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Previous release (v1)
2026-05-16 17:20:04, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XR_013521466 3491 bp RNA linear PRI 01-JAN-2026 DEFINITION PREDICTED: Callithrix jacchus NRDE-2, necessary for RNA interference, domain containing (NRDE2), transcript variant X4, misc_RNA. ACCESSION XR_013521466 VERSION XR_013521466.1 DBLINK BioProject: PRJNA1262967 KEYWORDS RefSeq. SOURCE Callithrix jacchus (white-tufted-ear marmoset) ORGANISM Callithrix jacchus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_133509) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_049354715.1-RS_2025_12 Annotation Pipeline :: NCBI Eukaryotic Genome Annotation Pipeline (EGAP) Annotation Software Version :: 10.5 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/15/2025 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3491 /organism="Callithrix jacchus" /mol_type="transcribed RNA" /isolate="240" /db_xref="taxon:9483" /chromosome="8" /sex="male" /tissue_type="fibroblast cell line" /geo_loc_name="USA: Pittsburgh" /collection_date="2023-08-31" gene 1..3491 /gene="NRDE2" /note="NRDE-2, necessary for RNA interference, domain containing; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 191 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns" /db_xref="GeneID:100389090" misc_RNA 1..3491 /gene="NRDE2" /product="NRDE-2, necessary for RNA interference, domain containing, transcript variant X4" /experiment="COORDINATES: cap analysis [ECO:0007248] and polyA evidence [ECO:0006239]" /db_xref="GeneID:100389090" ORIGIN
atttctgtagcgaggaacggcggtgcggcctgtggtcatggcgctgttcccggcctttgcgggcgttagcgaggcccccgatagtgggagctccaggaaagagttagactggctgagcaacccaagcttttgtgttggatccgtaacgtccctgagccaacaacctgaagcagccacagcccatgtttctgaagggtcaccgctgtcgaggagtcctctgaaatcagagccttcagatgaaagtgacactaacaaaaagctcaaacaaacaagcagaaaaaagaagaaagagaaaaagaaaagaaggaagcatcagcatcataagaaaacaaagaggaaacatggacagtcgagtagcagtaggtcggagacagacactgattctgaaaaggacagaccttccagagccatcggaggccgtaaaaaggaatctgagaaaccgaatcaaggaaataatgcggcagctgatactggacatcgctttgtttggcttgaggacattcaggctgtgacaggagaaaccttcagaacagataagaaaccagatcctgcgaactgggaatacaagtctctctaccgaggggatatagcaagatacaagaggaaaggagactcctgccttggcattaatcctgtgaagcaacgcatatcttgggaagggacttccacagagaagaagcattcacgcaagcaggttgaacgctattttactaagaagagtgtggggttaatgaacattgatggaattgccattagcagtaaaactgaacctccatcatctgaccccgcctcctttataccagtgaaggacttggaagatgcagctcctgttacaacctggttgaatcctctggggatttatgatcagtcaaccacacagtggctacaaggacagggtcctccagagcaggaatcaaagcagccagacacacagccagacagcgagagtgcagctctcaaggccagggtggaggagtttaacaggagggtgcgggagaatccgcgggatacgcagctgtggatggcatttgttgcttttcaggacgaggtcatgaaaagtcctgggctgtatgccatcgaggaaggagagcaggaaaagcgaaagcggtccctgaagctcattctggagaagaagctggccatcctggagcgggccattgagagcaaccagagcagtgtggatctgaaactggccaagctgaagctctgcacagagttctgggagccctccactctggtcaaagagtggcagaaactgatatttttacatcccaataatacagccctgtggcagaaataccttttgttttgccagagccagtttagtaccttttcgatatcaaaaattcacagtctttatggaaaatgcttgagtactttgtctgctgttaaggacggcagcatcttatctcaccctgcgttgcctggcacagaagaggccatgtttgggtggcaaccaggcttcttcccctctgccctcctgttcgcagcactctttcttcagcagtgccactttctgcggcaggccggccactctgagaaggccatctcattgttccaggccatggtggacttcaccttcttcaaacctgacagcctgaaagagatgcctaccaaaggacaggtggaattctttgagcccttttgggacagtggagagccccgggctggggaaaagggagcccgaggatggaaggcgtggatgcaccagcaggagcgaggtggctgggtggtcatcagcccagacgaggatgacgaagaaccagaagaggacgaccaggaaataaaagataagactctgcccaggtggcagatctggcttgctgctgagcgttcccgagaccagaggcactggcggccctggcgccctgataagaccaagaagcaaacggaggaagactgtgaggatcccgagagacaggtgctgtttgatgatatcgggcagtctttgatcagactctccagcgaagacctgcagttccagctggtggtggcctttctgcagttcttgggtgtgccttccggcttcactctgccagcctcctgtctttatctggccatggatgagcacagcatctttgataatggactttatgatgaaaagcccttgacttttttcaaccctttgttttccggggccagctgtgtgggccgcatggaccggctgggctgtcctcgctggaccaggggtcagaaccgagagggcgaggagttcatccgcaacgtcttccacctggtcatgcctttgttttcaggcaaagagaagtctcagctctgcttctcctggttacagtatgagattggaaaggtcgtgtggtgtctgcacactaaaaacaagaagagattaaagtcacaagggaagaactgcaaaaaactagccaagaatctccttaaggagccagaaaaccgcaacaacttttgcctctggaagcagtatgcccatctggagtggttgcttggcaacacagaggatgctagaaaagtttttgacacagcactgggcatggcaggaagccaaggactgaaggactctgaactctgtgagctcagtcttctctatgccaagctggaggtggagctggaggtggagctgtcgccggaagtgagaggggccgcctccgcccgagctgttcacatattaaccaagctgaccgagagcagcccctacgggccctacactggacaggtgttggctgttcacattttgaaagcacgaaaagcttacgagcacgcgctgcaggactatttgggtgacagctgtgtctccgatccagctcccaccgattcttgtacccgcctaattagcttgtccaaatgcttcatgctcttccagtatttgactgtcgggattggtgctgctgtacggatatacgaacaggttagacggtagagagatccacgccacaattcctgagaccggcttaacgcatcggatccaagccctgtttgaaaatgccatgcgcagcgacagtggcagccagtgccccttgctgtggaggatgtatttgaactttttggtttccttaggaaataaagaaagaagcaaaggtgtattctacaaagcacttcagaattgtccgtgggcaaaggtgttgtacctggatgccgtggagtacttccccgaggagatgcaggaggtcctggatctgatgaccgagaaggagctccgggtgcgcctgccactggaggagctggagctgctgctggaggattagagccgcggggaatagaccgtgcctatgaggccaagtcgcccacctggcagagccaggcggcatgagcggagaatgtgtgcgttagagacctcagcttttgaaatgttctttctcaatattaataatgtgtctgggctggcagcctctcacatctggcacacttttggggtgtgaaaatgacacaaaagctgtttacatattatatatgtgtatgtgtgtatatatgtacatagccagggagtcatgccaagtggtcattaaaccgatgatgattga
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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