2024-09-08 09:56:08, GGRNA.v2 : RefSeq release 225 (Jul, 2024)
LOCUS XR_009994669 2353 bp RNA linear INV 05-FEB-2024 DEFINITION PREDICTED: Saccostrea cucullata uncharacterized LOC134279535 (LOC134279535), ncRNA. ACCESSION XR_009994669 VERSION XR_009994669.1 DBLINK BioProject: PRJNA1071555 KEYWORDS RefSeq. SOURCE Saccostrea cucullata (small rock oyster) ORGANISM Saccostrea cucullata Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Saccostrea. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_026928995) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_032062105.1-RS_2024_01 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 01/31/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2353 /organism="Saccostrea cucullata" /mol_type="transcribed RNA" /isolate="Sc308-1" /db_xref="taxon:36930" /chromosome="Unknown" /tissue_type="Abductor muscle" /geo_loc_name="Australia: WA, Karratha" /collection_date="2022-03-29" gene 1..2353 /gene="LOC134279535" /note="uncharacterized LOC134279535; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:134279535" ncRNA 1..2353 /ncRNA_class="lncRNA" /gene="LOC134279535" /product="uncharacterized LOC134279535" /experiment="COORDINATES: polyA evidence [ECO:0006239]" /db_xref="GeneID:134279535" ORIGIN
tttttagctcttctgagccaaaggctcaaagagctaatgctatggccatttgtgcggtgtgcgtcgtgcggtgtgcggtgtgcggtgtgcgttaactttttagaatatgggccataactcaagaaccccttggccaatcagtgtcaaatttgtcacagggtatccttggcccaagggctaccatttatactaaaataagggttgggaccctaaaacaaggggagataatcaggaaaacaaaaccaaaagtactggttgcaaaaaaatcttcttctccagaaccaccgggcagattttcaccaaacttacatacaaggatcaggatatgttgaagattaaaaattgttcaaggcatgaccctggggcaaagggcgtggtctcaaggtcacttcaaagttgacctaaatttacaattaatgaaaatgtctatattttgcttactataaggactaggatcatcaaatcttgtaagttgatgcatcttagaacttcacatcatcttaactcaaaagtaggtcacagtgacctacttttttaattttgcaggcatttgttttcaaattgatttgaatgcatattttggacactttaaggcctatgatcattaaactttgtcagttgatgcatcttgggtccttgaacaaggtcaacttaaaagtaggtcaccgtgacctactttttgaactttatgacttatcctttttaaaacatttcatcccattatttcagacactgagagggttagaatcatcaaatcttgtaagttgctgcatcttgggacctaaaaacatatttaagtaaaagtaggtcactgtgacctacttttagaattttgcaggcatatgttttcaaattgcttaaaaggcatattttgattaccttcagaccagcgatcatcaaacttggtcagctgatgcatcttgggactctgaaaaatgtcgaccaaaatgtaggtcaccgtgacctactttcgacattttatggctatatttcagtatcttaggtatttattggcttagaatcatcaaactttgtgagttgatgcatcttgggttttcggagagtgacgaccaaaaattaggtcacggtgacctactttcaatatgttatggctatatttatgtatctccagtacttatcggcttagaatcatcaaactttgttagttgatgcatcttgggttttcagagaatgtcgaccaaaaagtaggtcacggtgacctacttttgacatttaatggctatatttatgtatttctggaacttattggcttagaatcatcaaactttgttagtttatgcctcttgggttttcagataatgtcgaccaaaaagtaggtcacagtgacctacttttgaatatctcaggtatttattggtttagaattatcaaacttggtcagcagatgcatcttaggcctctgataaatgtcaaccaaaatgtaggtcatggtgacctacttttgaatatatcaggtatttattggtttagaatcatcaaactttgtcagttgatgcatcttgggttttcggaaaatgtcgaccataaagtaggtcacgatgacctacttttgacattttatggctatattcaagtatctccggtacttactggcttagaatcatcaaactttgtcagttgatgcatcttgggttttcggaaaatgtcgaccataaagtaggtcacgatgacctacttttgacattttatggctatattcaagtatctccggtacttactggcttagaatcatcaaactttgttagtttatgcctcttgggttttcagagaatgtcgaccaaaaagtaggtcatggtgacctacttttgaatatctcaggtatttattggtttagaattatcaaactttgtcagcagatgcatcttgggactctgaaaaatgtcgactaaaatgtaggtcatgataacctactttcgacattttatggttatatttaattttctctggtacttattggcttagaatcatcaaactttgtcagttgatgcatcttgggttttccaagaatgtagaccaaaaagtaggtcaaggtgacctacttttgaatatctcaaatacatattggcttagaatcttcaatcttagtttgtctattaatgcatcttgagtcctcagaaaacttcaatcttaaagtaggtcaccgtgacctactcatgtttttttttatagctttattaaaatatcttcagtcctaattggctaagaatcatcaaactttctatcagttgatgcaacttgggttttagggtacttagggttagaggcttcaaatacaagtgataggttgtacaatttatcagaagagcgattcaaggcccttgggcctcttgtt
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]