LOCUS       NM_001032649            1760 bp    mRNA    linear   INV 04-MAY-2019
DEFINITION  Ciona intestinalis Distal-less (dll-c), mRNA.
ACCESSION   NM_001032649
VERSION     NM_001032649.1
KEYWORDS    RefSeq.
SOURCE      Ciona intestinalis (vase tunicate)
  ORGANISM  Ciona intestinalis
            Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia;
            Cionidae; Ciona.
REFERENCE   1  (bases 1 to 1760)
  AUTHORS   Satou Y, Kawashima T, Shoguchi E, Nakayama A and Satoh N.
  TITLE     An integrated database of the ascidian, Ciona intestinalis: towards
            functional genomics
  JOURNAL   Zool. Sci. 22 (8), 837-843 (2005)
   PUBMED   16141696
REFERENCE   2  (bases 1 to 1760)
  AUTHORS   Imai KS, Hino K, Yagi K, Satoh N and Satou Y.
  TITLE     Gene expression profiles of transcription factors and signaling
            molecules in the ascidian embryo: towards a comprehensive
            understanding of gene networks
  JOURNAL   Development 131 (16), 4047-4058 (2004)
   PUBMED   15269171
REFERENCE   3  (bases 1 to 1760)
  AUTHORS   Satou Y and Satoh N.
  TITLE     Genomewide surveys of developmentally relevant genes in Ciona
            intestinalis
  JOURNAL   Dev. Genes Evol. 213 (5-6), 211-212 (2003)
   PUBMED   12736827
REFERENCE   4  (bases 1 to 1760)
  AUTHORS   Satou Y, Yamada L, Mochizuki Y, Takatori N, Kawashima T, Sasaki A,
            Hamaguchi M, Awazu S, Yagi K, Sasakura Y, Nakayama A, Ishikawa H,
            Inaba K and Satoh N.
  TITLE     A cDNA resource from the basal chordate Ciona intestinalis
  JOURNAL   Genesis 33 (4), 153-154 (2002)
   PUBMED   12203911
REFERENCE   5  (bases 1 to 1760)
  AUTHORS   Caracciolo A, Di Gregorio A, Aniello F, Di Lauro R and Branno M.
  TITLE     Identification and developmental expression of three Distal-less
            homeobox containing genes in the ascidian Ciona intestinalis
  JOURNAL   Mech. Dev. 99 (1-2), 173-176 (2000)
   PUBMED   11091088
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AJ278698.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AJ278698.1 [ECO:0000332]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1760
                     /organism="Ciona intestinalis"
                     /mol_type="mRNA"
                     /db_xref="taxon:7719"
                     /chromosome="7"
                     /map="7"
     gene            1..1760
                     /gene="dll-c"
                     /note="Distal-less"
                     /db_xref="GeneID:494411"
     exon            1..156
                     /gene="dll-c"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    24..26
                     /gene="dll-c"
                     /note="upstream in-frame stop codon"
     CDS             48..914
                     /gene="dll-c"
                     /codon_start=1
                     /product="distal-less"
                     /protein_id="NP_001027821.1"
                     /db_xref="GeneID:494411"
                     /translation="

MASHQQLMLQLDTHLTGGLMNQYQNCQGIGESVLHQDTNHVLGSDVMLGKGKKKKMRKPRTIYSSLQLQALNRRFQQTQYLALPERAELAATLGLTQTQVKIWFQNRRSKCKKLMKQGIHDKDNPLMSPGSNSSNNNNAGSPGSITSPMMTSMAPNAPPSELGTPGSTANSQEGIIGGIPQPTSWTPPSVEEQTSPIPQNSMSPNHNMTSPHPSGGVNTSPYTMMTSHHGMTSQHHQAMKTEMSSPVPTNGSPSIMTSYPINNGALVHGPITDPRFPGTPPGHPCTTK"

     misc_feature    216..386
                     /gene="dll-c"
                     /note="Region: Homeodomain; pfam00046"
                     /db_xref="CDD:459649"
     misc_feature    <474..890
                     /gene="dll-c"
                     /note="Herpes virus major outer envelope glycoprotein
                     (BLLF1); Region: Herpes_BLLF1; pfam05109"
                     /db_xref="CDD:282904"
     exon            157..344
                     /gene="dll-c"
                     /inference="alignment:Splign:2.1.0"
     exon            345..1261
                     /gene="dll-c"
                     /inference="alignment:Splign:2.1.0"
     exon            1262..1741
                     /gene="dll-c"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

gggatactcgagtgctcctcctctaggatcggggtctggaggatttcatggcttctcaccagcagcttatgctccaactggacactcatcttaccggaggactgatgaaccaataccagaactgccaaggaataggagaatctgttctccatcaagatacaaatcacgtgctgggaagtgacgtcatgctgggaaaaggcaagaaaaagaaaatgcgaaaaccgagaacgatttactcgagtctccaactgcaggcactgaacagaagattccaacaaacacaatatctcgctttgcctgaaagagcggaattagcagctacgttgggactcacgcagactcaggttaaaatttggttccaaaaccgtcgttcaaaatgcaagaagttgatgaaacaagggatccacgacaaagataatcctcttatgtcgcccggaagcaacagcagcaacaacaacaatgctggctcccctggatcgattacgtcaccaatgatgacgtcaatggccccgaacgcgcccccgtccgagctgggcacgccaggaagcacagcgaacagccaggaaggtatcataggcggtataccccagccgacttcttggaccccgccatcggttgaagaacaaacatcgccaattcctcagaactccatgtccccaaaccacaatatgacgtccccgcaccccagcggcggtgtgaacacgtcaccttacacgatgatgacgtcacatcacggcatgacgtcacagcaccaccaggcgatgaaaacggaaatgtcgtcaccggtaccgacaaacggaagtccgagcatcatgacgtcatatccgataaacaacggggcgttggtacacggacccattactgacccacggttcccgggtacgccgccgggccacccatgcaccaccaagtgaacccggccatgcagccccaccatatgatgtctgcttcgttctggtactctggcgccgagggagacccatctcagcaaaacttacagcatatggagaaccgagggattcgggactcgggttacttaaaataatgaaacgcttccatgatattttactcgtaacgacgcagcgatttctcgcttaacgacagaaactcgaaggtgaaacaccggccaaggacccgttgagattccgaaactgttcccacagccgcagacctttagaacgtgccttacacatatcattatattcacattgagttttctgttttaaaatcaaacgctcaattgctataactcagcacgtagatgttattcacggcagcacaaagatttgcacaaaacacaaacttttgatttttattggcattgacatttcgtgtgtacatatcgttcgcctcgacctgtttgaggcacaaccagtatttattggccaatgcgcgtgttcaagagcaagagatttactttttcgggggcctggcgccatagccggtctgggtatcgtttctttttgcgtcgctaatttgcatcgtttttgggctactttatgtattttctgtgctggtcgaaaaacgtgcacattacacaatttgtttaccaacacgcacgtccacttttgcattctatttcactatgattctgctattccattttaaagcgtgctggaccgatatattagtaaatataaaacacaattgttgttaaactaaagcatcatcagtacgtttatgtacggtctgtatatcatattttcggcaattgttttaataaacattcagcacacttttaaaaaaaaaaaaaaaaaaaa

//