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2024-04-26 08:38:20, GGRNA : RefSeq release 222 (Jan, 2024)

Summary:

Results:

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Drosophila melanogaster brain-specific homeobox (bsh), transcript variant C, mRNA. (1503 bp)
LOCUS NM_058002 1503 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster brain-specific homeobox (bsh), transcript variant C, mRNA. ACCESSION NM_058002 VERSION NM_058002.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly)...feature 970..1128 /gene="bsh" /locus_tag="Dmel_CG10604" /gene_synonym="Bsh; BSH; bsk; CG10604; Dmel\CG10604; E86; Hox11-310; lambdaE86" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" ORIGIN // REFERENCE 1 (bases 1 to 1503) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A...
Synonym: Bsh; BSH; bsk; CG10604; Dmel\CG10604; E86; Hox11-310; lambdaE86
NM_058002.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster brain-specific homeobox (bsh), transcript variant B, mRNA. (2012 bp)
LOCUS NM_206006 2012 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster brain-specific homeobox (bsh), transcript variant B, mRNA. ACCESSION NM_206006 VERSION NM_206006.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly)...feature 970..1128 /gene="bsh" /locus_tag="Dmel_CG10604" /gene_synonym="Bsh; BSH; bsk; CG10604; Dmel\CG10604; E86; Hox11-310; lambdaE86" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" ORIGIN // REFERENCE 1 (bases 1 to 2012) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A...
Synonym: Bsh; BSH; bsk; CG10604; Dmel\CG10604; E86; Hox11-310; lambdaE86
NM_206006.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster visual system homeobox 1, transcript variant B (Vsx1), mRNA. (3633 bp)
LOCUS NM_001297969 3633 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster visual system homeobox 1, transcript variant B (Vsx1), mRNA. ACCESSION NM_001297969 VERSION NM_001297969.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster...Vsx1" /locus_tag="Dmel_CG4136" /gene_synonym="CG4136; Chx1; dChx1; Dchx1; DChx1; Dmel\CG4136; dVsx1; DVSX1; lincRNA.S8688; Vsx; Vsx-1" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" ORIGIN // REFERENCE 1 (bases 1 to 3633) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A...
Synonym: CG4136; Chx1; dChx1; Dchx1; DChx1; Dmel\CG4136; dVsx1; DVSX1; lincRNA.S8688; Vsx; Vsx-1
NM_001297969.1 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster visual system homeobox 2, transcript variant A (Vsx2), mRNA. (2358 bp)
LOCUS NM_001038743 2358 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster visual system homeobox 2, transcript variant A (Vsx2), mRNA. ACCESSION NM_001038743 VERSION NM_001038743.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster...Vsx2" /locus_tag="Dmel_CG33980" /gene_synonym="CG15781; CG15782; CG15783; CG33980; Chx2; dChx2; DChx2; Dmel\CG33980; dVsx2; Vsx; vsx2" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(918..920,927..929,1047..1049,1056..1061,1068..1070) /gene="Vsx2" /locus...
Synonym: CG15781; CG15782; CG15783; CG33980; Chx2; dChx2; DChx2; Dmel\CG33980; dVsx2; Vsx; vsx2
NM_001038743.1 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster visual system homeobox 2, transcript variant B (Vsx2), mRNA. (2373 bp)
LOCUS NM_001297968 2373 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster visual system homeobox 2, transcript variant B (Vsx2), mRNA. ACCESSION NM_001297968 VERSION NM_001297968.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster...Vsx2" /locus_tag="Dmel_CG33980" /gene_synonym="CG15781; CG15782; CG15783; CG33980; Chx2; dChx2; DChx2; Dmel\CG33980; dVsx2; Vsx; vsx2" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(918..920,927..929,1047..1049,1056..1061,1068..1070) /gene="Vsx2" /locus...
Synonym: CG15781; CG15782; CG15783; CG33980; Chx2; dChx2; DChx2; Dmel\CG33980; dVsx2; Vsx; vsx2
NM_001297968.1 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster visual system homeobox 1, transcript variant A (Vsx1), mRNA. (2983 bp)
LOCUS NM_132004 2983 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster visual system homeobox 1, transcript variant A (Vsx1), mRNA. ACCESSION NM_132004 VERSION NM_132004.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly)...Vsx1" /locus_tag="Dmel_CG4136" /gene_synonym="CG4136; Chx1; dChx1; Dchx1; DChx1; Dmel\CG4136; dVsx1; DVSX1; lincRNA.S8688; Vsx; Vsx-1" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" ORIGIN // REFERENCE 1 (bases 1 to 2983) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A...
Synonym: CG4136; Chx1; dChx1; Dchx1; DChx1; Dmel\CG4136; dVsx1; DVSX1; lincRNA.S8688; Vsx; Vsx-1
NM_132004.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster Ods-site homeobox (OdsH), mRNA. (1289 bp)
LOCUS NM_078665 1289 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster Ods-site homeobox (OdsH), mRNA. ACCESSION NM_078665 VERSION NM_078665.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM Drosophila...CDD:238039" misc_feature 541..699 /gene="OdsH" /locus_tag="Dmel_CG6352" /gene_synonym="CG6352; Dmel\CG6352; odsh; odsH; Odsh; OdsH[mel]" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" ORIGIN // REFERENCE 1 (bases 1 to 1289) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A...
Synonym: CG6352; Dmel\CG6352; odsh; odsH; Odsh; OdsH[mel]
NM_078665.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster hematopoietically expressed homeobox (HHEX), mRNA. (1267 bp)
LOCUS NM_142681 1267 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster hematopoietically expressed homeobox (HHEX), mRNA. ACCESSION NM_142681 VERSION NM_142681.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM...other site" /db_xref="CDD:238039" misc_feature 841..993 /gene="HHEX" /locus_tag="Dmel_CG7056" /gene_synonym="CG7056; dHHEX; Dmel\CG7056" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" ORIGIN // REFERENCE 1 (bases 1 to 1267) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A...
