2346..2348,2406..2408,2424..2426, 2463..2465,2469..2474,2481..2486,2490..2498) /gene="hth" /locus_tag="Dmel_CG17117" /gene_synonym="1323/07; 1422/04; anon-EST:Liang-2.13; CG17117; clone 2.13; Dm-HTH; Dmel\CG17117; dtl; Hth; HTH; hth1; hth2; l...
Synonym: 1323/07; 1422/04; anon-EST:Liang-2.13; CG17117; clone 2.13; Dm-HTH; Dmel\CG17117; dtl; Hth; HTH; hth1; hth2; l(3)05745; l(3)86Ca; Meis1; MEIS1; P53
NM_057230.6 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster homothorax (hth), transcript variant C, mRNA. (6557 bp)
misc_feature 1656..1910 /gene="hth" /locus_tag="Dmel_CG17117" /gene_synonym="1323/07; 1422/04; anon-EST:Liang-2.13; CG17117; clone 2.13; Dm-HTH; Dmel\CG17117; dtl; Hth; HTH; hth1; hth2; l(3)05745; l(3)86Ca; Meis1; MEIS1; P53" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" misc_feature order(2376..2387,2391..2393,2451..2453,2469..2471, 2508..2510,2514..2519,2526..2531,2535..2543) /gene="hth" /locus_tag="Dmel_CG17117" /gene_synonym="1323/07; 1422/04; anon-EST:Liang-2.13; CG17117; clone 2.13; Dm-HTH; Dmel\CG17117; dtl; Hth; HTH; hth1; hth2; l...
Synonym: 1323/07; 1422/04; anon-EST:Liang-2.13; CG17117; clone 2.13; Dm-HTH; Dmel\CG17117; dtl; Hth; HTH; hth1; hth2; l(3)05745; l(3)86Ca; Meis1; MEIS1; P53
NM_057228.5 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster drop (Dr), mRNA. (2552 bp)
CDS 251..1798 /gene="Dr" /locus_tag="Dmel_CG1897" /gene_synonym="153515_at; 99B; CG1897; Dmel\CG1897; Dr/msh; Dr/Msh; l(3)FA30; ltt; msh; Msh; msh-1; msh1; Msx" /note="CG1897 gene product from transcript CG1897-RA; CG1897-PA; Dr-PA; muscle-specific homeodomain 1; Dr-distal; muscle segment homeobox; lottchen; muscle specific homeobox" /codon_start=1 /product="drop" /protein_id="NP_477324.1" /db_xref="FLYBASE:FBpp0084807" /db_xref="GeneID:45285" /db_xref="FLYBASE:FBgn0000492" /translation="...
Synonym: 153515_at; 99B; CG1897; Dmel\CG1897; Dr/msh; Dr/Msh; l(3)FA30; ltt; msh; Msh; msh-1; msh1; Msx
NM_057976.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster vismay (vis), transcript variant A, mRNA. (1741 bp)
gene_synonym="achi/vis; CG8821; Dmel\CG8821; dTGIFa; TGIFa; zaa" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 421..537 /gene="vis" /locus_tag="Dmel_CG8821" /gene_synonym="achi/vis; CG8821; Dmel\CG8821; dTGIFa; TGIFa; zaa" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" ORIGIN // REFERENCE 1 (bases 1 to 1741) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium...
Synonym: achi/vis; CG8821; Dmel\CG8821; dTGIFa; TGIFa; zaa
NM_078990.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster vismay (vis), transcript variant B, mRNA. (2124 bp)
gene_synonym="achi/vis; CG8821; Dmel\CG8821; dTGIFa; TGIFa; zaa" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 504..620 /gene="vis" /locus_tag="Dmel_CG8821" /gene_synonym="achi/vis; CG8821; Dmel\CG8821; dTGIFa; TGIFa; zaa" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" ORIGIN // REFERENCE 1 (bases 1 to 2124) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium...
