LOCUS       NM_001032509            1884 bp    mRNA    linear   INV 04-MAY-2019
DEFINITION  Ciona intestinalis intermediate filament protein IF-A (if-a), mRNA.
ACCESSION   NM_001032509
VERSION     NM_001032509.1
KEYWORDS    RefSeq.
SOURCE      Ciona intestinalis (vase tunicate)
  ORGANISM  Ciona intestinalis
            Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Phlebobranchia;
            Cionidae; Ciona.
REFERENCE   1  (bases 1 to 1884)
  AUTHORS   Wang J, Karabinos A, Zimek A, Meyer M, Riemer D, Hudson C, Lemaire
            P and Weber K.
  TITLE     Cytoplasmic intermediate filament protein expression in tunicate
            development: a specific marker for the test cells
  JOURNAL   Eur. J. Cell Biol. 81 (5), 302-311 (2002)
   PUBMED   12067066
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AJ298329.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AJ298329.1 [ECO:0000332]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1884
                     /organism="Ciona intestinalis"
                     /mol_type="mRNA"
                     /db_xref="taxon:7719"
     gene            1..1884
                     /gene="if-a"
                     /gene_synonym="Vim"
                     /note="intermediate filament protein IF-A"
                     /db_xref="GeneID:445691"
     misc_feature    8..10
                     /gene="if-a"
                     /gene_synonym="Vim"
                     /note="upstream in-frame stop codon"
     CDS             26..1588
                     /gene="if-a"
                     /gene_synonym="Vim"
                     /codon_start=1
                     /product="intermediate filament protein IF-A"
                     /protein_id="NP_001027681.1"
                     /db_xref="GeneID:445691"
                     /translation="

MAQRSSRKTTEERSSSYKRHFGEGPARFTYSSKSSPGRSQSATRSYRYSSSGGGGGGGAAMAGGAMGGGMGMGAGMGMGAGMGGERIRMTRAAPVSSGISMRDINLMSDALGPDFERMRINEKEELQVLNTRFAGYIQKVRALEQANKILEVQLEQLSAQQPGRVADMFEDELARLRREVDQITKEKANILMQLENAALEANNWKDKYEEEAISKRELEDDLNSMRKDCDDATLVRLDLERRLETLQEEIEFLKRTHDQEVSELMEQVRKTEIKIEMAPGPDLEELVEDMRKQYEKLASKNRADAEEWYTEKVSGLQDQAVKNDDLVRNVRSELSEYRKSVQTLNMEIDSLRGTNDSLQRAMGELEERYNRDTSDYQDTIMNLQAECDDLKTQMAQHLRQYQELMDVKMALDIEIATYRKLLEGEESRLAERLRTSGGGSSRFVTTTSRSAGGYSSSAGGYSSGRGGASDVMGSDDVETVTTKKVVVKTIETKDGKVVSQTEDVREQSSGDHDDNAHATL"

     misc_feature    386..1309
                     /gene="if-a"
                     /gene_synonym="Vim"
                     /note="Intermediate filament protein; Region: Filament;
                     pfam00038"
                     /db_xref="CDD:425436"
ORIGIN      

gaagttataacaaggtaacctcaagatggcgcaaaggagcagcagaaaaacgaccgaagagcgtagctcaagctacaaacgtcacttcggtgaaggtccggccagattcacttattcaagcaagtcatctccaggccgatcccagtccgcaacgcgatcgtacaggtactcaagcagcggcggtggcggcggcggtggagctgccatggccggtggtgccatgggtggcggtatgggcatgggtgctggcatgggtatgggtgctggtatggggggcgaaaggattaggatgacccgagccgcaccagtgagcagcgggatctcaatgcgagacatcaacctaatgtcggatgctttgggaccggatttcgaaagaatgaggattaatgaaaaggaagaacttcaagtcctcaatacaagattcgctggctacatccaaaaggttcgagcacttgaacaagccaataagatcttggaagttcaacttgaacaactgagcgcccaacaacctggacgtgttgctgatatgttcgaagatgaattggcaagactccgccgagaagtcgaccagatcaccaaagaaaaggcgaacatcctgatgcagttggaaaacgcagcgttggaagcaaacaactggaaagacaaatacgaagaagaagcaatcagcaaacgggaactcgaagacgacctcaactccatgcgaaaagattgcgatgacgcaactttggttcgtcttgaccttgaacgaagattggaaacacttcaagaagaaattgaattccttaagagaactcatgaccaggaggtttctgagctcatggaacaagtcaggaagacggagataaagatcgagatggctcccggacctgatctggaggaacttgttgaagacatgaggaaacaatacgagaaactcgcatccaagaaccgagctgatgctgaggaatggtacactgaaaaggtgtccggtctccaagaccaagccgtcaagaacgacgatctcgtacgtaacgttcgaagtgagttgagcgaatacagaaagagtgtccaaaccttgaatatggagattgactctttgagaggaacaaacgactcccttcaacgagcaatgggtgaacttgaagagagatacaacagagatacctccgattaccaagataccatcatgaacttgcaggctgagtgcgacgacctgaagacacagatggctcaacacctccgtcaataccaagaactcatggacgtaaagatggctttggacatcgagatcgctacttacaggaagctgttggagggagaggaatcaaggcttgctgaacgcctccgaacctcgggcggcggtagctcccgtttcgtcacaaccacatctagatcagcagggggatattcatcatcagctggcgggtattcatccggccgagggggcgctagtgacgtcatgggaagtgatgacgtagaaaccgtcacaacaaagaaggttgttgtcaagacaattgaaacaaaggacggaaaggtcgtgagccaaaccgaggacgttcgtgagcaatcatctggtgatcatgatgacaacgctcacgccaccttgtgagcaacaatggctattatttaaaaacaatttataaatgttacgtaatcaattcaaagaaaaaagtttataatctccagttattacgtaataaagccgtttgtttggatttcgcgtgtaccaagtatgacgtaatcgctttgtttgtgacgttgctatgacgtgtgatctaacagatctgtattgttgacaaaggttgctgctgtgacgtaatgtgtgacgtcaaatacatggaagcttggtttatgagaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa

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