LOCUS       NM_068104                777 bp    mRNA    linear   INV 22-NOV-2023
DEFINITION  Caenorhabditis elegans RRM domain-containing protein (rnp-3), mRNA.
ACCESSION   NM_068104
VERSION     NM_068104.6
DBLINK      BioProject: PRJNA158
KEYWORDS    RefSeq.
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 777)
  AUTHORS   Sulson,J.E. and Waterston,R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282 (5396), 2012-2018 (1998)
   PUBMED   9851916
  REMARK    Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE   2  (bases 1 to 777)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 777)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
            Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE   4  (bases 1 to 777)
  AUTHORS   Sulson,J.E. and Waterston,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
            Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
            at Washington University, St. Louis, MO 63110, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by WormBase. This
            record is derived from an annotated genomic sequence (NC_003282).
            
            On Sep 4, 2019 this sequence version replaced NM_068104.5.
FEATURES             Location/Qualifiers
     source          1..777
                     /organism="Caenorhabditis elegans"
                     /mol_type="mRNA"
                     /strain="Bristol N2"
                     /db_xref="taxon:6239"
                     /chromosome="IV"
     gene            1..777
                     /gene="rnp-3"
                     /locus_tag="CELE_K08D10.3"
                     /db_xref="GeneID:177182"
                     /db_xref="WormBase:WBGene00004386"
     CDS             7..660
                     /gene="rnp-3"
                     /locus_tag="CELE_K08D10.3"
                     /standard_name="K08D10.3a"
                     /note="Confirmed by transcript evidence"
                     /codon_start=1
                     /product="RRM domain-containing protein"
                     /protein_id="NP_500505.1"
                     /db_xref="EnsemblGenomes-Gn:WBGene00004386"
                     /db_xref="EnsemblGenomes-Tr:K08D10.3a"
                     /db_xref="GeneID:177182"
                     /db_xref="GOA:Q21323"
                     /db_xref="InterPro:IPR000504"
                     /db_xref="InterPro:IPR012677"
                     /db_xref="InterPro:IPR035979"
                     /db_xref="UniProtKB/TrEMBL:Q21323"
                     /db_xref="WormBase:WBGene00004386"
                     /translation="

MADINPNHTIYVNNLNEKVKKDELKRSLHMVFTQFGEIIQLMSFRKEKMRGQAHIVFKEVSSASNALRALQGFPFYGKPMRIQYAREDSDVISRAKGTFVEKRQKSTKIAKKPYEKPAKNGKSAAEPTQKEPQETDGPGLPNNILFCSNIPEGTEPEQIQTIFSQFPGLREVRWMPNTKDFAFIEYESEDLSEPARQALDNFRITPTQQITVKFASK"

     misc_feature    31..264
                     /gene="rnp-3"
                     /locus_tag="CELE_K08D10.3"
                     /note="RNA recognition motif 1 (RRM1) found in the
                     U1A/U2B'/SNF protein family; Region: RRM1_U1A_like;
                     cd12246"
                     /db_xref="CDD:409692"
     misc_feature    order(37..39,43..48,55..57,130..132,136..138,142..150,
                     154..162,166..168,238..240,247..249,253..264)
                     /gene="rnp-3"
                     /locus_tag="CELE_K08D10.3"
                     /note="RNA binding site [nucleotide binding]; other site"
                     /db_xref="CDD:409692"
     misc_feature    427..642
                     /gene="rnp-3"
                     /locus_tag="CELE_K08D10.3"
                     /note="RNA recognition motif 2 (RRM2) found in the
                     U1A/U2B'/SNF protein family; Region: RRM2_U1A_like;
                     cd12247"
                     /db_xref="CDD:409693"
ORIGIN      

gttaaaatggccgacatcaacccgaatcacacgatctatgtgaacaatctcaatgagaaagtcaagaaagatgaactcaaacgctctcttcacatggttttcacacaattcggtgaaataattcagctaatgtcatttcgaaaggaaaaaatgcgcggacaagcacatatcgtcttcaaagaggtctcatcagcgtcaaatgctcttcgagccctgcaaggattcccattttatggaaaaccaatgagaattcaatatgcaagagaggattctgatgtgatttctcgtgccaaaggaacttttgtcgaaaaacgacaaaaatccacgaaaatcgccaaaaaaccatatgaaaaaccggcgaaaaatggaaaatcggcagcggagccgactcaaaaggagccgcaggagactgacggaccaggattgccgaataatattcttttctgctcgaatattccagaaggaaccgagccagaacagattcagaccattttcagccaattcccaggacttcgtgaggttcgctggatgccaaacaccaaggattttgcatttatcgaatacgaatccgaagatctttcagagccagcacgtcaagctctcgacaatttcagaattactccaactcagcagattactgtcaaatttgccagcaaataggcacggaaattggccccgaaaatcgcctaatttattgattttttttcgcatctgaatctcattttctcatgttttatgtgtgtttttcccgattttctatgaattttggtaattttc

//