LOCUS       NM_001032648            1588 bp    mRNA    linear   INV 26-JAN-2026
DEFINITION  Ciona intestinalis distal-less A (dll-a), mRNA.
ACCESSION   NM_001032648
VERSION     NM_001032648.1
KEYWORDS    RefSeq.
SOURCE      Ciona intestinalis (vase tunicate)
  ORGANISM  Ciona intestinalis
            Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia;
            Cionidae; Ciona.
REFERENCE   1  (bases 1 to 1588)
  AUTHORS   Irvine SQ, Cangiano MC, Millette BJ and Gutter ES.
  TITLE     Non-overlapping expression patterns of the clustered Dll-A/B genes
            in the ascidian Ciona intestinalis
  JOURNAL   J. Exp. Zool. B Mol. Dev. Evol. 308 (4), 428-441 (2007)
   PUBMED   17559091
  REMARK    GeneRIF: Contrary to the expectation for clustered gene duplicates,
            expression of Dll-A and Dll-B transcripts do not overlap temporally
            and only partially overlap spatially.
REFERENCE   2  (bases 1 to 1588)
  AUTHORS   Imai KS, Hino K, Yagi K, Satoh N and Satou Y.
  TITLE     Gene expression profiles of transcription factors and signaling
            molecules in the ascidian embryo: towards a comprehensive
            understanding of gene networks
  JOURNAL   Development 131 (16), 4047-4058 (2004)
   PUBMED   15269171
REFERENCE   3  (bases 1 to 1588)
  AUTHORS   Satou Y and Satoh N.
  TITLE     Genomewide surveys of developmentally relevant genes in Ciona
            intestinalis
  JOURNAL   Dev. Genes Evol. 213 (5-6), 211-212 (2003)
   PUBMED   12736827
REFERENCE   4  (bases 1 to 1588)
  AUTHORS   Caracciolo A, Di Gregorio A, Aniello F, Di Lauro R and Branno M.
  TITLE     Identification and developmental expression of three Distal-less
            homeobox containing genes in the ascidian Ciona intestinalis
  JOURNAL   Mech. Dev. 99 (1-2), 173-176 (2000)
   PUBMED   11091088
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AJ278696.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AJ278696.1, AB210371.1 [ECO:0000332]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1588
                     /organism="Ciona intestinalis"
                     /mol_type="mRNA"
                     /db_xref="taxon:7719"
                     /chromosome="7"
                     /map="7"
     gene            1..1588
                     /gene="dll-a"
                     /gene_synonym="Ci-Dll-A; Dll"
                     /note="distal-less A"
                     /db_xref="GeneID:494410"
     misc_feature    17..19
                     /gene="dll-a"
                     /gene_synonym="Ci-Dll-A; Dll"
                     /note="upstream in-frame stop codon"
     CDS             41..1402
                     /gene="dll-a"
                     /gene_synonym="Ci-Dll-A; Dll"
                     /codon_start=1
                     /product="distal-less"
                     /protein_id="NP_001027820.1"
                     /db_xref="GeneID:494410"
                     /translation="

MATVTETVNQQIPNPIDDTSGASSNSTTSPGNDVRPWVHDVKREPPETNCYQEHATSSNIPEQPYHHGLFPMNSFNAQYNNNNQKPAVTPENGRGYSYNHYSYPGTTLPNHHVPQDTSPSFLERKRIHEPGFEAGHFVSKATNNFSHRTPYFHETPNYKLNHHQPPMRGVSSPRSVDSQEQVFQNNPSVPGISEAEEKFNQSLSGNSFYGDHDENARDSDTDTPSVQNGDGGRVKGKKTRKPRTIYTSYQLQQLVRRFQRTQYLALPERAELAASLGVTQTQIKIWFQNRRSNYKKLLKQQLLHKHHGAADIMSMGFGFGGQQIDEQSGPYMTSPYSEQYTPESQGWDNEMTRSRNDPYHQRHEPLGDQNQYPVNIKESGELPDCRMAVPQLHWEAQYPMNPNHASSYSNIPATPHMGIPLNGRNLPGVVDSHHTDPGTAGMRRDGILQWGSP"

     misc_feature    758..928
                     /gene="dll-a"
                     /gene_synonym="Ci-Dll-A; Dll"
                     /note="Region: Homeodomain; pfam00046"
                     /db_xref="CDD:459649"
ORIGIN      

ggcacgagaaacaacttagttatatattaagacccttaaaatggcaactgtaaccgagacggtgaaccagcagatcccgaatccaattgacgacacttcaggcgcgtcatcaaactcaactacgtcaccaggcaatgacgtgagaccgtgggtgcatgacgtcaaacgggaacccccagaaactaattgctaccaagagcacgccacaagtagtaatataccagaacagccatatcatcacggactctttcctatgaacagtttcaacgctcagtacaataacaacaaccaaaaacccgccgtaacaccggaaaatggccgaggttattcatacaaccattatagctacccgggcactaccttgccaaatcatcatgtaccacaagatacatcgccctcgtttttggaaaggaaaagaatacacgaaccggggttcgaagctgggcacttcgtgtccaaagcaacaaacaatttctcgcaccgaacgccttattttcacgaaaccccgaattacaagctaaaccatcaccagccacccatgcgaggagtttcaagtcctcggagtgtggactcccaggagcaggtgtttcaaaataatccaagtgtgccaggaatttcggaagcggaggaaaagtttaatcaatcattgagtggaaacagtttctatggcgaccatgacgaaaacgccagagactccgacacggatactccgtcggtacaaaatggcgacggcggacgagtgaagggcaaaaagactaggaaaccacgcacaatatacacgagctaccaactccagcagctcgttcgaaggtttcaaagaactcagtatcttgctctaccagaaagagcagaactagctgcttcacttggagtaactcaaacccagatcaaaatctggtttcaaaaccgacgttcgaactataagaagcttttaaagcagcaacttttacataagcatcatggtgcggctgatatcatgtcaatgggctttgggttcggcggacagcagatcgacgagcaatcaggaccatacatgacgtcgccttactcggaacaatatacacccgagagccaggggtgggataatgaaatgacaagaagtaggaatgacccttatcatcagcgtcacgaaccgttgggggatcaaaaccaatacccggtaaatattaaggagtctggagagttacctgactgccgtatggcggtcccacagctgcattgggaagcccagtacccaatgaatcctaaccacgcgagttcttactcgaacatacctgctacaccacacatggggatcccacttaacgggagaaacctaccaggtgtagtggattcgcaccatactgacccgggcacagcgggcatgcgaagagacggtattttgcaatggggcagtccatagataacgtgttgccgttcttttgtatgaaaaaacttctcagtcaaatgtacgaatatgttgaatgttattgttactatttcaaatattggaattttccttcatatgcgcacgtgaagttgcggattgatacatcgtgatgacgtaatacaactaaaccacgaacctgaaaaaaaaaaaaaaaaaaaa

//