Synonym: CG7056; dHHEX; Dmel\CG7056
NM_142681.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster LIM homeobox 1 (Lim1), transcript variant B, mRNA. (2708 bp)
LOCUS NM_001272429 2708 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster LIM homeobox 1 (Lim1), transcript variant B, mRNA. ACCESSION NM_001272429 VERSION NM_001272429.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly)...locus_tag="Dmel_CG11354" /gene_synonym="BcDNA:GH04929; CG10760; CG11354; dlim-1; dlim1; dLim1; Dlim1; Dmel\CG11354; Lim; lim1; LIM1" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(452..454,461..463,581..583,590..595,602..604) /gene="Lim1" /locus_tag="...
Synonym: BcDNA:GH04929; CG10760; CG11354; dlim-1; dlim1; dLim1; Dlim1; Dmel\CG11354; Lim; lim1; LIM1
NM_001272429.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster H6-like-homeobox (Hmx), transcript variant E, mRNA. (3384 bp)
LOCUS NM_001300447 3384 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster H6-like-homeobox (Hmx), transcript variant E, mRNA. ACCESSION NM_001300447 VERSION NM_001300447.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly)...locus_tag="Dmel_CG5829" /old_locus_tag="Dmel_CG5832" /gene_synonym="CG18139; CG34419; CG43748; CG5829; CG5832; DHmx; Dmel\CG43748; hmx" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(1845..1847,1854..1856,1974..1976,1983..1988, 1995..1997) /gene="Hmx" /...
Synonym: CG18139; CG34419; CG43748; CG5829; CG5832; DHmx; Dmel\CG43748; hmx
NM_001300447.1 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster H6-like-homeobox (Hmx), transcript variant C, mRNA. (2691 bp)
LOCUS NM_169763 2691 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster H6-like-homeobox (Hmx), transcript variant C, mRNA. ACCESSION NM_169763 VERSION NM_169763.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM...locus_tag="Dmel_CG5829" /old_locus_tag="Dmel_CG5832" /gene_synonym="CG18139; CG34419; CG43748; CG5829; CG5832; DHmx; Dmel\CG43748; hmx" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(1845..1847,1854..1856,1974..1976,1983..1988, 1995..1997) /gene="Hmx" /...
Synonym: CG18139; CG34419; CG43748; CG5829; CG5832; DHmx; Dmel\CG43748; hmx
NM_169763.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster retinal homeobox (Rx), mRNA. (3267 bp)
DRx; E97; PPH17; rx; W60; wom" /note="Retinal Homeobox" /map="57B4-57B4" /db_xref="FLYBASE:FBgn0020617" /db_xref="GeneID:37367" CDS 297..3010 /gene="Rx" /locus_tag="Dmel_CG10052" /gene_synonym="bk50; CG10052; Dmel\CG10052; drx; Drx; DRx; E97; PPH17; rx; W60; wom" /inference="similar to RNA sequence, mRNA (same species):INSD:AJ223300.1" /exception="annotated by transcript or proteomic data" /note="CG10052 gene product from transcript CG10052-RB; frameshift; CG10052-PB; Rx-PB; drosophila Rx; wombat" /codon_start=1 /product="retinal homeobox" /protein_id="NP_726006.3" /db_xref="FLYBASE:...
Synonym: bk50; CG10052; Dmel\CG10052; drx; Drx; DRx; E97; PPH17; rx; W60; wom
NM_166413.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster dorsal root ganglia homeobox, transcript variant F (Drgx), mRNA. (2989 bp)
LOCUS NM_001298663 2989 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster dorsal root ganglia homeobox, transcript variant F (Drgx), mRNA. ACCESSION NM_001298663 VERSION NM_001298663.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster...old_locus_tag="CG2808" /old_locus_tag="Dmel_CG10017" /old_locus_tag="Dmel_CG2808" /gene_synonym="CG10017; CG2808; CG34340; Dmel\CG34340" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature 1871..1927 /gene="Drgx" /locus_tag="Dmel_CG34340" /old_locus_tag="...
Synonym: CG10017; CG2808; CG34340; Dmel\CG34340
NM_001298663.1 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster H6-like-homeobox (Hmx), transcript variant D, mRNA. (2691 bp)
LOCUS NM_001275745 2691 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster H6-like-homeobox (Hmx), transcript variant D, mRNA. ACCESSION NM_001275745 VERSION NM_001275745.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly)...locus_tag="Dmel_CG5829" /old_locus_tag="Dmel_CG5832" /gene_synonym="CG18139; CG34419; CG43748; CG5829; CG5832; DHmx; Dmel\CG43748; hmx" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(1845..1847,1854..1856,1974..1976,1983..1988, 1995..1997) /gene="Hmx" /...
Synonym: CG18139; CG34419; CG43748; CG5829; CG5832; DHmx; Dmel\CG43748; hmx
NM_001275745.1 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster dorsal root ganglia homeobox, transcript variant E (Drgx), mRNA. (2612 bp)
LOCUS NM_001103605 2612 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster dorsal root ganglia homeobox, transcript variant E (Drgx), mRNA. ACCESSION NM_001103605 VERSION NM_001103605.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster...old_locus_tag="CG2808" /old_locus_tag="Dmel_CG10017" /old_locus_tag="Dmel_CG2808" /gene_synonym="CG10017; CG2808; CG34340; Dmel\CG34340" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature 1871..1927 /gene="Drgx" /locus_tag="Dmel_CG34340" /old_locus_tag="...