Synonym: achi/vis; CG8821; Dmel\CG8821; dTGIFa; TGIFa; zaa
NM_176157.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster achintya (achi), transcript variant A, mRNA. (2122 bp)
dTGIF; dTGIFa; dTGIFb; TGIF; vis; zaa" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 638..754 /gene="achi" /locus_tag="Dmel_CG8819" /gene_synonym="ach; Achi; achi/vis; CG8819; Dmel\CG8819; dTGIF; dTGIFa; dTGIFb; TGIF; vis; zaa" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" ORIGIN // REFERENCE 1 (bases 1 to 2122) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase...
Synonym: ach; Achi; achi/vis; CG8819; Dmel\CG8819; dTGIF; dTGIFa; dTGIFb; TGIF; vis; zaa
NM_165911.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster achintya (achi), transcript variant D, mRNA. (2277 bp)
dTGIF; dTGIFa; dTGIFb; TGIF; vis; zaa" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 406..522 /gene="achi" /locus_tag="Dmel_CG8819" /gene_synonym="ach; Achi; achi/vis; CG8819; Dmel\CG8819; dTGIF; dTGIFa; dTGIFb; TGIF; vis; zaa" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" ORIGIN // REFERENCE 1 (bases 1 to 2277) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase...
Synonym: ach; Achi; achi/vis; CG8819; Dmel\CG8819; dTGIF; dTGIFa; dTGIFb; TGIF; vis; zaa
NM_001299423.1 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster achintya (achi), transcript variant C, mRNA. (2509 bp)
dTGIF; dTGIFa; dTGIFb; TGIF; vis; zaa" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 638..754 /gene="achi" /locus_tag="Dmel_CG8819" /gene_synonym="ach; Achi; achi/vis; CG8819; Dmel\CG8819; dTGIF; dTGIFa; dTGIFb; TGIF; vis; zaa" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" ORIGIN // REFERENCE 1 (bases 1 to 2509) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase...
Synonym: ach; Achi; achi/vis; CG8819; Dmel\CG8819; dTGIF; dTGIFa; dTGIFb; TGIF; vis; zaa
NM_165912.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster araucan (ara), transcript variant B, mRNA. (2918 bp)
Dmel\CG10571; iro; Iro; iro-C; Iro-C; IRO-C; IroC" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 1227..1343 /gene="ara" /locus_tag="Dmel_CG10571" /gene_synonym="Ara; CG10571; Dmel\CG10571; iro; Iro; iro-C; Iro-C; IRO-C; IroC" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" ORIGIN // REFERENCE 1 (bases 1 to 2918) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase...
Synonym: Ara; CG10571; Dmel\CG10571; iro; Iro; iro-C; Iro-C; IRO-C; IroC
NM_001169961.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster caupolican (caup), mRNA. (4317 bp)
Dmel\CG10605; iro; Iro; iro-C; Iro-C; IRO-C; IroC" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 1871..1987 /gene="caup" /locus_tag="Dmel_CG10605" /gene_synonym="Caup; CG10605; Dmel\CG10605; iro; Iro; iro-C; Iro-C; IRO-C; IroC" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" misc_feature 2501..2554 /gene="caup" /locus_tag="Dmel_CG10605" /gene_synonym="Caup; CG10605; Dmel\CG10605; iro; Iro; iro-C; Iro-C; IRO-C; IroC" /note="Motif in Iroquois-class homeodomain proteins (only). Unknown function; Region: IRO...
Synonym: Caup; CG10605; Dmel\CG10605; iro; Iro; iro-C; Iro-C; IRO-C; IroC
NM_079322.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster araucan (ara), transcript variant A, mRNA. (2942 bp)
Dmel\CG10571; iro; Iro; iro-C; Iro-C; IRO-C; IroC" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 1251..1367 /gene="ara" /locus_tag="Dmel_CG10571" /gene_synonym="Ara; CG10571; Dmel\CG10571; iro; Iro; iro-C; Iro-C; IRO-C; IroC" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" ORIGIN // REFERENCE 1 (bases 1 to 2942) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase...
