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2026-04-24 22:31:14, GGRNA.v2 : RefSeq release 233 (Jan, 2026)

LOCUS       XM_026835376             881 bp    mRNA    linear   INV 21-JAN-2026
DEFINITION  PREDICTED: Ciona intestinalis uncharacterized LOC100177459
            (LOC100177459), mRNA.
ACCESSION   XM_026835376
VERSION     XM_026835376.2
DBLINK      BioProject: PRJNA1397229
KEYWORDS    RefSeq.
SOURCE      Ciona intestinalis (vase tunicate)
  ORGANISM  Ciona intestinalis
            Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia;
            Cionidae; Ciona.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_136100) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2026 this sequence version replaced XM_026835376.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_018327825.1-RS_2026_01
            Annotation Pipeline         :: NCBI Eukaryotic Genome Annotation
                                           Pipeline (EGAP)
            Annotation Software Version :: 10.5
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 01/16/2026
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..881
                     /organism="Ciona intestinalis"
                     /mol_type="mRNA"
                     /db_xref="taxon:7719"
                     /chromosome="8"
                     /geo_loc_name="France:Roscoff"
                     /collection_date="2018-11-26"
     gene            1..881
                     /gene="LOC100177459"
                     /note="uncharacterized LOC100177459; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 108
                     long SRA reads, 6 Proteins, and 90% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:100177459"
     CDS             381..743
                     /gene="LOC100177459"
                     /codon_start=1
                     /product="uncharacterized protein LOC100177459"
                     /protein_id="XP_026691177.2"
                     /db_xref="GeneID:100177459"
                     /translation="
MSMNMSLRFEVANRGGSLINSLKVEKERIMKDELMAERILQVTTEEDVNLKAGWSEGLEEASQAQRYRLNKEEIKHELSYANKAVVAVRRAALRELLEREHDMYEQELHKIGKAFYIKRT"
     polyA_site      881
                     /gene="LOC100177459"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
gatcgcagacgcggcagataaattgaaaaatatgaagattgttttcgtggctttgttttcaatatttagaaattcaacgctttgataatgattttaaacgttcagggttttagtttttcataattattgtttgcgtacaaaacattctgctttagaaattcaacgctttacccgtaatattttgtttaaaaagtgggttataaaactgaatttcataacacttaatatacaccttgtacctttatcggtagcgtttttaagataatagtgttagtattttactgttgaattttatgattcgttttgtttcacagcattcttataaaaacaaagaagtttatattaaaattacagttatttgggagatctgaaatttcaagatgagtatgaacatgtctctccgatttgaggtggcaaacaggggtggaagcttgataaattcactgaaagtggagaaagaaagaattatgaaagatgagttaatggctgaaagaatcttgcaagtaacgactgaagaggatgtgaacctaaaagctggttggtcagaaggccttgaagaggccagccaagcgcaaagatacagactgaataaagaagaaattaagcatgaactgtcatatgccaacaaagctgttgttgctgtaaggagagctgctcttagagaacttcttgaaagagagcatgacatgtatgagcaggagctgcataaaattggaaaagcattctacatcaaacgcacttaaaatattttgtatgttgcacaataaaatgttttgattaatataaattcgccatatattattttatcatttgcttttgcaattacacgtagaagtttatatttttacgaaatatttttaattttttgcaaaatttttaga
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]