Synonym: CG10017; CG2808; CG34340; Dmel\CG34340
NM_001103605.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster LIM homeobox transcription factor 1 alpha (Lmx1a), transcript variant C, mRNA. (2640 bp)
LOCUS NM_001274825 2640 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster LIM homeobox transcription factor 1 alpha (Lmx1a), transcript variant C, mRNA. ACCESSION NM_001274825 VERSION NM_001274825.1 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE...misc_feature 1514..1675 /gene="Lmx1a" /locus_tag="Dmel_CG32105" /gene_synonym="CG10432; CG17615; CG32105; dLmx1a; Dmel\CG32105" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(1514..1516,1523..1525,1643..1645,1652..1657, 1664..1666) /gene="Lmx1a" /locus_...
Synonym: CG10432; CG17615; CG32105; dLmx1a; Dmel\CG32105
NM_001274825.1 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster LIM homeobox transcription factor 1 alpha (Lmx1a), transcript variant B, mRNA. (2643 bp)
LOCUS NM_168497 2643 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster LIM homeobox transcription factor 1 alpha (Lmx1a), transcript variant B, mRNA. ACCESSION NM_168497 VERSION NM_168497.2 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila...misc_feature 1517..1678 /gene="Lmx1a" /locus_tag="Dmel_CG32105" /gene_synonym="CG10432; CG17615; CG32105; dLmx1a; Dmel\CG32105" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(1517..1519,1526..1528,1646..1648,1655..1660, 1667..1669) /gene="Lmx1a" /locus_...
Synonym: CG10432; CG17615; CG32105; dLmx1a; Dmel\CG32105
NM_168497.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster LIM homeobox 1 (Lim1), transcript variant A, mRNA. (3081 bp)
LOCUS NM_132277 3081 bp mRNA linear INV 26-DEC-2023 DEFINITION Drosophila melanogaster LIM homeobox 1 (Lim1), transcript variant A, mRNA. ACCESSION NM_132277 VERSION NM_132277.3 DBLINK BioProject: PRJNA164 BioSample: SAMN02803731 KEYWORDS RefSeq. SOURCE Drosophila melanogaster (fruit fly) ORGANISM...locus_tag="Dmel_CG11354" /gene_synonym="BcDNA:GH04929; CG10760; CG11354; dlim-1; dlim1; dLim1; Dlim1; Dmel\CG11354; Lim; lim1; LIM1" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(1546..1548,1555..1557,1675..1677,1684..1689, 1696..1698) /gene="Lim1" /...
Synonym: BcDNA:GH04929; CG10760; CG11354; dlim-1; dlim1; dLim1; Dlim1; Dmel\CG11354; Lim; lim1; LIM1
NM_132277.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster drop (Dr), mRNA. (2552 bp)
msh1; Msx" /note="CG1897 gene product from transcript CG1897-RA; CG1897-PA; Dr-PA; muscle-specific homeodomain 1; Dr-distal; muscle segment homeobox; lottchen; muscle specific homeobox" /codon_start=1 /product="drop" /protein_id="NP_477324.1" /db_xref="FLYBASE:FBpp0084807" /db_xref="GeneID:45285" /...locus_tag="Dmel_CG1897" /gene_synonym="153515_at; 99B; CG1897; Dmel\CG1897; Dr/msh; Dr/Msh; l(3)FA30; ltt; msh; Msh; msh-1; msh1; Msx" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(1520..1522,1529..1531,1649..1651,1658..1663, 1670..1672) /gene="Dr" /...
Synonym: 153515_at; 99B; CG1897; Dmel\CG1897; Dr/msh; Dr/Msh; l(3)FA30; ltt; msh; Msh; msh-1; msh1; Msx
NM_057976.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster ladybird late (lbl), transcript variant A, mRNA. (1855 bp)
CG6570; Dmel\CG6570; lb; Lb; Lbl; NK?; nkch4; NKch4" /note="CG6570 gene product from transcript CG6570-RA; CG6570-PA; lbl-PA; NK-cluster homeobox 4; lady-bird-late; ladybird" /codon_start=1 /product="ladybird late, isoform A" /protein_id="NP_524434.2" /db_xref="FLYBASE:FBpp0083491" /db_xref="GeneID...misc_feature 926..1087 /gene="lbl" /locus_tag="Dmel_CG6570" /gene_synonym="CG6570; Dmel\CG6570; lb; Lb; Lbl; NK?; nkch4; NKch4" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(926..928,935..937,1055..1057,1064..1069,1076..1078) /gene="lbl" /locus_tag="...
Synonym: CG6570; Dmel\CG6570; lb; Lb; Lbl; NK?; nkch4; NKch4
NM_079710.4 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster ladybird late (lbl), transcript variant C, mRNA. (1803 bp)
CG6570; Dmel\CG6570; lb; Lb; Lbl; NK?; nkch4; NKch4" /note="CG6570 gene product from transcript CG6570-RC; CG6570-PC; lbl-PC; NK-cluster homeobox 4; lady-bird-late; ladybird" /codon_start=1 /product="ladybird late, isoform C" /protein_id="NP_001262805.1" /db_xref="FLYBASE:FBpp0304711" /db_xref="...misc_feature 926..1087 /gene="lbl" /locus_tag="Dmel_CG6570" /gene_synonym="CG6570; Dmel\CG6570; lb; Lb; Lbl; NK?; nkch4; NKch4" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(926..928,935..937,1055..1057,1064..1069,1076..1078) /gene="lbl" /locus_tag="...
Synonym: CG6570; Dmel\CG6570; lb; Lb; Lbl; NK?; nkch4; NKch4
NM_001275876.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster invected (inv), transcript variant E, mRNA. (4776 bp)
Invected; er; in; Inv; INV; IV" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(1688..1690,1697..1699,1817..1819,1826..1831, 1838..1840) /gene="inv" /locus_tag="Dmel_CG17835" /gene_synonym="CG17835; Dmel\CG17835; Engrailed/Invected; er; in; Inv; INV; IV" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 1853..1930 /gene="inv" /locus_tag="Dmel_CG17835" /gene_synonym="CG17835; Dmel\CG17835; Engrailed/Invected; er; in; Inv; INV; IV" /note="Engrailed homeobox C-terminal signature domain; Region:...