Synonym: Ara; CG10571; Dmel\CG10571; iro; Iro; iro-C; Iro-C; IRO-C; IroC
NM_079321.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster mirror (mirr), transcript variant B, mRNA. (3019 bp)
site" /db_xref="CDD:238039" misc_feature 1400..1516 /gene="mirr" /locus_tag="Dmel_CG10601" /gene_synonym="CG10601; cre; crep; De1; De3; DH1; Dmel\CG10601; group F; Group F; iro; Iro; iro-C; Iro-C; IRO-C; IroC; l(3)69Ca; l(3)69Da; l(3)6D1; l(3)A5-3-42; mir; Mirr; MIRR; mrr; Mrr; Sai" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" ORIGIN // REFERENCE 1 (bases 1 to 3019) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase...
Synonym: CG10601; cre; crep; De1; De3; DH1; Dmel\CG10601; group F; Group F; iro; Iro; iro-C; Iro-C; IRO-C; IroC; l(3)69Ca; l(3)69Da; l(3)6D1; l(3)A5-3-42; mir; Mirr; MIRR; mrr; Mrr; Sai
NM_168505.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster mirror (mirr), transcript variant A, mRNA. (3892 bp)
site" /db_xref="CDD:238039" misc_feature 1400..1516 /gene="mirr" /locus_tag="Dmel_CG10601" /gene_synonym="CG10601; cre; crep; De1; De3; DH1; Dmel\CG10601; group F; Group F; iro; Iro; iro-C; Iro-C; IRO-C; IroC; l(3)69Ca; l(3)69Da; l(3)6D1; l(3)A5-3-42; mir; Mirr; MIRR; mrr; Mrr; Sai" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" ORIGIN // REFERENCE 1 (bases 1 to 3892) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase...
Synonym: CG10601; cre; crep; De1; De3; DH1; Dmel\CG10601; group F; Group F; iro; Iro; iro-C; Iro-C; IRO-C; IroC; l(3)69Ca; l(3)69Da; l(3)6D1; l(3)A5-3-42; mir; Mirr; MIRR; mrr; Mrr; Sai
NM_079323.4 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster mirror (mirr), transcript variant C, mRNA. (3892 bp)
site" /db_xref="CDD:238039" misc_feature 1400..1516 /gene="mirr" /locus_tag="Dmel_CG10601" /gene_synonym="CG10601; cre; crep; De1; De3; DH1; Dmel\CG10601; group F; Group F; iro; Iro; iro-C; Iro-C; IRO-C; IroC; l(3)69Ca; l(3)69Da; l(3)6D1; l(3)A5-3-42; mir; Mirr; MIRR; mrr; Mrr; Sai" /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920" /db_xref="CDD:428673" ORIGIN // REFERENCE 1 (bases 1 to 3892) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase...
Synonym: CG10601; cre; crep; De1; De3; DH1; Dmel\CG10601; group F; Group F; iro; Iro; iro-C; Iro-C; IRO-C; IroC; l(3)69Ca; l(3)69Da; l(3)6D1; l(3)A5-3-42; mir; Mirr; MIRR; mrr; Mrr; Sai
NM_001274849.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster ladybird late (lbl), transcript variant B, mRNA. (1758 bp)
ladybird late" /map="93E1-93E1" /db_xref="FLYBASE:FBgn0008651" /db_xref="GeneID:42541" CDS 167..1051 /gene="lbl" /locus_tag="Dmel_CG6570" /gene_synonym="CG6570; Dmel\CG6570; lb; Lb; Lbl; NK?; nkch4; NKch4" /note="CG6570 gene product from transcript CG6570-RB; CG6570-PB; lbl-PB; NK-cluster homeobox 4; lady-bird-late; ladybird" /codon_start=1 /product="ladybird late, isoform B" /protein_id="NP_001138092.1" /db_xref="FLYBASE:FBpp0289338" /db_xref="GeneID:42541" /db_xref="FLYBASE:FBgn0008651" /translation="...
Synonym: CG6570; Dmel\CG6570; lb; Lb; Lbl; NK?; nkch4; NKch4
NM_001144620.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster ladybird late (lbl), transcript variant A, mRNA. (1855 bp)
ladybird late" /map="93E1-93E1" /db_xref="FLYBASE:FBgn0008651" /db_xref="GeneID:42541" CDS 167..1285 /gene="lbl" /locus_tag="Dmel_CG6570" /gene_synonym="CG6570; Dmel\CG6570; lb; Lb; Lbl; NK?; nkch4; NKch4" /note="CG6570 gene product from transcript CG6570-RA; CG6570-PA; lbl-PA; NK-cluster homeobox 4; lady-bird-late; ladybird" /codon_start=1 /product="ladybird late, isoform A" /protein_id="NP_524434.2" /db_xref="FLYBASE:FBpp0083491" /db_xref="GeneID:42541" /db_xref="FLYBASE:FBgn0008651" /translation="...
