LOCUS       NM_065592               1417 bp    mRNA    linear   INV 22-NOV-2023
DEFINITION  Caenorhabditis elegans ADP-ribosylation factor-like protein 6
            (arl-6), mRNA.
ACCESSION   NM_065592
VERSION     NM_065592.3
DBLINK      BioProject: PRJNA158
KEYWORDS    RefSeq.
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 1417)
  AUTHORS   Sulson,J.E. and Waterston,R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282 (5396), 2012-2018 (1998)
   PUBMED   9851916
  REMARK    Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE   2  (bases 1 to 1417)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1417)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
            Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE   4  (bases 1 to 1417)
  AUTHORS   Sulson,J.E. and Waterston,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
            Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
            at Washington University, St. Louis, MO 63110, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by WormBase. This
            record is derived from an annotated genomic sequence (NC_003281).
            
            On May 27, 2020 this sequence version replaced NM_065592.2.
FEATURES             Location/Qualifiers
     source          1..1417
                     /organism="Caenorhabditis elegans"
                     /mol_type="mRNA"
                     /strain="Bristol N2"
                     /db_xref="taxon:6239"
                     /chromosome="III"
     gene            1..1417
                     /gene="arl-6"
                     /locus_tag="CELE_C38D4.8"
                     /db_xref="GeneID:183311"
                     /db_xref="WormBase:WBGene00000193"
     CDS             17..589
                     /gene="arl-6"
                     /locus_tag="CELE_C38D4.8"
                     /standard_name="C38D4.8"
                     /note="Confirmed by transcript evidence"
                     /codon_start=1
                     /product="ADP-ribosylation factor-like protein 6"
                     /protein_id="NP_497993.1"
                     /db_xref="EnsemblGenomes-Gn:WBGene00000193"
                     /db_xref="EnsemblGenomes-Tr:C38D4.8"
                     /db_xref="GeneID:183311"
                     /db_xref="WormBase:WBGene00000193"
                     /translation="

MGFFSSLSSLFGLGKKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSFHAFDMAGQMKYRSTWESYFHSSQGVIFVLDSSDRLRMELLKDELMMVMEHKDVVSRGIPIVILANKMDIPGAMTASDITVALGLNLYRSGTWSIHSTCALTGDGLDKAMQQLSAEITKYMESRRT"

     misc_feature    71..556
                     /gene="arl-6"
                     /locus_tag="CELE_C38D4.8"
                     /note="Arf-like 6 (Arl6) GTPase; Region: Arl6; cd04157"
                     /db_xref="CDD:206722"
     misc_feature    86..109
                     /gene="arl-6"
                     /locus_tag="CELE_C38D4.8"
                     /note="G1 box; other site"
                     /db_xref="CDD:206722"
     misc_feature    order(92..112,161..166,230..232,404..409,413..415,
                     503..511)
                     /gene="arl-6"
                     /locus_tag="CELE_C38D4.8"
                     /note="GTP/Mg2+ binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:206722"
     misc_feature    order(92..97,107..109,119..121,161..184,248..250,263..265)
                     /gene="arl-6"
                     /locus_tag="CELE_C38D4.8"
                     /note="putative GAP interaction site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:206722"
     misc_feature    order(122..136,143..175)
                     /gene="arl-6"
                     /locus_tag="CELE_C38D4.8"
                     /note="Switch I region; other site"
                     /db_xref="CDD:206722"
     misc_feature    order(164..178,191..193,221..223,233..235,251..253,
                     257..265)
                     /gene="arl-6"
                     /locus_tag="CELE_C38D4.8"
                     /note="putative GEF interaction site [polypeptide
                     binding]; other site"
                     /db_xref="CDD:206722"
     misc_feature    164..166
                     /gene="arl-6"
                     /locus_tag="CELE_C38D4.8"
                     /note="G2 box; other site"
                     /db_xref="CDD:206722"
     misc_feature    order(167..190,218..220,251..253,260..265)
                     /gene="arl-6"
                     /locus_tag="CELE_C38D4.8"
                     /note="putative effector interaction site [active]"
                     /db_xref="CDD:206722"
     misc_feature    order(176..196,203..220)
                     /gene="arl-6"
                     /locus_tag="CELE_C38D4.8"
                     /note="interswitch region [active]"
                     /db_xref="CDD:206722"
     misc_feature    221..274
                     /gene="arl-6"
                     /locus_tag="CELE_C38D4.8"
                     /note="Switch II region; other site"
                     /db_xref="CDD:206722"
     misc_feature    221..232
                     /gene="arl-6"
                     /locus_tag="CELE_C38D4.8"
                     /note="G3 box; other site"
                     /db_xref="CDD:206722"
     misc_feature    404..415
                     /gene="arl-6"
                     /locus_tag="CELE_C38D4.8"
                     /note="G4 box; other site"
                     /db_xref="CDD:206722"
     misc_feature    503..511
                     /gene="arl-6"
                     /locus_tag="CELE_C38D4.8"
                     /note="G5 box; other site"
                     /db_xref="CDD:206722"
ORIGIN      

agatctaaaaagatcaatgggcttcttttcgtcattgtccagtttattcggattgggaaaaaaggatgtgaacatcgttgtagttggactggataactcgggaaagactacaattttgaatcaactcaaaactccagagacaagaagtcagcagattgtgccaactgttggacacgtggttacgaatttcagtactcaaaatctcagttttcatgcattcgatatggcaggacaaatgaaatatcgtagtacatgggaaagctactttcactcttctcagggtgtcatttttgtactcgatagctctgatcgtcttcgaatggagttgctcaaagacgagttgatgatggtgatggaacacaaggatgtggtttcccgagggattccaatagtcattcttgccaacaaaatggacatccctggagcgatgactgcttcggatattacggtagctctaggcctaaacctgtatcgtagtggtacctggtcgatacactcaacgtgtgcactcactggagatggattggacaaggctatgcaacaactttcagctgaaatcacaaaatatatggaatcaaggagaacttgagaaattaaactgttttttgtaaacaatgcatgtgatcttgtaaattcttgtagaaaacctaccaaattcgtatcaattggcaaagctgtgtatttaaaaaatataatttagatttggaaacacatatgttaactgaaagagtaggactagatatgattttgtctaaatactcttaaaatgtcccaaaaatccaaatatctaaacatgtttaagatttttcaacttttccagtcaactttggcaaattgccaatttttttaccaatttggactttatgaaaaacttcgggcaattttgtaaatttgaacaatcacagcgtttaaatacatataatttaaatataattaaaatacaaaactattagaaatcatattttccggatttccaaaattatgtgctttgaaaactgaggaattgccactttttgtggactttggagaaaaaaaaatgttttcaattgttaaagatattttaccatcaagatctgatttttctaaccccaattttataaattaaaacaaaaagaactgaaaaaaaatcataaatttctagtcaaaaattactcagttttcacttatcatcattttggacgttgatcataagttgtattgtattgtatttattacgatagagttgttcaacaaatttggtaatttgccaaaaaatttgacaaaatagtccgaaaagttgtttcaattagatacttggttttttgtaatatgttttagttttagtatatttggtatgaaactccttacaattggagatgatgttcttttttccaatgttccacattttcctaataatccgttttatctttccttgaat

//