Synonym: CG17835; Dmel\CG17835; Engrailed/Invected; er; in; Inv; INV; IV
NM_165838.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster invected (inv), transcript variant B, mRNA. (2261 bp)
Invected; er; in; Inv; INV; IV" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(1688..1690,1697..1699,1817..1819,1826..1831, 1838..1840) /gene="inv" /locus_tag="Dmel_CG17835" /gene_synonym="CG17835; Dmel\CG17835; Engrailed/Invected; er; in; Inv; INV; IV" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 1853..1930 /gene="inv" /locus_tag="Dmel_CG17835" /gene_synonym="CG17835; Dmel\CG17835; Engrailed/Invected; er; in; Inv; INV; IV" /note="Engrailed homeobox C-terminal signature domain; Region:...
Synonym: CG17835; Dmel\CG17835; Engrailed/Invected; er; in; Inv; INV; IV
NM_078975.4 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster invected (inv), transcript variant D, mRNA. (3404 bp)
Invected; er; in; Inv; INV; IV" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(2831..2833,2840..2842,2960..2962,2969..2974, 2981..2983) /gene="inv" /locus_tag="Dmel_CG17835" /gene_synonym="CG17835; Dmel\CG17835; Engrailed/Invected; er; in; Inv; INV; IV" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 2996..3073 /gene="inv" /locus_tag="Dmel_CG17835" /gene_synonym="CG17835; Dmel\CG17835; Engrailed/Invected; er; in; Inv; INV; IV" /note="Engrailed homeobox C-terminal signature domain; Region:...
Synonym: CG17835; Dmel\CG17835; Engrailed/Invected; er; in; Inv; INV; IV
NM_165839.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster HGTX, transcript variant A (HGTX), mRNA. (3014 bp)
synonym="CG13475; CG4745; Dmel\CG13475; dNkx6; Nk6; nkx6; Nkx6" /note="CG13475 gene product from transcript CG13475-RA; CG13475-PA; HGTX-PA; Nk6 homeobox" /codon_start=1 /product="HGTX, isoform A" /protein_id="NP_652614.1" /db_xref="FLYBASE:FBpp0075463" /db_xref="GeneID:53446" /db_xref="FLYBASE:...misc_feature 2010..2174 /gene="HGTX" /locus_tag="Dmel_CG13475" /gene_synonym="CG13475; CG4745; Dmel\CG13475; dNkx6; Nk6; nkx6; Nkx6" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:395001" misc_feature order(2010..2012,2019..2021,2139..2141,2148..2153, 2160..2162) /gene="HGTX" /...
Synonym: CG13475; CG4745; Dmel\CG13475; dNkx6; Nk6; nkx6; Nkx6
NM_144357.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster Zn finger homeodomain 2 (zfh2), transcript variant A, mRNA. (10619 bp)
synonym="CG1449; Dmel\CG1449; zfh-2; Zfh-2; ZFH-2; Zfh2; ZFH2" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 6889..7050 /gene="zfh2" /locus_tag="Dmel_CG1449" /gene_synonym="CG1449; Dmel\CG1449; zfh-2; Zfh-2; ZFH-2; Zfh2; ZFH2" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:395001" misc_feature order(8698..8712,8716..8718,8767..8769,8785..8787, 8824..8826,8830..8835,8842..8847,8851..8859,8863..8868) /gene="zfh2" /locus_tag="Dmel_CG1449" /gene_synonym="CG1449; Dmel\CG1449; zfh-2; Zfh-2; ZFH-2; Zfh2; ZFH2" /note="DNA...
Synonym: CG1449; Dmel\CG1449; zfh-2; Zfh-2; ZFH-2; Zfh2; ZFH2
NM_079884.5 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster Zn finger homeodomain 2 (zfh2), transcript variant B, mRNA. (11695 bp)
synonym="CG1449; Dmel\CG1449; zfh-2; Zfh-2; ZFH-2; Zfh2; ZFH2" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 6883..7041 /gene="zfh2" /locus_tag="Dmel_CG1449" /gene_synonym="CG1449; Dmel\CG1449; zfh-2; Zfh-2; ZFH-2; Zfh2; ZFH2" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(8692..8706,8710..8712,8761..8763,8779..8781, 8818..8820,8824..8829,8836..8841,8845..8853,8857..8862) /gene="zfh2" /locus_tag="Dmel_CG1449" /gene_synonym="CG1449; Dmel\CG1449; zfh-2; Zfh-2; ZFH-2; Zfh2; ZFH2" /note="DNA...
Synonym: CG1449; Dmel\CG1449; zfh-2; Zfh-2; ZFH-2; Zfh2; ZFH2
NM_001258496.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster HGTX, transcript variant C (HGTX), mRNA. (3014 bp)
dNkx6; Nk6; nkx6; Nkx6" /note="CG13475 gene product from transcript CG13475-RC; non-AUG (AAG) translation initiation; CG13475-PC; HGTX-PC; Nk6 homeobox" /codon_start=1 /transl_except=(pos:606..608,aa:Met) /product="HGTX, isoform C" /protein_id="NP_001368954.1" /db_xref="FLYBASE:FBpp0428200" /db_xref...misc_feature 2010..2171 /gene="HGTX" /locus_tag="Dmel_CG13475" /gene_synonym="CG13475; CG4745; Dmel\CG13475; dNkx6; Nk6; nkx6; Nkx6" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(2010..2012,2019..2021,2139..2141,2148..2153, 2160..2162) /gene="HGTX" /...