Synonym: CG6570; Dmel\CG6570; lb; Lb; Lbl; NK?; nkch4; NKch4
NM_079710.4 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster homothorax (hth), transcript variant I, mRNA. (6340 bp)
misc_feature 1656..1910 /gene="hth" /locus_tag="Dmel_CG17117" /gene_synonym="1323/07; 1422/04; anon-EST:Liang-2.13; CG17117; clone 2.13; Dm-HTH; Dmel\CG17117; dtl; Hth; HTH; hth1; hth2; l(3)05745; l(3)86Ca; Meis1; MEIS1; P53" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" ORIGIN // REFERENCE 1 (bases 1 to 6340) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for...
Synonym: 1323/07; 1422/04; anon-EST:Liang-2.13; CG17117; clone 2.13; Dm-HTH; Dmel\CG17117; dtl; Hth; HTH; hth1; hth2; l(3)05745; l(3)86Ca; Meis1; MEIS1; P53
NM_057229.5 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster ladybird late (lbl), transcript variant C, mRNA. (1803 bp)
ladybird late" /map="93E1-93E1" /db_xref="FLYBASE:FBgn0008651" /db_xref="GeneID:42541" CDS 167..1399 /gene="lbl" /locus_tag="Dmel_CG6570" /gene_synonym="CG6570; Dmel\CG6570; lb; Lb; Lbl; NK?; nkch4; NKch4" /note="CG6570 gene product from transcript CG6570-RC; CG6570-PC; lbl-PC; NK-cluster homeobox 4; lady-bird-late; ladybird" /codon_start=1 /product="ladybird late, isoform C" /protein_id="NP_001262805.1" /db_xref="FLYBASE:FBpp0304711" /db_xref="GeneID:42541" /db_xref="FLYBASE:FBgn0008651" /translation="...
Synonym: CG6570; Dmel\CG6570; lb; Lb; Lbl; NK?; nkch4; NKch4
NM_001275876.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster homothorax (hth), transcript variant F, mRNA. (2462 bp)
misc_feature 1656..1910 /gene="hth" /locus_tag="Dmel_CG17117" /gene_synonym="1323/07; 1422/04; anon-EST:Liang-2.13; CG17117; clone 2.13; Dm-HTH; Dmel\CG17117; dtl; Hth; HTH; hth1; hth2; l(3)05745; l(3)86Ca; Meis1; MEIS1; P53" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" ORIGIN // REFERENCE 1 (bases 1 to 2462) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for...
Synonym: 1323/07; 1422/04; anon-EST:Liang-2.13; CG17117; clone 2.13; Dm-HTH; Dmel\CG17117; dtl; Hth; HTH; hth1; hth2; l(3)05745; l(3)86Ca; Meis1; MEIS1; P53
NM_001031999.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster homothorax (hth), transcript variant E, mRNA. (3868 bp)
misc_feature 2125..2379 /gene="hth" /locus_tag="Dmel_CG17117" /gene_synonym="1323/07; 1422/04; anon-EST:Liang-2.13; CG17117; clone 2.13; Dm-HTH; Dmel\CG17117; dtl; Hth; HTH; hth1; hth2; l(3)05745; l(3)86Ca; Meis1; MEIS1; P53" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:465140" ORIGIN // REFERENCE 1 (bases 1 to 3868) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for...
