LOCUS       NM_001383877             831 bp    mRNA    linear   INV 22-NOV-2023
DEFINITION  Caenorhabditis elegans ShKT domain-containing protein (C15F1.1),
            mRNA.
ACCESSION   NM_001383877
VERSION     NM_001383877.2
DBLINK      BioProject: PRJNA158
KEYWORDS    RefSeq.
SOURCE      Caenorhabditis elegans
  ORGANISM  Caenorhabditis elegans
            Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
            Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
            Caenorhabditis.
REFERENCE   1  (bases 1 to 831)
  AUTHORS   Sulson,J.E. and Waterston,R.
  CONSRTM   Caenorhabditis elegans Sequencing Consortium
  TITLE     Genome sequence of the nematode C. elegans: a platform for
            investigating biology
  JOURNAL   Science 282 (5396), 2012-2018 (1998)
   PUBMED   9851916
  REMARK    Erratum:[Science 1999 Jan 1;283(5398):35]
REFERENCE   2  (bases 1 to 831)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-NOV-2023) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 831)
  AUTHORS   WormBase.
  CONSRTM   WormBase Consortium
  TITLE     Direct Submission
  JOURNAL   Submitted (29-OCT-2023) WormBase Group, European Bioinformatics
            Institute, Cambridge, CB10 1SA, UK. Email: help@wormbase.org
REFERENCE   4  (bases 1 to 831)
  AUTHORS   Sulson,J.E. and Waterston,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-MAR-2003) Nematode Sequencing Project: Sanger
            Institute, Hinxton, Cambridge CB10 1SA, UK and The Genome Institute
            at Washington University, St. Louis, MO 63110, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by WormBase. This
            record is derived from an annotated genomic sequence (NC_003280).
            
            On Feb 2, 2021 this sequence version replaced NM_001383877.1.
FEATURES             Location/Qualifiers
     source          1..831
                     /organism="Caenorhabditis elegans"
                     /mol_type="mRNA"
                     /strain="Bristol N2"
                     /db_xref="taxon:6239"
                     /chromosome="II"
     gene            1..831
                     /gene="C15F1.1"
                     /locus_tag="CELE_C15F1.1"
                     /db_xref="GeneID:182638"
                     /db_xref="WormBase:WBGene00015794"
     CDS             14..727
                     /gene="C15F1.1"
                     /locus_tag="CELE_C15F1.1"
                     /standard_name="C15F1.1a"
                     /note="Confirmed by transcript evidence"
                     /codon_start=1
                     /product="ShKT domain-containing protein"
                     /protein_id="NP_001370980.1"
                     /db_xref="GeneID:182638"
                     /db_xref="InterPro:IPR003582"
                     /db_xref="InterPro:IPR012674"
                     /db_xref="InterPro:IPR014878"
                     /db_xref="UniProtKB/TrEMBL:A0A2C9C2Z4"
                     /db_xref="WormBase:WBGene00015794"
                     /translation="

MSIHQTSFLLFTLFSLLSFSIAADTCRDFDNNCRDWITVNPNACDSTEYIKRSCLKSCGQCGEVDPKYDLRRLSQELTPIGFLVGKWRSEHGGKAIFPTIPKFTFGEEIEISIPGDAMQSAQALNYTAFAWSINDKDELHSEYGYISVKPNTKEVALTTVMNNGFVTVEEGPVNGNQIRFRLKDIGRISFSRDLPVHDLVREWTLLDRSTLQARLNMETLTHGMQEHTFIRYNKIEP"

     misc_feature    89..196
                     /gene="C15F1.1"
                     /locus_tag="CELE_C15F1.1"
                     /note="ShK toxin domain; Region: ShKT; smart00254"
                     /db_xref="CDD:214586"
     misc_feature    242..718
                     /gene="C15F1.1"
                     /locus_tag="CELE_C15F1.1"
                     /note="heme-binding beta-barrel domain of human THAP4,
                     Arabidopsis thaliana nitrobindin, and similar proteins;
                     Region: lipocalin_heme-bd-THAP4-like; cd07828"
                     /db_xref="CDD:381185"
     misc_feature    order(260..262,272..274,308..310,320..322,326..328,
                     338..340,344..346,383..385,389..391,395..397,401..403,
                     428..433,437..439,443..445,449..451,494..496,506..508,
                     551..553,557..559,599..601,608..610,614..616,620..622,
                     644..646,650..652,656..658,662..664,668..670,692..697,
                     701..703,707..709)
                     /gene="C15F1.1"
                     /locus_tag="CELE_C15F1.1"
                     /note="ligand binding cavity [chemical binding]; other
                     site"
                     /db_xref="CDD:381185"
     misc_feature    order(308..310,320..322,326..328,395..397,401..403,
                     428..433,494..496,506..508,599..601,608..610,614..616,
                     656..658,662..664,668..670,692..697)
                     /gene="C15F1.1"
                     /locus_tag="CELE_C15F1.1"
                     /note="heme binding site [chemical binding]; other site"
                     /db_xref="CDD:381185"
ORIGIN      

acttttcagagaaatgtcaatacatcagacgtcatttctattgttcacacttttcagtttattatcattttcaatagcagccgacacatgccgggactttgataataattgtagagattggattactgtcaatccaaatgcatgtgattcaactgaatatattaaaagaagttgtctcaagagttgtggacaatgtggagaggttgatcccaaatacgatttacgtcgtctttctcaggaactcacaccaattggtttcctagtagggaaatggagatctgaacatggaggaaaagcaatcttcccaacaattccgaaattcacatttggagaagaaatcgaaatttcaattccaggcgatgcaatgcaatcggctcaagctcttaactacacagcatttgcctggtcgataaatgataaagatgagttgcacagtgaatatggatatatttctgtgaaaccaaacacaaaagaagtcgcactgacaactgtaatgaataatggttttgtgacagtcgaagaaggtccagtcaatggaaatcaaattagattccggcttaaggatatcggaagaattagtttcagcagagatttgcctgttcatgatctcgtccgagaatggactcttctggatcgatcaacacttcaagcccgtctgaacatggagacattaacacatggaatgcaggagcacacatttattcgttacaacaaaattgagccataaactgaagaaaaacgtgtttatctctttctattccacttctagtcaactacttcccactcaattgattccccctttccccttaaaaataaaaactcttgctgctt

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