Synonym: CG13475; CG4745; Dmel\CG13475; dNkx6; Nk6; nkx6; Nkx6
NM_001382022.1 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster engrailed (en), transcript variant A, mRNA. (2465 bp)
ion: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(1582..1584,1591..1593,1711..1713,1720..1725, 1732..1734) /gene="en" /locus_tag="Dmel_CG9015" /gene_synonym="153867_at; Apa; CG9015; Dmel\CG9015; En; EN; en1; Eng; Engr; Engrailed; Engrailed/Invected; EnR; Es; spa2; spt; V" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 1747..1839 /gene="en" /locus_tag="Dmel_CG9015" /gene_synonym="153867_at; Apa; CG9015; Dmel\CG9015; En; EN; en1; Eng; Engr; Engrailed; Engrailed/Invected; EnR; Es; spa2; spt; V" /note="Engrailed homeobox C-...
Synonym: 153867_at; Apa; CG9015; Dmel\CG9015; En; EN; en1; Eng; Engr; Engrailed; Engrailed/Invected; EnR; Es; spa2; spt; V
NM_078976.4 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster engrailed (en), transcript variant B, mRNA. (2792 bp)
ion: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(1909..1911,1918..1920,2038..2040,2047..2052, 2059..2061) /gene="en" /locus_tag="Dmel_CG9015" /gene_synonym="153867_at; Apa; CG9015; Dmel\CG9015; En; EN; en1; Eng; Engr; Engrailed; Engrailed/Invected; EnR; Es; spa2; spt; V" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" misc_feature 2074..2166 /gene="en" /locus_tag="Dmel_CG9015" /gene_synonym="153867_at; Apa; CG9015; Dmel\CG9015; En; EN; en1; Eng; Engr; Engrailed; Engrailed/Invected; EnR; Es; spa2; spt; V" /note="Engrailed homeobox C-...
Synonym: 153867_at; Apa; CG9015; Dmel\CG9015; En; EN; en1; Eng; Engr; Engrailed; Engrailed/Invected; EnR; Es; spa2; spt; V
NM_165841.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster homothorax (hth), transcript variant A, mRNA. (4226 bp)
misc_feature 1656..1910 /gene="hth" /locus_tag="Dmel_CG17117" /gene_synonym="1323/07; 1422/04; anon-EST:Liang-2.13; CG17117; clone 2.13; Dm-HTH; Dmel\CG17117; dtl; Hth; HTH; hth1; hth2; l(3)05745; l(3)86Ca; Meis1; MEIS1; P53" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:435375" misc_feature order(2331..2342,2346..2348,2406..2408,2424..2426, 2463..2465,2469..2474,2481..2486,2490..2498) /gene="hth" /locus_tag="Dmel_CG17117" /gene_synonym="1323/07; 1422/04; anon-EST:Liang-2.13; CG17117; clone 2.13; Dm-HTH; Dmel\CG17117; dtl; Hth; HTH; hth1; hth2; l...
Synonym: 1323/07; 1422/04; anon-EST:Liang-2.13; CG17117; clone 2.13; Dm-HTH; Dmel\CG17117; dtl; Hth; HTH; hth1; hth2; l(3)05745; l(3)86Ca; Meis1; MEIS1; P53
NM_057230.6 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster homothorax (hth), transcript variant C, mRNA. (6557 bp)
misc_feature 1656..1910 /gene="hth" /locus_tag="Dmel_CG17117" /gene_synonym="1323/07; 1422/04; anon-EST:Liang-2.13; CG17117; clone 2.13; Dm-HTH; Dmel\CG17117; dtl; Hth; HTH; hth1; hth2; l(3)05745; l(3)86Ca; Meis1; MEIS1; P53" /note="N-terminal of Homeobox Meis and PKNOX1; Region: Meis_PKNOX_N; pfam16493" /db_xref="CDD:435375" misc_feature order(2376..2387,2391..2393,2451..2453,2469..2471, 2508..2510,2514..2519,2526..2531,2535..2543) /gene="hth" /locus_tag="Dmel_CG17117" /gene_synonym="1323/07; 1422/04; anon-EST:Liang-2.13; CG17117; clone 2.13; Dm-HTH; Dmel\CG17117; dtl; Hth; HTH; hth1; hth2; l...
Synonym: 1323/07; 1422/04; anon-EST:Liang-2.13; CG17117; clone 2.13; Dm-HTH; Dmel\CG17117; dtl; Hth; HTH; hth1; hth2; l(3)05745; l(3)86Ca; Meis1; MEIS1; P53
NM_057228.5 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster pou domain motif 3 (pdm3), transcript variant A, mRNA. (4066 bp)
to homeobox domain; Region: Pou; cl22952" /db_xref="CDD:419906" misc_feature order(3142..3156,3160..3162,3211..3213,3229..3231, 3268..3270,3274..3279,3286..3291,3295..3303,3307..3312) /gene="pdm3" /locus_tag="Dmel_CG42698" /gene_synonym="BcDNA:AT16994; CG11641; CG14755; CG42698; Dmel\CG42698; Pdm3" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:238039" misc_feature 3148..3312 /gene="pdm3" /locus_tag="Dmel_CG42698" /old_locus_tag="Dmel_CG11641" /old_locus_tag="Dmel_CG14755" /gene_synonym="BcDNA:AT16994; CG11641; CG14755; CG42698; Dmel\CG42698; Pdm3" /note="Homeobox domain; Region:...