Synonym: 1323/07; 1422/04; anon-EST:Liang-2.13; CG17117; clone 2.13; Dm-HTH; Dmel\CG17117; dtl; Hth; HTH; hth1; hth2; l(3)05745; l(3)86Ca; Meis1; MEIS1; P53
NM_001014613.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster invected (inv), transcript variant E, mRNA. (4776 bp)
synonym="CG17835; Dmel\CG17835; Engrailed/Invected; er; in; Inv; INV; IV" /note="Region: Homeodomain; pfam00046" /db_xref="CDD:459649" misc_feature 1853..1930 /gene="inv" /locus_tag="Dmel_CG17835" /gene_synonym="CG17835; Dmel\CG17835; Engrailed/Invected; er; in; Inv; INV; IV" /note="Engrailed homeobox C-terminal signature domain; Region: Engrail_1_C_sig; pfam10525" /db_xref="CDD:431338" ORIGIN // REFERENCE 1 (bases 1 to 4776) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M...
Synonym: CG17835; Dmel\CG17835; Engrailed/Invected; er; in; Inv; INV; IV
NM_165838.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster invected (inv), transcript variant B, mRNA. (2261 bp)
synonym="CG17835; Dmel\CG17835; Engrailed/Invected; er; in; Inv; INV; IV" /note="Region: Homeodomain; pfam00046" /db_xref="CDD:459649" misc_feature 1853..1930 /gene="inv" /locus_tag="Dmel_CG17835" /gene_synonym="CG17835; Dmel\CG17835; Engrailed/Invected; er; in; Inv; INV; IV" /note="Engrailed homeobox C-terminal signature domain; Region: Engrail_1_C_sig; pfam10525" /db_xref="CDD:431338" ORIGIN // REFERENCE 1 (bases 1 to 2261) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M...
Synonym: CG17835; Dmel\CG17835; Engrailed/Invected; er; in; Inv; INV; IV
NM_078975.4 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster invected (inv), transcript variant D, mRNA. (3404 bp)
synonym="CG17835; Dmel\CG17835; Engrailed/Invected; er; in; Inv; INV; IV" /note="Region: Homeodomain; pfam00046" /db_xref="CDD:459649" misc_feature 2996..3073 /gene="inv" /locus_tag="Dmel_CG17835" /gene_synonym="CG17835; Dmel\CG17835; Engrailed/Invected; er; in; Inv; INV; IV" /note="Engrailed homeobox C-terminal signature domain; Region: Engrail_1_C_sig; pfam10525" /db_xref="CDD:431338" ORIGIN // REFERENCE 1 (bases 1 to 3404) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M...
Synonym: CG17835; Dmel\CG17835; Engrailed/Invected; er; in; Inv; INV; IV
NM_165839.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster HGTX, transcript variant A (HGTX), mRNA. (3014 bp)
Nk6; nkx6; Nkx6" /map="70E3-70E3" /db_xref="FLYBASE:FBgn0040318" /db_xref="GeneID:53446" CDS 828..2369 /gene="HGTX" /locus_tag="Dmel_CG13475" /gene_synonym="CG13475; CG4745; Dmel\CG13475; dNkx6; Nk6; nkx6; Nkx6" /note="CG13475 gene product from transcript CG13475-RA; CG13475-PA; HGTX-PA; Nk6 homeobox" /codon_start=1 /product="HGTX, isoform A" /protein_id="NP_652614.1" /db_xref="FLYBASE:FBpp0075463" /db_xref="GeneID:53446" /db_xref="FLYBASE:FBgn0040318" /translation="...
Synonym: CG13475; CG4745; Dmel\CG13475; dNkx6; Nk6; nkx6; Nkx6
NM_144357.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster HGTX, transcript variant C (HGTX), mRNA. (3014 bp)
xref="FLYBASE:FBgn0040318" /db_xref="GeneID:53446" CDS 606..2369 /gene="HGTX" /locus_tag="Dmel_CG13475" /gene_synonym="CG13475; CG4745; Dmel\CG13475; dNkx6; Nk6; nkx6; Nkx6" /note="CG13475 gene product from transcript CG13475-RC; non-AUG (AAG) translation initiation; CG13475-PC; HGTX-PC; Nk6 homeobox" /codon_start=1 /transl_except=(pos:606..608,aa:Met) /product="HGTX, isoform C" /protein_id="NP_001368954.1" /db_xref="FLYBASE:FBpp0428200" /db_xref="GeneID:53446" /db_xref="FLYBASE:FBgn0040318" /translation="...
Synonym: CG13475; CG4745; Dmel\CG13475; dNkx6; Nk6; nkx6; Nkx6
NM_001382022.1 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster engrailed (en), transcript variant A, mRNA. (2465 bp)
EnR; Es; spa2; spt; V" /note="Region: Homeodomain; pfam00046" /db_xref="CDD:459649" misc_feature 1747..1839 /gene="en" /locus_tag="Dmel_CG9015" /gene_synonym="153867_at; Apa; CG9015; Dmel\CG9015; En; EN; en1; Eng; Engr; Engrailed; Engrailed/Invected; EnR; Es; spa2; spt; V" /note="Engrailed homeobox C-terminal signature domain; Region: Engrail_1_C_sig; pfam10525" /db_xref="CDD:431338" ORIGIN // REFERENCE 1 (bases 1 to 2465) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M....
Synonym: 153867_at; Apa; CG9015; Dmel\CG9015; En; EN; en1; Eng; Engr; Engrailed; Engrailed/Invected; EnR; Es; spa2; spt; V
NM_078976.4 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster engrailed (en), transcript variant B, mRNA. (2792 bp)
EnR; Es; spa2; spt; V" /note="Region: Homeodomain; pfam00046" /db_xref="CDD:459649" misc_feature 2074..2166 /gene="en" /locus_tag="Dmel_CG9015" /gene_synonym="153867_at; Apa; CG9015; Dmel\CG9015; En; EN; en1; Eng; Engr; Engrailed; Engrailed/Invected; EnR; Es; spa2; spt; V" /note="Engrailed homeobox C-terminal signature domain; Region: Engrail_1_C_sig; pfam10525" /db_xref="CDD:431338" ORIGIN // REFERENCE 1 (bases 1 to 2792) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M....
Synonym: 153867_at; Apa; CG9015; Dmel\CG9015; En; EN; en1; Eng; Engr; Engrailed; Engrailed/Invected; EnR; Es; spa2; spt; V
NM_165841.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster abdominal A (abd-A), transcript variant A, mRNA. (4458 bp)
misc_feature 1991..2059 /gene="abd-A" /locus_tag="Dmel_CG10325" /gene_synonym="abd A; Abd A; abd-a; Abd-A; ABD-A; abda; abdA; Abda; AbdA; abd_a; BX-C; Cbxd; CG10325; Dmabda; DmabdA; Dmel\CG10325; Fab-3; Fab-4; Fub; Hab; iab; iab-2; iab-3; iab-4; iab-5; iab2; iab3; iab4; l(3)89Ec; Uab" /note="Homeobox protein; Region: Abdominal-A; pfam12407" /db_xref="CDD:403567" ORIGIN // REFERENCE 1 (bases 1 to 4458) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase...
Synonym: abd A; Abd A; abd-a; Abd-A; ABD-A; abda; abdA; Abda; AbdA; abd_a; BX-C; Cbxd; CG10325; Dmabda; DmabdA; Dmel\CG10325; Fab-3; Fab-4; Fub; Hab; iab; iab-2; iab-3; iab-4; iab-5; iab2; iab3; iab4; l(3)89Ec; Uab
NM_057345.5 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster abdominal A (abd-A), transcript variant C, mRNA. (4559 bp)
misc_feature 2092..2160 /gene="abd-A" /locus_tag="Dmel_CG10325" /gene_synonym="abd A; Abd A; abd-a; Abd-A; ABD-A; abda; abdA; Abda; AbdA; abd_a; BX-C; Cbxd; CG10325; Dmabda; DmabdA; Dmel\CG10325; Fab-3; Fab-4; Fub; Hab; iab; iab-2; iab-3; iab-4; iab-5; iab2; iab3; iab4; l(3)89Ec; Uab" /note="Homeobox protein; Region: Abdominal-A; pfam12407" /db_xref="CDD:403567" ORIGIN // REFERENCE 1 (bases 1 to 4559) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase...