Synonym: BcDNA:AT16994; CG11641; CG14755; CG42698; Dmel\CG42698; Pdm3
NM_136533.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster abdominal A (abd-A), transcript variant A, mRNA. (4458 bp)
misc_feature 1829..1987 /gene="abd-A" /locus_tag="Dmel_CG10325" /gene_synonym="abd A; Abd A; abd-a; Abd-A; ABD-A; abda; abdA; Abda; AbdA; abd_a; BX-C; Cbxd; CG10325; Dmabda; DmabdA; Dmel\CG10325; Fab-3; Fab-4; Fub; Hab; iab; iab-2; iab-3; iab-4; iab-5; iab2; iab3; iab4; l(3)89Ec; Uab" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature 1991..2059 /gene="abd-A" /locus_tag="Dmel_CG10325" /gene_synonym="abd A; Abd A; abd-a; Abd-A; ABD-A; abda; abdA; Abda; AbdA; abd_a; BX-C; Cbxd; CG10325; Dmabda; DmabdA; Dmel\CG10325; Fab-3; Fab-4; Fub; Hab; iab; iab-2; iab-3;...
Synonym: abd A; Abd A; abd-a; Abd-A; ABD-A; abda; abdA; Abda; AbdA; abd_a; BX-C; Cbxd; CG10325; Dmabda; DmabdA; Dmel\CG10325; Fab-3; Fab-4; Fub; Hab; iab; iab-2; iab-3; iab-4; iab-5; iab2; iab3; iab4; l(3)89Ec; Uab
NM_057345.5 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster abdominal A (abd-A), transcript variant C, mRNA. (4559 bp)
misc_feature 1930..2088 /gene="abd-A" /locus_tag="Dmel_CG10325" /gene_synonym="abd A; Abd A; abd-a; Abd-A; ABD-A; abda; abdA; Abda; AbdA; abd_a; BX-C; Cbxd; CG10325; Dmabda; DmabdA; Dmel\CG10325; Fab-3; Fab-4; Fub; Hab; iab; iab-2; iab-3; iab-4; iab-5; iab2; iab3; iab4; l(3)89Ec; Uab" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature 2092..2160 /gene="abd-A" /locus_tag="Dmel_CG10325" /gene_synonym="abd A; Abd A; abd-a; Abd-A; ABD-A; abda; abdA; Abda; AbdA; abd_a; BX-C; Cbxd; CG10325; Dmabda; DmabdA; Dmel\CG10325; Fab-3; Fab-4; Fub; Hab; iab; iab-2; iab-3;...
Synonym: abd A; Abd A; abd-a; Abd-A; ABD-A; abda; abdA; Abda; AbdA; abd_a; BX-C; Cbxd; CG10325; Dmabda; DmabdA; Dmel\CG10325; Fab-3; Fab-4; Fub; Hab; iab; iab-2; iab-3; iab-4; iab-5; iab2; iab3; iab4; l(3)89Ec; Uab
NM_001170161.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster abdominal A (abd-A), transcript variant D, mRNA. (5269 bp)
misc_feature 2227..2385 /gene="abd-A" /locus_tag="Dmel_CG10325" /gene_synonym="abd A; Abd A; abd-a; Abd-A; ABD-A; abda; abdA; Abda; AbdA; abd_a; BX-C; Cbxd; CG10325; Dmabda; DmabdA; Dmel\CG10325; Fab-3; Fab-4; Fub; Hab; iab; iab-2; iab-3; iab-4; iab-5; iab2; iab3; iab4; l(3)89Ec; Uab" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature 2389..2457 /gene="abd-A" /locus_tag="Dmel_CG10325" /gene_synonym="abd A; Abd A; abd-a; Abd-A; ABD-A; abda; abdA; Abda; AbdA; abd_a; BX-C; Cbxd; CG10325; Dmabda; DmabdA; Dmel\CG10325; Fab-3; Fab-4; Fub; Hab; iab; iab-2; iab-3;...
Synonym: abd A; Abd A; abd-a; Abd-A; ABD-A; abda; abdA; Abda; AbdA; abd_a; BX-C; Cbxd; CG10325; Dmabda; DmabdA; Dmel\CG10325; Fab-3; Fab-4; Fub; Hab; iab; iab-2; iab-3; iab-4; iab-5; iab2; iab3; iab4; l(3)89Ec; Uab
NM_001260216.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster pou domain motif 3 (pdm3), transcript variant E, mRNA. (5099 bp)
to homeobox domain; Region: Pou; cl22952" /db_xref="CDD:451464" misc_feature order(4175..4189,4193..4195,4244..4246,4262..4264, 4301..4303,4307..4312,4319..4324,4328..4336,4340..4345) /gene="pdm3" /locus_tag="Dmel_CG42698" /gene_synonym="BcDNA:AT16994; CG11641; CG14755; CG42698; Dmel\CG42698; Pdm3" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:238039" misc_feature 4181..4342 /gene="pdm3" /locus_tag="Dmel_CG42698" /old_locus_tag="Dmel_CG11641" /old_locus_tag="Dmel_CG14755" /gene_synonym="BcDNA:AT16994; CG11641; CG14755; CG42698; Dmel\CG42698; Pdm3" /note="Homeobox domain; Region:...
Synonym: BcDNA:AT16994; CG11641; CG14755; CG42698; Dmel\CG42698; Pdm3
NM_001299264.1 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster abdominal A (abd-A), transcript variant B, mRNA. (3935 bp)
misc_feature 1306..1464 /gene="abd-A" /locus_tag="Dmel_CG10325" /gene_synonym="abd A; Abd A; abd-a; Abd-A; ABD-A; abda; abdA; Abda; AbdA; abd_a; BX-C; Cbxd; CG10325; Dmabda; DmabdA; Dmel\CG10325; Fab-3; Fab-4; Fub; Hab; iab; iab-2; iab-3; iab-4; iab-5; iab2; iab3; iab4; l(3)89Ec; Uab" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature 1468..1536 /gene="abd-A" /locus_tag="Dmel_CG10325" /gene_synonym="abd A; Abd A; abd-a; Abd-A; ABD-A; abda; abdA; Abda; AbdA; abd_a; BX-C; Cbxd; CG10325; Dmabda; DmabdA; Dmel\CG10325; Fab-3; Fab-4; Fub; Hab; iab; iab-2; iab-3;...