Synonym: abd A; Abd A; abd-a; Abd-A; ABD-A; abda; abdA; Abda; AbdA; abd_a; BX-C; Cbxd; CG10325; Dmabda; DmabdA; Dmel\CG10325; Fab-3; Fab-4; Fub; Hab; iab; iab-2; iab-3; iab-4; iab-5; iab2; iab3; iab4; l(3)89Ec; Uab
NM_001170161.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster abdominal A (abd-A), transcript variant D, mRNA. (5269 bp)
misc_feature 2389..2457 /gene="abd-A" /locus_tag="Dmel_CG10325" /gene_synonym="abd A; Abd A; abd-a; Abd-A; ABD-A; abda; abdA; Abda; AbdA; abd_a; BX-C; Cbxd; CG10325; Dmabda; DmabdA; Dmel\CG10325; Fab-3; Fab-4; Fub; Hab; iab; iab-2; iab-3; iab-4; iab-5; iab2; iab3; iab4; l(3)89Ec; Uab" /note="Homeobox protein; Region: Abdominal-A; pfam12407" /db_xref="CDD:403567" ORIGIN // REFERENCE 1 (bases 1 to 5269) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase...
Synonym: abd A; Abd A; abd-a; Abd-A; ABD-A; abda; abdA; Abda; AbdA; abd_a; BX-C; Cbxd; CG10325; Dmabda; DmabdA; Dmel\CG10325; Fab-3; Fab-4; Fub; Hab; iab; iab-2; iab-3; iab-4; iab-5; iab2; iab3; iab4; l(3)89Ec; Uab
NM_001260216.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster pou domain motif 3 (pdm3), transcript variant A, mRNA. (4066 bp)
misc_feature 2791..3066 /gene="pdm3" /locus_tag="Dmel_CG42698" /old_locus_tag="Dmel_CG11641" /old_locus_tag="Dmel_CG14755" /gene_synonym="BcDNA:AT16994; CG11641; CG14755; CG42698; Dmel\CG42698; Pdm3" /note="Pou domain - N-terminal to homeobox domain; Region: Pou; cl22952" /db_xref="CDD:473999" misc_feature 3142..3312 /gene="pdm3" /locus_tag="Dmel_CG42698" /old_locus_tag="Dmel_CG11641" /old_locus_tag="Dmel_CG14755" /gene_synonym="BcDNA:AT16994; CG11641; CG14755; CG42698; Dmel\CG42698; Pdm3" /note="Region: Homeodomain; pfam00046" /db_xref="CDD:459649" ORIGIN // REFERENCE 1 (bases 1 to 4066)...
Synonym: BcDNA:AT16994; CG11641; CG14755; CG42698; Dmel\CG42698; Pdm3
NM_136533.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster abdominal A (abd-A), transcript variant B, mRNA. (3935 bp)
misc_feature 1468..1536 /gene="abd-A" /locus_tag="Dmel_CG10325" /gene_synonym="abd A; Abd A; abd-a; Abd-A; ABD-A; abda; abdA; Abda; AbdA; abd_a; BX-C; Cbxd; CG10325; Dmabda; DmabdA; Dmel\CG10325; Fab-3; Fab-4; Fub; Hab; iab; iab-2; iab-3; iab-4; iab-5; iab2; iab3; iab4; l(3)89Ec; Uab" /note="Homeobox protein; Region: Abdominal-A; pfam12407" /db_xref="CDD:403567" ORIGIN // REFERENCE 1 (bases 1 to 3935) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase...
Synonym: abd A; Abd A; abd-a; Abd-A; ABD-A; abda; abdA; Abda; AbdA; abd_a; BX-C; Cbxd; CG10325; Dmabda; DmabdA; Dmel\CG10325; Fab-3; Fab-4; Fub; Hab; iab; iab-2; iab-3; iab-4; iab-5; iab2; iab3; iab4; l(3)89Ec; Uab
NM_169733.5 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : http://ggrna.dbcls.jp/dm/homeobox
lang : en | div : | spe : dm | query_string : homeobox | format : html | download : 

0.000 | 0.000 | search_start;
0.217 | 0.217 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:homeobox)%7C(nt:homeobox)%7C(aa:homeobox))?source=Drosophila melanogaster (fruit fly)?to=0&format=json
0.422 | 0.205 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:homeobox)%7C(nt:homeobox)%7C(aa:homeobox))?source=Drosophila melanogaster (fruit fly)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.427 | 0.005 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]