Synonym: abd A; Abd A; abd-a; Abd-A; ABD-A; abda; abdA; Abda; AbdA; abd_a; BX-C; Cbxd; CG10325; Dmabda; DmabdA; Dmel\CG10325; Fab-3; Fab-4; Fub; Hab; iab; iab-2; iab-3; iab-4; iab-5; iab2; iab3; iab4; l(3)89Ec; Uab
NM_169733.5 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster pou domain motif 3 (pdm3), transcript variant C, mRNA. (5153 bp)
to homeobox domain; Region: Pou; cl22952" /db_xref="CDD:451464" misc_feature order(4229..4243,4247..4249,4298..4300,4316..4318, 4355..4357,4361..4366,4373..4378,4382..4390,4394..4399) /gene="pdm3" /locus_tag="Dmel_CG42698" /gene_synonym="BcDNA:AT16994; CG11641; CG14755; CG42698; Dmel\CG42698; Pdm3" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:238039" misc_feature 4235..4396 /gene="pdm3" /locus_tag="Dmel_CG42698" /old_locus_tag="Dmel_CG11641" /old_locus_tag="Dmel_CG14755" /gene_synonym="BcDNA:AT16994; CG11641; CG14755; CG42698; Dmel\CG42698; Pdm3" /note="Homeobox domain; Region:...
Synonym: BcDNA:AT16994; CG11641; CG14755; CG42698; Dmel\CG42698; Pdm3
NM_001144145.4 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster pou domain motif 3 (pdm3), transcript variant F, mRNA. (5156 bp)
to homeobox domain; Region: Pou; cl22952" /db_xref="CDD:451464" misc_feature order(4232..4246,4250..4252,4301..4303,4319..4321, 4358..4360,4364..4369,4376..4381,4385..4393,4397..4402) /gene="pdm3" /locus_tag="Dmel_CG42698" /gene_synonym="BcDNA:AT16994; CG11641; CG14755; CG42698; Dmel\CG42698; Pdm3" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:238039" misc_feature 4238..4399 /gene="pdm3" /locus_tag="Dmel_CG42698" /old_locus_tag="Dmel_CG11641" /old_locus_tag="Dmel_CG14755" /gene_synonym="BcDNA:AT16994; CG11641; CG14755; CG42698; Dmel\CG42698; Pdm3" /note="Homeobox domain; Region:...
Synonym: BcDNA:AT16994; CG11641; CG14755; CG42698; Dmel\CG42698; Pdm3
NM_001201956.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster Zn finger homeodomain 1 (zfh1), transcript variant B, mRNA. (6522 bp)
CG1322-RB; CG1322-PB; zfh1-PB; zinc finger homeodomain protein-1; zinc-finger homeodomain1; Zinc-finger homeodomain protein 1; zinc-finger homeobox gene; zinc finger homeodomain-1; Zn homeodomain 1; zinc finger homeodomain 1" /codon_start=1 /product="Zn finger homeodomain 1, isoform B" /protein_id="...zfh1" /locus_tag="Dmel_CG1322" /gene_synonym="CG1322; Dmel\CG1322; l(3)00865; zfh-1; Zfh-1; ZFH-1; Zfh1; ZFh1; ZFH1; Zfh1a; zfl-1; zhf1" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature 3263..3325 /gene="zfh1" /locus_tag="Dmel_CG1322" /gene_synonym="CG1322;...
Synonym: CG1322; Dmel\CG1322; l(3)00865; zfh-1; Zfh-1; ZFH-1; Zfh1; ZFh1; ZFH1; Zfh1a; zfl-1; zhf1
NM_057502.5 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster Zn finger homeodomain 1 (zfh1), transcript variant E, mRNA. (6522 bp)
CG1322-RE; CG1322-PE; zfh1-PE; zinc finger homeodomain protein-1; zinc-finger homeodomain1; Zinc-finger homeodomain protein 1; zinc-finger homeobox gene; zinc finger homeodomain-1; Zn homeodomain 1; zinc finger homeodomain 1" /codon_start=1 /transl_except=(pos:3521..3523,aa:OTHER) /product="Zn...zfh1" /locus_tag="Dmel_CG1322" /gene_synonym="CG1322; Dmel\CG1322; l(3)00865; zfh-1; Zfh-1; ZFH-1; Zfh1; ZFh1; ZFH1; Zfh1a; zfl-1; zhf1" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature 3263..3325 /gene="zfh1" /locus_tag="Dmel_CG1322" /gene_synonym="CG1322;...
Synonym: CG1322; Dmel\CG1322; l(3)00865; zfh-1; Zfh-1; ZFH-1; Zfh1; ZFh1; ZFH1; Zfh1a; zfl-1; zhf1
NM_170522.4 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster Zn finger homeodomain 1 (zfh1), transcript variant A, mRNA. (3560 bp)
CG1322-RA; CG1322-PA; zfh1-PA; zinc finger homeodomain protein-1; zinc-finger homeodomain1; Zinc-finger homeodomain protein 1; zinc-finger homeobox gene; zinc finger homeodomain-1; Zn homeodomain 1; zinc finger homeodomain 1" /codon_start=1 /product="Zn finger homeodomain 1, isoform A" /protein_id="...zfh1" /locus_tag="Dmel_CG1322" /gene_synonym="CG1322; Dmel\CG1322; l(3)00865; zfh-1; Zfh-1; ZFH-1; Zfh1; ZFh1; ZFH1; Zfh1a; zfl-1; zhf1" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature <1714..2112 /gene="zfh1" /locus_tag="Dmel_CG1322" /gene_synonym="CG1322;...
Synonym: CG1322; Dmel\CG1322; l(3)00865; zfh-1; Zfh-1; ZFH-1; Zfh1; ZFh1; ZFH1; Zfh1a; zfl-1; zhf1
NM_170523.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster unc-4, transcript variant D (unc-4), mRNA. (2870 bp)
misc_feature 1098..>1229 /gene="unc-4" /locus_tag="Dmel_CG6269" /gene_synonym="CG6269; Dmel\CG6269; DPHD-1; Dunc-4; Unc-4; Unc4" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" ORIGIN // REFERENCE 1 (bases 1 to 2870) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and Gelbart,W.M. CONSRTM FlyBase Consortium TITLE Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data JOURNAL G3 (Bethesda) 5 (8), 1721-1736 (2015) PUBMED 26109357 REMARK...
Synonym: CG6269; Dmel\CG6269; DPHD-1; Dunc-4; Unc-4; Unc4
NM_001298461.1 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster uncharacterized protein (CG15696), mRNA. (681 bp)
translation="MSDFSIEYILNRAGDRYVGTNASLGVLQRLRASLPFHPYAHPASYVSKESGGSPPASAAEAQIPVYDWLQYTRYHPPKLPRALRQNAPAKRTPGRLPRIPFTPQQLQALENAYKESNYLSAEDANKLADSLELTNTRVKIWFQNRRARERREKREKDESCDSTFSSNASSPEPEMIVVT" misc_feature 332..475 /gene="CG15696" /locus_tag="Dmel_CG15696" /gene_synonym="Dmel\CG15696" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(332..334,341..343,461..463,470..475) /gene="CG15696" /locus_tag="Dmel_CG15696" /gene_synonym="Dmel\CG15696" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" ORIGIN // REFERENCE...
Synonym: Dmel\CG15696
NM_142664.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster uncharacterized protein, transcript variant A (CG11294), mRNA. (1068 bp)
misc_feature 242..397 /gene="CG11294" /locus_tag="Dmel_CG11294" /gene_synonym="CT31519; Dmel\CG11294" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(245..247,365..367,374..379,386..388) /gene="CG11294" /locus_tag="Dmel_CG11294" /gene_synonym="CT31519; Dmel\CG11294" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" ORIGIN // REFERENCE 1 (bases 1 to 1068) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and...
Synonym: CT31519; Dmel\CG11294
NM_132272.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster uncharacterized protein, transcript variant B (CG11294), mRNA. (1291 bp)
misc_feature 242..397 /gene="CG11294" /locus_tag="Dmel_CG11294" /gene_synonym="CT31519; Dmel\CG11294" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(245..247,365..367,374..379,386..388) /gene="CG11294" /locus_tag="Dmel_CG11294" /gene_synonym="CT31519; Dmel\CG11294" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" ORIGIN // REFERENCE 1 (bases 1 to 1291) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V., Russo,S.M. and...
Synonym: CT31519; Dmel\CG11294
NM_001272423.2 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster uncharacterized protein (CG11085), mRNA. (1544 bp)
gene="CG11085" /locus_tag="Dmel_CG11085" /gene_synonym="Dmel\CG11085" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:238039" misc_feature 848..1009 /gene="CG11085" /locus_tag="Dmel_CG11085" /gene_synonym="Dmel\CG11085" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(848..850,857..859,977..979,986..991,998..1000) /gene="CG11085" /locus_tag="Dmel_CG11085" /gene_synonym="Dmel\CG11085" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" ORIGIN // REFERENCE 1 (bases 1 to 1544) AUTHORS Matthews,B.B., Dos...
Synonym: Dmel\CG11085
NM_132587.4 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster rough (ro), transcript variant B, mRNA. (1241 bp)
misc_feature 652..807 /gene="ro" /locus_tag="Dmel_CG6348" /gene_synonym="CG6348; Dmel\CG6348; DROROUGH; Ro" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(655..657,775..777,784..789,796..798) /gene="ro" /locus_tag="Dmel_CG6348" /gene_synonym="CG6348; Dmel\CG6348; DROROUGH; Ro" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" ORIGIN // REFERENCE 1 (bases 1 to 1241) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V.,...
Synonym: CG6348; Dmel\CG6348; DROROUGH; Ro
NM_170294.1 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase
Drosophila melanogaster rough (ro), transcript variant A, mRNA. (1169 bp)
misc_feature 625..780 /gene="ro" /locus_tag="Dmel_CG6348" /gene_synonym="CG6348; Dmel\CG6348; DROROUGH; Ro" /note="Homeobox domain; Region: Homeobox; pfam00046" /db_xref="CDD:425441" misc_feature order(628..630,748..750,757..762,769..771) /gene="ro" /locus_tag="Dmel_CG6348" /gene_synonym="CG6348; Dmel\CG6348; DROROUGH; Ro" /note="specific DNA base contacts [nucleotide binding]; other site" /db_xref="CDD:238039" ORIGIN // REFERENCE 1 (bases 1 to 1169) AUTHORS Matthews,B.B., Dos Santos,G., Crosby,M.A., Emmert,D.B., St Pierre,S.E., Gramates,L.S., Zhou,P., Schroeder,A.J., Falls,K., Strelets,V.,...
Synonym: CG6348; Dmel\CG6348; DROROUGH; Ro
NM_079797.3 - Drosophila melanogaster (fruit fly) - NCBI - UCSC - FlyBase

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : http://ggrna.dbcls.jp/dm/homeobox
lang : en | div : | spe : dm | query_string : homeobox | format : html | download : 

0.000 | 0.000 | search_start;
0.082 | 0.082 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:homeobox)%7C(nt:homeobox)%7C(aa:homeobox))?source=Drosophila melanogaster (fruit fly)?to=0&format=json
0.214 | 0.132 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((full_search:*:homeobox)%7C(nt:homeobox)%7C(aa:homeobox))?source=Drosophila melanogaster (fruit fly)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.220 | 0.006 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]